Aeromonas hydrophila ML09-119: AHML_01890
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Entry
AHML_01890 CDS
T02683
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
ahy
Aeromonas hydrophila ML09-119
Brite
KEGG Orthology (KO) [BR:
ahy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahy03019
]
AHML_01890
Messenger RNA biogenesis [BR:
ahy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AHML_01890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AGM42163
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All DBs
Position
419391..421319
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AA seq
642 aa
AA seq
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MKLTTQLVSFITLCVIAAMAMVLLGGVFSFRELGMEMQQKKVNSLVEIIDKQLEVADDHQ
DLTRWLPTLLRSAHVVELEIRQDKQRIYWFRDVQQPTDESLLIPYHQPMPHQPGMQADFK
LERPFKEFEYSIKAMSGISLGVFIVVFGLWYSIRWLRLQLRGAELLAERAQLILDNKLTK
LAHDPADEWPQPASQALDYLLAELADARKERSRFDNFIRSNAFVDKMTGIGNRLFFDNRL
ESAIMEASVMSGGVLLIELAGLEELDPELNGRQSQDLLMEASASIAAFVRKHNGALQARY
AGQVFAVLLPNMSESEMVDGASQLHKSLQRLHWPEGVNPDTAVYLGAVCYQAEDSLLKVQ
EEAELALKSARLQGHTGWFLYEKQLDEEQSSKGTVRWRTLIGRRIEEHGIDFYVQPVQQE
RDQVVLQQDLLIRIHDEQGRELQAGVFMPMAEKAGLLLPLDRLVAEQTLGLLRQRSEQSC
PISLTLCAQSLLHREFQRWLFFDLFQLPRSTNERLILQLSEAQVTRHYEALKRPLRALRM
LGCQLAIDHAGQDVVSTQYIKEFEINFLKLHPSLVREIHTRQVNQMAVRSLVGGCANTRT
RVIAVGVESGDEWKMLRHLGVHAGQGPWFAEPERLVLEPAGA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccactcagcttgtctcgtttattaccctgtgtgtcattgcggccatggcc
atggtgctgcttggcggggtgttcagctttcgtgagctgggcatggagatgcaacagaag
aaggtcaactcgctggtcgagatcatcgacaagcagctggaggtggccgacgatcatcag
gatctcacccgctggctgccgaccctgctgcgctctgcccacgtggtggagctggagatc
cgccaggacaagcagcggatctactggtttcgcgacgtacagcagccgaccgacgagagc
ctgctgatcccctatcaccagcccatgccccatcagccgggcatgcaggccgacttcaag
ctggagcggccgttcaaggagttcgagtactccatcaaggcgatgtccggcatctccctc
ggcgtcttcatcgtggtgttcggcctctggtactccatccgctggctgcggttgcagttg
cggggggccgagctgctggccgagcgcgcccagctgatcctcgacaacaagctcaccaag
ctggcccatgatccggccgacgagtggccgcagccggccagccaggccctcgactatctg
ctggccgagctggcggatgcccgcaaggagcgcagccgcttcgacaacttcatccgcagc
aacgccttcgtcgacaagatgaccggcatcggcaaccggctgttcttcgacaaccggctg
gagagcgccatcatggaggcgagcgtgatgagcggcggcgtgctgctgatcgagctggcc
gggctggaggagctggatcccgagctgaacggccgccagagccaggatctgctgatggag
gcgagcgcctccatcgccgccttcgtgcgcaagcacaacggtgccctgcaggcccgctat
gccggccaggtgtttgccgtgctgctgcccaacatgtcggaaagcgagatggtggatggc
gccagccagctgcacaagagcctgcagcggctgcactggcccgagggggtcaatccagac
accgccgtctatctcggcgcggtctgctatcaggccgaggattctctgctcaaggtgcag
gaggaggcggagctggcgctcaagagcgcgcggctgcagggccacaccggttggttcctc
tacgagaagcaactggacgaggagcagagtagcaagggcacggtgcgctggcgtaccctg
atcggccggcgcatcgaggagcacggcatcgacttctacgtccagccggtgcagcaggag
cgggatcaggtggtattgcagcaggatctgctgatccggatccacgacgagcaggggcgg
gagctgcaggccggcgtcttcatgccgatggcggagaaggcggggctgttgctgccgctg
gatcggctggtggcggagcagaccctcggcctgctgcgccagcgctccgaacagagctgc
cccatcagcctgaccctttgtgcccagagcctgctgcaccgggagtttcagcgctggctg
ttcttcgatctgttccagctgccgcgcagcaccaacgagcgcttgatcctgcaactctcc
gaggctcaggtcacccgccactatgaggcgctcaagcggccgctgcgggcgctgcgcatg
ctgggctgccagctggccatcgatcacgccggccaggatgtggtgagcacccagtacatc
aaggagttcgagatcaatttcctcaagctgcaccccagcctggtgcgcgagatccatacc
cgccaggtcaatcagatggcggtgcgcagcctggtggggggctgtgccaacacccgcacc
cgagtcatcgctgtgggggtggagagcggcgacgagtggaagatgctgcgccacctcggg
gtgcacgccgggcagggcccctggttcgccgagccggaacggctggtactggagccggcc
ggcgcctga
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