Actinomyces howellii: NCTC11636_00550
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Entry
NCTC11636_00550 CDS
T06068
Symbol
polC_1
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ahw
Actinomyces howellii
Pathway
ahw03030
DNA replication
ahw03430
Mismatch repair
ahw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11636_00550 (polC_1)
03430 Mismatch repair
NCTC11636_00550 (polC_1)
03440 Homologous recombination
NCTC11636_00550 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahw03032
]
NCTC11636_00550 (polC_1)
03400 DNA repair and recombination proteins [BR:
ahw03400
]
NCTC11636_00550 (polC_1)
Enzymes [BR:
ahw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11636_00550 (polC_1)
DNA replication proteins [BR:
ahw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11636_00550 (polC_1)
DNA repair and recombination proteins [BR:
ahw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11636_00550 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
VEG26489
UniProt:
A0A3S4R9V0
LinkDB
All DBs
Position
1:651618..653255
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AA seq
545 aa
AA seq
DB search
MGTPLREVTFVVVDLETTGGPPGAHAVTEIGAVKVRGGAVEAEFATLVNPGAAIPAQITV
MTGITNAMVVSAPPVGEALLSFLQWAQLGREATVLVAHNARFDVGHLRGAASALGLDWQE
PTVLDTLTMARKAWSRADVPNHRLGTLASFVGSPTSPTHRALDDARATVHVLHAALEALA
PLGVCHLEDLATLGDPVPARRRAKSRMADGLPATTGVYQFLSPAGQVLYVGSAVNLRRRV
RSYFTAAEKRSTVARMLDTAVGVRVIETPTEIEARVRELRLIAELDPPVNRRSRSPDRRP
WLRLVPAPEPHLASTTVLPSEEAPRAVGPFPSRSALQEAQRAAESVLRLRAWDGRGMREL
RRGEQLGGPEQALRALSGEVDLVAAPLLERIGELSAAERYEEAGLWTRRLRSLLAATVRA
ERARPLLGCPHLIAARRREAGGWELVAVRWGMLAGSALTPPGADPRPAVEALRSTAQVVQ
RPARVGGGASVEETLLLAGWALDEGARLVEVDGGEQVLEGLSWPVGAAARHERVLATGAG
FPERD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggcacaccactgcgtgaggtcaccttcgtcgtcgtcgacctcgagacgaccggcggg
ccgcccggtgcgcacgcggtcaccgagatcggggccgtcaaggtccgcggcggcgccgtc
gaggcggagttcgccaccctggtcaaccccggtgcggcgatccccgcccagatcacggtc
atgaccggcatcacgaacgcgatggtcgtcagcgccccgccggtgggagaggcgctcctg
tccttcctccagtgggcccagctggggcgggaggccacggtccttgtcgcgcacaacgca
cgcttcgacgtcggccacctgcgcggtgccgccagcgccctgggtctggactggcaggag
cccaccgtcctggacaccctcacgatggcgcgcaaggcgtggagccgagcggacgtgccc
aaccaccgcctgggcacgctcgcctccttcgtcggctcccccacctctcccacccaccgt
gcccttgacgacgcccgcgccaccgtccacgtcctccacgcggccctcgaggccctcgcc
ccgctcggagtgtgccacctggaggacctggcgactctcggagaccccgtgcccgcacgg
cgccgggccaagagccgcatggccgacgggctgccggccaccaccggcgtctaccagttc
ctgtccccggccggccaggtcctctacgtcggcagcgccgtcaacctgcgccgtcgggtc
cgctcctacttcaccgccgcggagaagcgctccacagtagcgcggatgctcgataccgcc
gtaggcgtgcgcgtcatcgagacaccgaccgagatcgaggcccgagtgcgcgagctgcgc
ctcatcgccgagctcgaccccccggtcaaccgccgctcccgctccccggaccgcaggccc
tggctacgcctcgtgcccgcgcccgagccgcacctggcctccaccaccgtcctgcccagc
gaggaggcgccccgcgccgtgggccccttcccgtcccgctcggcgctccaggaggcccag
cgcgcagcggagtccgtgctgcggctgcgcgcctgggacgggagggggatgcgcgaactg
cgccgtggcgagcagctcggcggcccggagcaggccctgcgggctctgtccggggaggtc
gacctcgtcgccgctcccctgctggagcggatcggggagctgtctgctgcagagcgctac
gaggaggcgggcctgtggacccgtcggctgcgcagcctcctggcagccaccgtgcgcgcc
gaacgtgcccgccccctcctggggtgcccccacctcattgccgcccgacggcgggaggca
ggcggctgggagctggtggccgtgcgctgggggatgctcgcgggatcggcactcaccccg
cccggtgcggacccccgcccggcggtcgaggctctgcgatccaccgcccaggtggtccag
cggccggcacgggtcgggggcggcgcgagcgtcgaggagacccttctcctggcggggtgg
gccctggacgagggcgcccggctggtcgaggtcgacggcggcgaacaggtcctggagggg
ctgtcgtggccggtgggcgcagccgcccgtcacgagcgggtactcgccaccggggccggc
ttccccgagcgggactga
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