Actinomyces howellii: NCTC11636_00116
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Entry
NCTC11636_00116 CDS
T06068
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ahw
Actinomyces howellii
Pathway
ahw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11636_00116 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahw03019
]
NCTC11636_00116 (rng)
03009 Ribosome biogenesis [BR:
ahw03009
]
NCTC11636_00116 (rng)
Enzymes [BR:
ahw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NCTC11636_00116 (rng)
Messenger RNA biogenesis [BR:
ahw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC11636_00116 (rng)
Ribosome biogenesis [BR:
ahw03009
]
Prokaryotic type
rRNA processing factors
NCTC11636_00116 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
TcdA_TcdB
Motif
Other DBs
NCBI-ProteinID:
VEG25596
UniProt:
A0A3S4T852
LinkDB
All DBs
Position
1:131056..134073
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AA seq
1005 aa
AA seq
DB search
MASSQPNETPDLLPDGDGATQPATPAPARRRRRATAAAAAPAPAPEQPRPPVPADRAEGA
SSSGAADTTDAADTTDTADTAGGPQADDLPKGGPLPEPAAPRSRPAARRRRRATAEATTP
QHAPEAAQPVLVLPDPEPGTTVETEAGTDVDENADADMNENADENADAGVDADVDADSDT
DPHADRDGDVEGAEGEEEPAQAEGRENEQDEPARLPAASLLFQAPDPARARRRRRKVTAE
TTTPQHAPAAEEAVVDEAGAQGQAPAPARGRRRRQATAPSTAPEHVEDAPAARKVRGRGP
QEGVDEPSPSEDPASSGAEEQLDPAEDGGGRRKRRRGGRGRRTRGRSEAQAQELAEDEDV
TEEARDEGQEDVESGDEDRAGTASEPEDLVDSEGQGASRRRRRRRSRTRTDAGRDVRDEV
TALKGSTRLEAKRQRRREGRAAGRRRPIVTEAEFLARRESVDRQMIVREQDGLNQIAVLE
DGLLVEHYVARHTQSSMVGNVYVGRVQNVLPSMEAAFVDLGKGRNAVLYAGEVNWDAAGM
EGRPRRIEDALSSGDTVLVQVTKDPIGHKGARLTSQVTLAGRYLVLVPGGAMTGISRKLP
DTERARLKKILKKIVPEDAGVIVRTAAEGASEEQLADDVARLVAQWEAIDKKASQILKGS
GRAPQLLKGEPELAVRVVRDVFNEDFRRLVVAGDQAWRTISQYVTELSPDLADRLEHWVS
PEDVFAAHRVDEQLAKGFDRKVWLPSGGTLVIDRTEAMTVIDVNTGRFTGAGGTLEETVT
RNNLEAAEEIVRQLRLRDIGGMVVIDFVDMVLESNRDLVLRRLVECLGRDRTRHQVTEVT
SLGLVQMTRKRVGQGLVEAFSTPCECCSGRGFIVHDTPVESGGRSEAQSQRAAGRGRGRK
AAGKGASKAKDPRDSRESGEAGDAGAVARAGQAAESGGTVEVQEAGAQDDAARAAVRGAL
AQIAAAAEQAHKENQESKESKDPQESQEPRDSGSGNGDPAAPQGR
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcccagcccaacgagacgcccgacctcctgcctgacggcgatggcgcgacg
caaccggcgacgcccgcccctgcccgtcggcgacgtcgggcgaccgccgcggcggcagcc
cccgcccccgcccccgagcagcccaggcccccggttccggccgaccgcgccgagggggcg
tcgtcctccggtgccgccgacacgaccgacgctgccgacacgaccgacaccgccgacacc
gccggtggtccgcaggcggacgacctccctaagggaggaccgctgccggagccggccgcc
ccccggtcccgtcccgcggcgcgacgtcgccgtcgggcgactgccgaggccacgaccccg
cagcacgccccggaggcagcccagcccgtcctcgtcctgcccgatccggagcccggcacc
acggtcgagacggaggccggcaccgacgtggacgagaacgcggacgctgacatgaacgag
aacgcggacgagaacgcggacgctggcgtggacgccgacgtcgatgcggactccgacacg
gatcctcatgcggaccgggacggggacgtcgagggtgccgagggtgaggaggagccggcg
caggccgaggggcgcgagaacgagcaggacgagcccgctcgcctgcctgccgcctccctg
ctgttccaggcccccgatcctgcccgtgcgcggcgcaggcgccgcaaggtcaccgctgag
acgacgaccccccagcacgccccggccgccgaggaggcggtcgtcgacgaggccggcgcc
caggggcaggcccctgcgccggcgcgcggtcgtcgccgccgtcaggccaccgccccctcg
acggcccccgagcacgtcgaggacgcaccggcggcccgtaaggtccggggccgtggcccg
caggagggggtcgacgagccgtccccgtccgaggaccccgcctcctccggtgctgaggag
cagcttgaccccgccgaggacgggggtggtcgtcgcaagcgccgtcgcggcggacgcggg
cgcaggacccggggccgcagcgaggcccaggcccaggagctcgccgaggacgaggacgtc
accgaggaggcccgggacgagggccaggaggacgtcgagtccggtgacgaggaccgtgcc
gggaccgccagcgagcccgaggacctcgtcgactccgaggggcagggcgcttcgcgccgt
cggcgccgtcggcgctcgcgcacgcggacggacgcgggacgcgacgtgcgcgacgaggtg
acggcactcaaggggtcgacccggctcgaggccaagcggcagcggcgccgggagggccgt
gcggccggccgcaggcgccctatcgtcaccgaggccgagttcctcgcccggcgcgagagc
gtcgaccggcagatgatcgtgcgcgagcaggacggcctcaaccagatcgccgtgctcgag
gacggcctgctcgtcgagcactacgtcgcccgtcacacccagtcctcgatggtcggcaac
gtctacgtcggccgggtgcagaacgtcctgccctcgatggaggcggccttcgtggacctg
ggcaaggggcgcaacgccgtgctctacgccggtgaggtcaactgggacgccgcgggcatg
gaggggcgcccccgccggatcgaggacgcgctgtccagcggtgacacggtcctggtccag
gtgaccaaggacccgatcgggcacaagggcgcacggctgaccagccaggtgaccctcgcc
gggcgctacctcgtcctggtccccggaggggcgatgacaggcatctcccgcaagctgccc
gacaccgagagggctcgtctcaagaagatcctcaagaagatcgtgcccgaggacgccggc
gtcatcgtgcgcacggccgctgagggggccagtgaggagcagctggccgacgacgtcgcg
cgcctggtcgcccagtgggaggccatcgacaagaaggcctcccagatcctcaagggctca
ggtcgggcgccccagctgctcaagggggagcccgagctcgccgtgcgcgtcgtgcgtgac
gtgttcaacgaggacttccgtcggctcgtcgtcgccggggaccaggcgtggaggacgatc
agccagtacgtcaccgagctgagcccggacctggccgaccgtctcgagcactgggtgagc
ccggaggacgtcttcgcggcgcaccgggtcgacgagcagctcgccaagggcttcgaccgc
aaggtgtggctgcccagcggcggcaccctcgtcatcgaccgtactgaggcgatgaccgtc
atcgacgtcaacaccggccgcttcaccggcgcggggggcaccctggaggagaccgtcacc
cgcaacaacctcgaggcggctgaggagatcgtgcgtcagctgcgcctgcgtgacatcgga
ggcatggtggtcatcgacttcgtcgacatggtgctggagtccaaccgtgacctcgtgctg
cgccgtctcgtcgagtgcctgggccgggaccgcactcgccaccaggtcaccgaggtcacg
agcctgggcctggtgcagatgacccggaagcgtgtcgggcagggcctggtcgaggccttc
tcgacaccctgcgagtgctgctcggggcgcggattcatcgtccacgacaccccggtggag
tccggaggccggagcgaggcccagagccagcgtgccgccgggcggggccgcgggcgcaag
gcggcgggcaagggtgcctccaaggccaaggaccctcgggactctcgggagtccggtgag
gccggggacgccggggccgtggcccgtgcggggcaggcggccgagtccggggggaccgtc
gaggtccaggaggccggtgctcaggacgacgccgccagggcggctgtgcgcggtgcgctc
gcccagatcgcagcggccgcggagcaggcgcacaaggagaaccaggagtccaaggagtcc
aaggacccccaggagtcccaggagccccgggactcggggtccgggaacggggacccggcc
gctcctcaggggcgctga
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