Actinomyces howellii: NCTC11636_00374
Help
Entry
NCTC11636_00374 CDS
T06068
Symbol
degA_1
Name
(GenBank) Degradation activator
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
ahw
Actinomyces howellii
Brite
KEGG Orthology (KO) [BR:
ahw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahw03000
]
NCTC11636_00374 (degA_1)
Transcription factors [BR:
ahw03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NCTC11636_00374 (degA_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_IclR
Peripla_BP_6
HTH_3
KR
HTH_31
HTH_Tnp_ISL3
HTH_Crp_2
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
VEG26148
UniProt:
A0A3S4RV86
LinkDB
All DBs
Position
1:438438..439442
Genome browser
AA seq
334 aa
AA seq
DB search
MAARREPTLADVADAAGVSLTTVSRVLNNRGYLSDSIKARVAAAIAELNYRPNQVARALH
GKSTQTIGVIVPTVALPFFGELAAEIENALADHGYRILVCNSMGRADREREYLDLLVSHR
VDGIISGAHNENLKEYGTVRLPLVTVDRELSPAVPNVRCANEEGGRAATELLLERGSHSP
ALLTSRTGAHNRREAGYRQVLERAGIEPVIMTVDFHTPDAERARLINAHLDAAGSQVDAV
FATDDLSAAAVLHWATGRGLEVPTDFKVVGFDGTAAVRRALPELTTIQQPIGALARTAVE
VLLTQVEAVAQGEEIGSSPSPAELPVTVLRGSTA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgccgtgaacccaccctcgctgatgttgccgacgctgccggggtctccctg
accactgtctcgcgcgtcctcaacaaccgtggctacctctcggactcgatcaaggcacgg
gtggcggcggccatcgccgagctcaactaccggcccaaccaggtggcgcgcgcgctgcac
ggcaagtcgacccagaccatcggcgtcatcgtccccacggtggccctgcccttcttcggc
gagctggcggccgagatcgagaacgccctggccgaccacggctaccggatcctcgtgtgc
aactccatggggcgggctgacagggagcgcgagtacctcgacctgctcgtgtcccaccgg
gtcgacggcatcatctcgggcgcacacaacgagaacctcaaggagtacggcaccgtgcgc
cttccgctggtcacggtcgacagggagctgtctcctgcggtgcccaacgtgcgctgcgcc
aacgaggagggcggacgtgccgccaccgagctgctgctcgagcgcggatcgcacagcccc
gccctgctcacctcccgcaccggggcccataaccgccgggaggccggctaccgccaggtc
ctggagcgcgccggcatcgagccggtcatcatgaccgtcgacttccacacccccgacgcc
gagcgagccaggcttatcaacgcccacctcgacgctgcaggttcccaggtcgacgcagtc
ttcgccaccgacgacctgtcggcggcggccgtcctgcactgggcgacgggcaggggcctg
gaggtgcccaccgacttcaaggtcgtcggcttcgacgggacggcggctgtgcgcagggcc
ctgcccgagctgacgaccatccagcagcccatcggcgcgctggctcgcaccgcggtcgag
gtcctcctcacccaggtcgaggccgtcgcccagggtgaggagatcgggtcgagcccctcc
cccgccgagctgccggtcacggtgctgcggggctcgaccgcctga
DBGET
integrated database retrieval system
