Aeromonas hydrophila ML09-119: AHML_01010
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Entry
AHML_01010 CDS
T02683
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ahy
Aeromonas hydrophila ML09-119
Pathway
ahy03030
DNA replication
ahy03410
Base excision repair
ahy03420
Nucleotide excision repair
ahy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AHML_01010
03410 Base excision repair
AHML_01010
03420 Nucleotide excision repair
AHML_01010
03440 Homologous recombination
AHML_01010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahy03032
]
AHML_01010
03400 DNA repair and recombination proteins [BR:
ahy03400
]
AHML_01010
Enzymes [BR:
ahy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AHML_01010
DNA replication proteins [BR:
ahy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AHML_01010
DNA repair and recombination proteins [BR:
ahy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AHML_01010
NER (nucleotide excision repair)
GGR (global genome repair) factors
AHML_01010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGM41987
LinkDB
All DBs
Position
232136..234889
Genome browser
AA seq
917 aa
AA seq
DB search
MAPSNPLILVDGSSYLYRAFFASQQADLRTSTGLPSGAVRVMANMMRSLRKQYPDCHVAV
VFDAKGKTFRDDIYPEYKANRASMPDDLRSQVAPIHQMIKAMGFPFLMVEGVEADDVIGT
LARQATEKQLPVLISTGDKDMAQLVSDHVTLIDTMKDVKTDREGVIEKFGVPPELIIDYL
ALMGDKVDNIPGMTGVGEKTALALLQGIGSIDEIAANLDKVAALGFRGSKAFADKFREQE
EQVRLSYVLATIKTDVALEQSLEELQLGPIDKEALLAVYREYELRNLIKELESGGAEENE
AEGDDEGAAPVAAIETDYRCILDEAEFDEWLARLQVAPLFAFDTETTSLDYMEARVVGVS
FAIEPGKAAYVPFGHDYLGAPVQLTEAVVLGKLKPLLEDPARLKVGQNLKYDRNVLLNHG
IELQGIAYDTMLESYVLNSTASRHDMDSLARRYLNAETISFEEIAGKGVKQLTFNQIELE
QAAPYAAEDADITLRLHQTLWGKLSAEPGLAKVFSEIELPLLPVLARMERLGTTIEPKLL
HQQSQEIEVRLAELEKQAHELAGQEFNLSSPKQLGEILFTKLGLPIIKKTPKGAPSTAEE
VLAELAETYELPQLLMEHRGLAKLKSTYTDKLPLMIKPQTGRVHTSYHQAVAATGRLSST
DPNLQNIPVRNEQGRRIRQAFIPCAGYKLVAADYSQIELRIMAHLSGDKGLLTAFAEGKD
IHKATAAEVFGVALEAVTSDMRRSAKAINFGLIYGMSAFGLAKQLGIGRAEAQKYMDLYF
ERYPGVLEYMERTRQQADAQGYVETLFGRRLYLPDIKSRNAGLRKAAERAAINAPMQGTA
ADIIKRAMINVDGWIRGIEDQSIRMLMQVHDELVFEIREEKLEEYIAIIKEKMSAAAELD
VPLVVEAGTGDNWDQAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcccctagcaatccccttattctggtcgacggctcttcatatctttaccgcgccttc
tttgcctcccagcaggccgatctgcgcacctcgaccggtttgccgagcggcgccgtccgt
gtcatggccaacatgatgcgcagcctgcgcaagcagtaccccgactgccacgtggccgtg
gtgttcgatgccaagggcaagacctttcgcgacgacatctaccccgaatacaaggccaac
cgggccagcatgccggacgatctgcgcagccaggtcgcgcctatccatcagatgatcaag
gcgatgggtttccccttcctgatggtggaaggagtggaggccgacgacgtgatcggtact
ctggcccgtcaggcgaccgagaagcagctgccggtgctgatcagcaccggcgacaaggac
atggcgcagctggtctccgaccatgtcaccctgattgacaccatgaaggacgtgaagacc
gatcgggaaggggtgatcgagaagttcggcgtaccgcccgagctcatcatcgactacctg
gccctgatgggggacaaggtggacaacattcccggcatgaccggcgtcggcgagaagacc
gcgctggccctgctgcaggggatcggcagcatcgacgagatcgccgccaacctcgacaag
gtggctgcgctcggtttccgtggctccaaggcgttcgccgacaagttccgcgagcaggaa
gagcaggtgcgcctctcctacgtgctggccaccatcaagaccgacgtggcgctggaacag
agtctggaagagctgcagctcggccccatcgacaaagaggctctgctggcggtctaccgt
gagtacgagctgcgcaacctgatcaaagagttggagtccggcggcgctgaggagaacgaa
gccgagggtgatgatgaaggtgccgcaccggtcgccgccatcgaaaccgactatcgctgc
atcctggacgaggccgaattcgatgagtggctggcccgtctgcaggtggcaccgctgttt
gccttcgataccgagaccaccagtctcgactatatggaagcgcgcgtcgtgggtgtctcc
tttgccatcgagccgggcaaggcggcctacgtgcccttcggccacgattatctgggggcg
ccggtgcagctgaccgaggccgtggtgctcggcaagctcaagccgctgctggaagatccg
gcccgtctcaaggtggggcagaacctcaagtacgatcgcaacgtgctgctcaatcacggc
attgagctgcagggcatcgcctacgacaccatgctcgagtcctatgtgctcaactctacc
gccagccgccacgacatggattcgctggcccgcaggtatctgaacgccgagaccatctcg
ttcgaagagatcgccggcaagggtgtcaagcagcttaccttcaaccagattgaactggag
caggcggctccttatgcggcggaagatgccgacatcaccctgcgtctgcatcagacgctg
tggggcaagctctctgccgagccgggtctcgccaaggtgttcagcgagatcgaactgccc
ttgctgccggtgctggcgcggatggagcggctcggtactaccatcgagcccaagctgctg
catcagcagagtcaggagatcgaagtgcgtctggcagagttggagaaacaggctcacgag
ctggccgggcaggagttcaacctctcctcgcccaagcagctgggggagatcctcttcacc
aagctggggctgccgatcatcaaaaagactcccaagggagcgccatccactgcggaagag
gtactggccgagctggcggagacctatgagctgccgcaactgctgatggagcaccgtggg
ctggccaagctcaagtccacctacaccgacaagctgccgctgatgatcaagccgcagacc
gggcgggtgcacacctcctatcatcaggcggtggcggcgaccggtcggctctcgtccacc
gatcccaacctgcagaacatcccggtacgcaacgaacaggggcgccgcatccggcaggcc
ttcatcccgtgcgccggttacaagctggtggcggcggactactcccagatcgagctgcgc
atcatggcgcacctctccggtgacaaggggttgctgaccgccttcgccgagggcaaggac
atccacaaggcgaccgccgccgaggtgttcggggtggcgctcgaggcggtgaccagcgac
atgcgccgcagtgccaaggcgatcaacttcggcctcatctatggcatgagtgccttcggt
ctggccaagcagctggggatcggccgcgccgaagcgcagaagtacatggatctctacttc
gaacgctacccgggcgtactggagtacatggagcgcacccgccagcaagcggatgcccag
ggttacgtcgaaaccctgtttggccgccgtctctatctgccggatatcaagtcacgcaac
gccggtctgcgcaaggcggccgaacgggccgccatcaacgcacccatgcagggtacggcc
gccgacatcatcaagcgcgccatgatcaacgtggatggttggatccgcgggattgaagac
cagtcgatccgcatgctgatgcaggtgcacgatgaactggtgttcgagatccgcgaagag
aagctggaggagtacatcgccatcatcaaggagaagatgtcagccgcagccgagctggat
gtgccgctggtggtggaagcgggtaccggtgacaactgggatcaggcccactga
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