Aeromonas hydrophila ML09-119: AHML_10725
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Entry
AHML_10725 CDS
T02683
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ahy
Aeromonas hydrophila ML09-119
Pathway
ahy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AHML_10725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahy03400
]
AHML_10725
DNA repair and recombination proteins [BR:
ahy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AHML_10725
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AHML_10725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF87
Kinesin
UB2H
Microtub_bd
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGM43927
LinkDB
All DBs
Position
2377930..2379942
Genome browser
AA seq
670 aa
AA seq
DB search
MSKLFQLASQFQPAGDQPRAIAQLLDGIESGLAHQTLLGVTGSGKTFTMANVIATLNRPT
MILAPNKTLAAQLYGEMKEFFPDNSVEYFVSYYDYYQPEAYVPTTDTFIEKDASINDHIE
QMRLSATKALLERRDVVIVASVSAIYGLGDPQAYLSMMLHLKVGDLINQRDILRRLAELQ
YTRNDIAFQRGTFRVRGEVIDIYPAESDKLALRVELFDEEVERLSLFDPLTGAIEQTVVR
YTIYPKTHYATPRETILGAIEHIKEELKSRREQLLSLGKLVEEQRISQRTQFDIEMMQEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPGDGLLIIDESHVTVPQIGAMFKGDRSRKET
LVEYGFRLPSALDNRPLKFDEFEALMPQTVFVSATPGPYELEKSGGDVVQQVVRPTGLLD
PEIEVRPVTTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTEYLADHEVRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTRSLIQTIG
RAARNLNGKVILYGDTITNSMQVAIEETERRRALQHAHNLEHGITPTGLNKSVGDVMDMG
GSRSAGKSGRGSRKAAEPQGEYHARSASEISKEIKRMEEQMFQHARDLEFEQAAALRDQI
QRLRNELIES
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagttattccagctggccagccagtttcaacccgccggggatcagccaagggcc
atcgcccagctgctcgatggcatcgaatccggccttgcccatcagaccctgctcggggtg
accggctcgggcaagaccttcaccatggccaacgtcatcgccaccctcaatcgccccacc
atgatcctggctcccaacaagaccctggcggcccagctctatggcgagatgaaggagttc
ttccccgacaactcggtggagtatttcgtctcctattacgactactaccagccggaagcc
tacgtgccgaccaccgacaccttcatcgagaaggatgcctccatcaacgatcacatcgag
cagatgcggctgtcggccaccaaggcactgctggagcgccgcgatgtggtgatcgtcgcc
tcggtgtcggccatctacggtctgggagacccgcaagcctacctcagcatgatgctgcac
ctgaaagtgggggacctgatcaatcagcgggatatcctgcgccgtctcgccgagctgcag
tacacccgcaacgacatagccttccagcgcggcaccttccgggtgcggggggaggtgatc
gacatctaccccgccgaatcggacaagctggccctgcgggtggagctgtttgatgaggag
gtggagcgcctctccctgttcgatccgctgaccggtgccatcgagcagacggtggtgcgc
tacaccatctatcccaagacccactatgccaccccgcgcgagaccattttgggggccatc
gagcacatcaaggaggagctcaagagccgccgtgagcagctgttgtcgctgggcaagctg
gtggaggagcaacgcatcagtcagcgtacccagttcgacatcgagatgatgcaggagctg
ggctactgctcgggcatcgaaaactacagccgttacctctccggtcgcgcccccggcgag
ccgccgcccaccctgtttgactatctgccaggggacggcctgctcatcatcgacgaatcc
cacgtcacggtgccgcagatcggcgccatgttcaaaggggacagatcccgcaaggagacc
ctggtggagtacggcttccggctcccctcggcgctcgacaaccggccgctcaagttcgac
gagttcgaggcgctgatgccgcagacggtgtttgtctcggccacccccggcccctacgag
ctggagaagtccggcggcgatgtggtgcagcaggtggtgcgccccaccggcctgctcgac
cccgagatcgaggtacgtccggtcaccacccaggtggacgacctgctctccgagatccgc
aagcgggtggcggtggaggagcgggtgctggtcaccaccctcaccaagcggatggcggag
gatctgaccgaatacctggcggatcacgaggtaagggtgcgttatctgcactcggacatc
gacaccgtcgagcgggtggagatcattcgggacctgcgcctcggcaagttcgacgtgctg
gtggggatcaacctattgcgagaggggctcgatatgccggaggtctcgctggtggcgatc
ctggatgcggataaagagggtttcctgcgctccacccgctccctcatccagaccatcggc
cgggcggcgcgcaacctcaacggcaaggtcattctctacggggataccatcaccaactcc
atgcaggtggcgatcgaagagaccgagcggcgccgcgccctgcagcatgcccacaacctc
gaacatggcatcaccccgacggggctcaacaagtcggtgggagatgtgatggacatggga
ggcagtcgcagtgcgggcaagagcgggcggggcagccgcaaggccgccgagccgcaaggg
gagtaccatgcccgctccgccagcgagatcagcaaggagatcaaacggatggaagagcag
atgttccagcatgcacgggatctggagttcgagcaggcggcagcgctgcgggaccagatc
cagcggctgcgcaacgagttgatcgagagttga
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integrated database retrieval system
