Arcanobacterium hippocoleae: RQN30_04090
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Entry
RQN30_04090 CDS
T10229
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ahx Arcanobacterium hippocoleae
Pathway
ahx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ahx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RQN30_04090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahx03021
]
RQN30_04090
03400 DNA repair and recombination proteins [BR:
ahx03400
]
RQN30_04090
Enzymes [BR:
ahx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RQN30_04090
Transcription machinery [BR:
ahx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RQN30_04090
DNA repair and recombination proteins [BR:
ahx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RQN30_04090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XCB30582
LinkDB
All DBs
Position
complement(774920..775921)
Genome browser
AA seq
333 aa
AA seq
DB search
MIIEQRPVLTEEKLSDTRSRFTLNPLEPGFGYTLGNSLRRTLLSSIPGSAVTSIHIDGVL
HEFSTIEGCKEDVAEIILNLKDLVVTSEHDEPVLMYLRKQGPGEVLASDITPPSGVEIHN
PDLVIATLNEKGKIEVDLTVERGRGYVSAQQNNSPDYEIGRIAVDSIYSPVVKVSYKVEA
TRVGQRTDFDKLIVDVETKESMAPRDAFASAGKTLVELFGLCTELNEEVEGLELKEAPVQ
EQQSSDLQRPITVLNLPARSQNCLQREGIHTLGELVLRSEADLLDIRNFGAKSIEDVKDE
LAKYDLRLKDSPAGFISGLGDDNYPMTFSDDLQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatcgaacagcgtcctgttcttaccgaggagaagctatccgatacccgctcacgt
ttcactttaaatccgcttgagccaggttttggttacactcttggaaattcgctgcgtcga
acgctgctgagctcgattcccggatcggcagttacctcgatccatatcgacggtgtgctt
catgagttctccactattgaaggctgcaaagaagatgtagctgagattattttgaatctg
aaggatcttgtagttacttcagaacatgacgaacctgtactgatgtacttgcggaagcaa
gggccaggtgaagttcttgcgtcggatattactccgccgtccggagtggaaatccacaat
cctgatctcgtgattgcaacgctcaacgaaaagggcaagattgaggttgatttgactgtt
gaacgcggccgcggctacgtttcggcacagcaaaacaattctccagattacgagattggc
cgtattgctgtagattcaatttactctccagtggttaaggtttcatacaaggtagaagcc
acccgtgtggggcagcgtacggatttcgacaagctcattgttgatgttgagaccaaggag
tcaatggctccgcgtgatgcgtttgcatctgctggaaagactcttgttgagctctttggt
ttatgtactgaattaaacgaggaggtcgaagggcttgaactgaaggaagctccagtgcaa
gaacagcagtcatcggatttgcagcgtccaattaccgtattgaatttgccggcacgttcg
cagaattgtttgcagcgcgaagggattcatacgctgggcgaattagtactccgttcggaa
gcggatttgcttgatatccggaacttcggtgcaaagtcgattgaagacgtgaaagacgaa
cttgcaaagtacgatcttcgtctgaaggattcgccagccggttttatttctggtttggga
gacgacaactacccgatgactttcagtgacgacctgcagtaa
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