Aeromonas hydrophila ML09-119: AHML_00850
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Entry
AHML_00850 CDS
T02683
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ahy
Aeromonas hydrophila ML09-119
Pathway
ahy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AHML_00850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahy03400
]
AHML_00850
Enzymes [BR:
ahy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AHML_00850
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AHML_00850
DNA repair and recombination proteins [BR:
ahy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AHML_00850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_9
Motif
Other DBs
NCBI-ProteinID:
AGM41955
LinkDB
All DBs
Position
203984..204796
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPVPGEIQELVDLTIHRVSRRAKYLL
LETDFGTAILHLGMSGSLRVLDIGTPAEKHDHVDIELANGKLLRLNDPRRFGALLWTREP
AEAHALLAKLGPEPLTDAFNADYLRERAKGRSTAIKTFLMDNQVVVGVGNIYANEALYAA
GIHPKRAAGNISAERLGTLVAEIKRVLAEAIRQGGTTLKDFTSADGKPGYFVQQLQVYGR
GGQPCFHCHTLLSEIRLGQRTTVFCSHCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccggaagtcgaagtcagccgccagggtatctcgccctggcttaccggc
atcaaggtcacccgagtggtggtgcgggacggccgcctgcgctggccggtgccgggggaa
atccaggagctggtggatctcaccatccaccgggtcagccgccgcgccaagtacctgctg
ctggagaccgacttcggcaccgccatcctccatctgggcatgtcgggcagcctgcgggtg
ctggacatcggcaccccggccgagaagcacgatcacgtggatatcgagctggccaacggc
aagctgctgcggctcaacgatccgcgccgcttcggcgccctgctgtggacccgcgagccg
gccgaggcgcacgcgctgctcgccaagctggggccggagccgctcaccgatgcgttcaac
gccgattacctgcgtgagcgtgccaaggggcgcagcaccgccatcaagaccttcctgatg
gacaaccaggtggtggtcggggtgggcaatatatacgccaacgaggcactctacgccgcc
ggcattcaccccaagcgggcggcgggcaatatcagtgccgagcggctgggcaccttggtg
gccgagatcaagcgggtgctggccgaagccatccggcagggcggcaccaccctcaaggat
ttcaccagcgcagacggcaagccgggctatttcgtgcagcagctgcaggtgtacgggcgg
ggcggccagccctgttttcactgtcacaccctgctcagtgaaatccggctgggacagcgt
acgaccgtgttctgttcccactgccagcgctga
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