Aeromonas hydrophila ML09-119: AHML_02835
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Entry
AHML_02835 CDS
T02683
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ahy
Aeromonas hydrophila ML09-119
Brite
KEGG Orthology (KO) [BR:
ahy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahy03016
]
AHML_02835
Enzymes [BR:
ahy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AHML_02835
Transfer RNA biogenesis [BR:
ahy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AHML_02835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AGM42352
LinkDB
All DBs
Position
complement(623555..625576)
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AA seq
673 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKEKEVAEPDALLEQSVTRFVARVKMFRDRLNVVADHPLIKDAIKARVKKGLDE
KEFKEGDWVVATLKRHALVDGNFSAEITQKIASQEDHNVPWWVVLARHNLAQVEPADLPE
WKVIEEEELPRTDLTATPFFTIDGAKTKDMDDALAIRKLDNGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARISSHARLTYDDVSDWAEHGKELAIDAGVLAQLPLMKAMTEARIAWRTEHALVFPD
RPDYDFELGENGEVLAIHVEPRRIANRMVEESMIAANICAGRVLGKQVGYGIFNVHTGFD
EESLDGAIDLLKSAEAPFEKEEIASLSGFCALRRWIDNLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSLELTEHLTACRRLHR
MVERDIGDWLYVRYLKADAGTDKVFNAEIIDVMRAGLKLRLRENGAVVFMPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAVELVPGPAPVAPTSE
ADAAPADEAPKAE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgttatccgcgcctccgatcggggcttcggcttcctggaggtcgatgag
aagaccagctatttcgtgccgccgccctacatgaagaaggtgatgcacggtgaccgggtg
agcgccctgatccgtaccgaaaaagagaaggaagtggccgaaccggatgccctgctggag
cagtccgtcacccgtttcgtggcccgcgtcaagatgttccgcgaccgcctcaacgtggtc
gccgatcacccgctgatcaaggatgccatcaaggcccgcgtcaagaagggtctggacgag
aaagagttcaaggaaggggactgggtggttgccaccctcaagcgtcacgccctggtggac
ggcaacttctctgccgagatcacccagaagatcgcctcgcaggaagatcacaacgtgccc
tggtgggtggtgctggcgcgccacaacctggcccaggttgaaccggctgatttgccggag
tggaaggtgatcgaagaggaagagctgccgcgcaccgatctgaccgcgacccccttcttc
accatcgacggtgccaagaccaaggacatggacgatgccctggccatccgcaagctggac
aacggctgggagctgctggtggccatcgccgacccgaccgcttacgtggccgagggtagc
gagctggacaaggaagccgcccagcgcgccttcaccgtctacatgccgggccgcaacgtg
ccgatgatcccgcgcaccctctccgacgagctctgctccctgaaggagggcgaggagcgc
aacaccctgtgcgcccgtctgctcatcgccgaggatggcctgctgctggaagagaccgag
ttcttcgcagcccgcatcagctcccacgcccgtctcacctatgacgacgtctccgactgg
gcggagcacggcaaagagctggccatcgacgccggcgtgctggcccagctgccgctgatg
aaggcgatgacagaggcgcgcattgcctggcgcaccgaacatgccctggtgttcccggac
agacccgactacgacttcgagctgggcgagaacggcgaagtgctggccattcacgtcgag
ccgcgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgcc
ggccgcgtgctcggcaagcaggtcggctacggcatcttcaacgtccacaccggctttgac
gaagaatccctcgacggcgccatcgatctgctgaaaagcgccgaggccccgtttgagaaa
gaagagatcgccagcctctccggcttctgtgccctgcgtcgctggatcgacaacctggat
acccgctggctggacggcaagatccgccgcttccagagctatgcgctgatgtccgccgag
ccgggcgcccactacggcctggggctggatgcctacgccacctggacctcaccgatccgc
aagtacggcgacatggtcaaccatcgcctgctgaaggccgtcatcgccggcaagaccccg
ggtgagcgcccgagcctggaactcaccgagcacctgaccgcctgccgccgcctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtccgctacctcaaggccgatgccggc
accgacaaggtgttcaacgccgagatcatcgacgtgatgcgcgccggcctcaagctgcgt
ctgcgcgagaacggcgctgtggtgttcatgcccgcccgccatatcctggacaacaaggat
cggctggagtgcaactgggacaatggtcgcgtctatctggacaagaccgaggtggtctac
gagctcggccagatcatcgaggtcaagctgaccgaagcggtggaagagacccgctccctc
atcgccaagccggcggtggagctggtgccgggcccggcgccggtcgccccgaccagcgaa
gccgatgccgcgcctgccgacgaggcccccaaggccgaataa
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