Actinomyces howellii: NCTC11636_00890
Help
Entry
NCTC11636_00890 CDS
T06068
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ahw
Actinomyces howellii
Pathway
ahw03420
Nucleotide excision repair
ahw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11636_00890 (pcrA_1)
03430 Mismatch repair
NCTC11636_00890 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahw03400
]
NCTC11636_00890 (pcrA_1)
Enzymes [BR:
ahw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11636_00890 (pcrA_1)
DNA repair and recombination proteins [BR:
ahw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11636_00890 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
NCTC11636_00890 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
HSDR_N_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
VEG27143
UniProt:
A0A3S4RVV6
LinkDB
All DBs
Position
1:complement(1042087..1045674)
Genome browser
AA seq
1195 aa
AA seq
DB search
MSTAPTPQELASALGLHAPTDEQARVIAHRLSPLLVVAGAGSGKTATMSQRVVHLVARGA
VRPDQVLGLTFTRKATAELAQRVSARLEALGSTGVLEADPDAPEPTIATYNSFAASLVRD
HGLRIGIDPEATLITEARAWQIASEIVQARTDPLPVQTLSSAVAAVLRLDAALSENLLTI
EQAARDLEDLTALFEGLAAVRGLKTALGQAPARTAERLGMLEAVAAFQERKRSHALITFG
DQIALACRIAENVPEAAAQVRAQYPAVLLDEFQDTSVAQVRLLSALFAGSGVTAVGDPNQ
AIYGWRGASAGALDSFHTHFNPAGTAALDAGADPRQATPVLPLSTAWRNDLAVLEAANVV
SAPLRHHVPAPGDAQVTHIPVEPLRPRPAEAGVARGQVHAAFTSDPLAEAEVVADFMAER
WRPDAELAVLARVRSAFPVLAQALEARGIPYEIVGLGGMLTVPEVADVRALVTVAADPER
GDRLMRLLTGAGLGATDLRALSAHARTLARGGARTPARAQEPEAGPAEAAGHAGPTGPAE
AAGPAGPAGARTASDRSGEPGAGAREDTPLLAEAVDAVARHADAARDAAGTTGPAQRPRG
GQPRAVEGLSPAGARAVDRIARAVRRVRGALTLALPDVLVLAEQALGLDVEVAARVGNPM
GRRALDALRTIAEQYAADVPDATVVGFLTWLDVAADQENGLDAPVVEPEPGAVQLLTVHA
AKGLEWDAVAVVGLSEKSFPSYSTEPRSDLSVSDSSWMTRLDEFPHPMRSDAATLPPFEI
GALEPPNVDKEEVKVALADYRLALGRHGLAEERRLAYVAITRARHEVLLTGSHLTGTATK
PRPMSRFLAELWRRDLLSPLGPGLTDLDPEAANPLAGHSLTATWPPPDPQDDMTRARRAA
ARAVSQASAHLPGQAHRPPTGTAAPRDATGPDDTDATGPDDTQVSDGPGQVGGPRPQAGE
GAPPPGPTDPLVARWREETELLLAERARRRAERPTVVLPDHLAATKVDDLRADPDRFALD
LRRPLPPQPRAAGRLGTVFHEALATRLAEQGELISLTEAGVPDSLSRRDRDRVERWLTTA
EELPLLAGHVLTDTETELELTLAGTTLRCRLDAVFWNPATSTWLIVDWKTGRRRVPVDQL
SVYVHAWAAAHGVGTQAVRAAYVYVDPPGGQVDELRAEALLSLDQIEALLRLENG
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcacccacaccccaggagctcgcctccgccctcggcctgcacgcccccacc
gacgagcaggcccgggtcatcgcccaccggctcagcccgctgctcgtcgtggccggtgca
ggcagcggcaagaccgccacgatgagccaacgggtcgtccacctcgtcgcccgcggagcc
gtgcggcccgaccaggtcctgggcctgaccttcacccgcaaggccaccgccgagctcgcc
caacgggtcagtgcccgcctcgaggccctcggctcaactggcgtgctcgaggccgacccg
gacgcccccgagccgaccatcgccacctacaactccttcgccgcctccctcgtgcgcgac
cacggcctgcggatcggcatcgaccccgaggccaccctcatcaccgaggcccgggcctgg
cagatcgcctccgagatcgttcaggcccgcaccgacccccttcccgtccagaccctgagc
agcgccgtggcagccgtcctgcgcctcgacgccgccctgtccgagaacctcctgaccatc
gagcaggccgcccgcgacctggaggacctcaccgccctgttcgagggcctggccgccgtg
cggggcctgaagaccgcactcggacaggcacccgcccggaccgccgagcgcctgggcatg
ctcgaggcggtcgccgccttccaggagcgcaagcgctcccacgcgctcatcaccttcggg
gaccagatcgccctggcctgccgcatcgccgagaacgtccccgaggccgccgcccaggtc
cgcgcccagtaccccgcggtcctcctcgacgagttccaggacacctccgtggcccaggtc
cgcctcctgtcggccctcttcgccggctccggggtcaccgcggtcggcgaccccaaccag
gcgatctacgggtggcgcggcgcctctgccggagcgctcgactccttccacacccacttc
aaccccgccgggaccgccgccctcgacgccggcgccgacccccgccaggccacccccgtc
ctgcccctgtccaccgcctggcgcaacgacctggccgtcctcgaggccgccaacgtcgtc
tccgcacccctgcgccaccacgtccccgcccccggggacgcccaggtcacccacatcccc
gtcgagcccctgcgcccccgccccgccgaggcgggcgtggcccgcggccaggtccacgcc
gccttcacctccgacccgctcgccgaggccgaggtcgtcgccgacttcatggccgagcgc
tggcggcccgacgccgagctcgccgtcctggcacgcgtgcgctccgccttccccgtcctc
gcccaggccctcgaggcccgaggcatcccctacgagatcgtcggactgggcggcatgctc
accgtccccgaggtcgccgacgtccgtgccctggtcaccgtcgccgccgaccccgagcgc
ggagaccgactcatgcgcctgctcaccggggcgggcctgggggccaccgacctgcgcgca
ctgagcgcccacgcccgcaccctggcccgcggcggcgcgcgcacccccgcccgtgcgcag
gagcccgaggccggacccgcagaagctgccggacatgccggacccaccggacccgcagaa
gctgccggtccggctggacccgccggagcccggaccgcgtccgaccggtccggggagccc
ggagccggagcccgtgaggacacccccctgctggccgaggccgtcgacgccgtcgcccgc
catgccgacgccgcccgggacgccgcaggcaccacgggaccagcacagcgccccaggggc
ggccagcccagggccgtcgaggggctctctcctgcgggcgcccgggccgtcgaccggatc
gcccgggccgtccggcgcgtccgaggggccctcaccctggccctgcccgacgtcctcgtc
ctggccgagcaggccctcgggctcgacgtcgaggttgccgcacgggtcggcaacccgatg
ggacggcgcgctctggacgccctgcgcaccatcgccgagcagtacgccgccgacgtcccc
gacgccaccgtcgtcggcttcctcacctggctcgacgtcgcagccgaccaggagaacggg
cttgacgcccccgtcgtcgagcccgagccgggagccgtccagctcctgaccgtccacgcc
gccaagggactcgagtgggacgccgtggccgtcgtgggactgagcgagaagagcttcccg
agctacagcaccgaacccaggtccgacctcagcgtctcggactcctcgtggatgacgagg
ctcgacgagttcccccacccgatgcgctcggatgccgccaccctgccgcccttcgagatc
ggcgccctcgagccgccgaacgtggacaaggaggaggtcaaggtcgccctggccgactac
cggctcgccctgggccgccacggcctggccgaggagcggcgcctggcctacgtcgccatc
acccgcgcccgccacgaggtccttctgaccggcagccacctgaccggcaccgcgaccaag
cctcggcccatgtccaggttcctggccgagctgtggcgccgcgacctgctcagccccctc
ggtcccggtctgaccgacctcgaccccgaggccgccaaccccctggccgggcacagcctg
accgccacctggcccccgcccgacccgcaggacgacatgaccagggcacggcgggccgcc
gccagggccgtgagccaggccagcgcgcacctgccggggcaggctcaccggccgcccacc
gggacggccgcgccccgggacgcgaccggtcccgacgacaccgacgcgaccggtcccgac
gacactcaggtgtcggacggtccgggccaggtgggcggtccccgcccccaggccggcgag
ggcgccccacctcccggcccgaccgaccccctcgtggctcgctggcgcgaggagaccgag
ctcctcctggccgagcgtgcccgccgacgcgccgagcgacccacggtcgtcctgcccgac
cacctcgccgcgaccaaggtcgacgacctgcgcgccgaccccgaccgcttcgccctcgac
ctgcgccgaccgctgccgccccagccccgcgccgccggacgcctgggcaccgtcttccac
gaggccctcgccacgcgcctggccgagcagggcgagctcatcagcctcaccgaggcgggc
gtgcccgactccctgtcacgacgcgaccgcgaccgcgtcgagcggtggctgaccactgcc
gaggagctgcccctcctggccgggcacgtcctgaccgacaccgagaccgagctcgagctg
accctggccggcacgaccctgcgctgccgcctcgacgccgtcttctggaacccggcgacc
tccacctggctcatcgtcgactggaagaccggccgccgccgcgtccccgtcgaccagctg
agcgtctacgtccacgcctgggcggccgcccacggggtgggcacccaggccgtgcgcgcc
gcctacgtctacgtcgaccccccgggcgggcaggtcgacgagctgagggccgaggccctg
ctcagcctcgaccagatcgaggccctgctccgcctcgagaacggatga
DBGET
integrated database retrieval system
