Actinomyces howellii: NCTC11636_01090
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Entry
NCTC11636_01090 CDS
T06068
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ahw
Actinomyces howellii
Pathway
ahw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ahw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC11636_01090 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahw03021
]
NCTC11636_01090 (rpoA)
03400 DNA repair and recombination proteins [BR:
ahw03400
]
NCTC11636_01090 (rpoA)
Enzymes [BR:
ahw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC11636_01090 (rpoA)
Transcription machinery [BR:
ahw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC11636_01090 (rpoA)
DNA repair and recombination proteins [BR:
ahw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC11636_01090 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAP
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
VEG27558
UniProt:
A0A3S4RW54
LinkDB
All DBs
Position
1:complement(1282405..1283406)
Genome browser
AA seq
333 aa
AA seq
DB search
MLIAQRPTLSEEVIEEDRRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRIDGV
PHEFRTIAGVKEDVTQIILNIKEIVLSSENDEPVVMYLRKSGPGVVAAGDITPPAGVEIH
NPELVIATLNEKGKLEIELTVERGRGYVSANQNKDPNAEISRIPVDSIYSPVKKVSYAVE
ATRVEQRTDFDRLVVDVETKASITPRDALASAGKTLVELFGLARELNVEAEGIEVGPSPM
DQALQQDLALMIDELDLQARSSNALKREGIHTVGELVARSEADLLDIRNFGAKSISEIKE
KLAELGLSLKGSPVDYVADDDYTNPTFSDEAQA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgacccacgctctccgaggaggtcatcgaggaggaccgccgctcg
cggttcgtcatcgagcccctcgagcccggattcggctacacgctcggcaactcgctgcgc
cgaacgctgctgtcgtccatcccgggcgccgcagtgacctccgtgcgcatcgacggcgtg
ccccacgagttccgcacgatcgccggggtcaaggaggacgtcacccagatcatcctcaac
atcaaggagatcgtcctgtcctcggagaacgacgagccggtcgtcatgtacctgcgcaag
tcaggtccgggcgtcgtcgccgccggcgacatcacccctcctgcgggcgttgagatccac
aaccccgagctggtcatcgccacgctcaacgagaagggcaagctcgagatcgagctgacg
gtcgagcgcggccgcggctacgtgtcggccaaccagaacaaggaccccaacgcggagatc
tcccggatcccggtggactcgatctactcgccggtcaagaaggtctcctacgccgtggag
gccacccgtgtcgagcagcgcacggacttcgaccgcctggtcgtcgacgtcgagacgaag
gcctcgatcaccccccgcgacgcacttgcctcagcgggcaagacgctcgtcgagctcttc
ggcctcgcccgcgagctcaacgtcgaggccgagggcatcgaggtcggtccctcgccgatg
gaccaggcccttcagcaggacctcgccctcatgatcgacgagctcgacctgcaggcgcgg
tcctccaacgcgctcaagcgcgagggcatccacaccgtcggtgagctcgtcgcgcgcagc
gaggcggacctgcttgacatccgcaacttcggtgcgaagtcgatctccgagatcaaggag
aagctggccgagctggggctgtccctcaagggatccccggtcgactacgtcgcggacgac
gactacaccaaccccaccttcagcgacgaggcgcaggcctga
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