Aeromonas hydrophila ML09-119: AHML_11845
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Entry
AHML_11845 CDS
T02683
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ahy
Aeromonas hydrophila ML09-119
Brite
KEGG Orthology (KO) [BR:
ahy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahy03019
]
AHML_11845
Enzymes [BR:
ahy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AHML_11845
Messenger RNA biogenesis [BR:
ahy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AHML_11845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
nSTAND3
AAA_22
ResIII
AAA_23
AAA_30
PhoH
NTPase_1
WHD_HA2
NACHT
TsaE
T2SSE
AAA_11
SLFN-g3_helicase
nSTAND_NTPase5
AAA_25
DUF6145
ABC_tran
SRP54
Motif
Other DBs
NCBI-ProteinID:
AGM44149
LinkDB
All DBs
Position
complement(2630452..2634306)
Genome browser
AA seq
1284 aa
AA seq
DB search
MNLDARRLSSRLHGAKKLPEGKQAAVLETISADLIAAEQRYQSRLAGVPKVTYPDNLPVS
QKQAEIAKAIEEHQVVIIAGETGSGKTTQIPKICLALGRGVKGFIGHTQPRRLAARTVAA
RIAEEMESELGHYVGYKVRFTDQVSEQTHIKLMTDGILLAEIQNDRMLTQYDTIIIDEAH
ERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPQRFSRHFNKAPVIEVSGRTYPVEVRY
RPLTSDKSEGLEERDELQGIFDAVEELAREGLGDILIFMNGEREIRDTADALRKLNLRDT
EVLPLYARLSNAEQNKVFQQHAGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSWRT
KVQRLPIEPVSQASANQRKGRCGRVADGICIRLYSEEDFNGRPAFTDPEILRTNLASVIL
QMLALGLGNMEAFPFVEPPESRHIKDGLTLLKELEAVRELPATGDREAKLQLTETGRQLS
RIPLDPRLAKMVISAAQTGCLSEVMVITSALSIQDPRERPMEKKQAADEQHRRFEDKDSD
FLAFVNLWNYLKEQQDALGSNPFRRMCQKEFLSYLRVREWQDIHFQLRQTVKELGFKANH
EPADFKTVHCALLTGLLSHIGNKDLEKPEFLGARNGRFHLFPASGLFKKPPKWVMAAELV
ETSRLYARINAKIEPEWVEPLAGHLIKLHHSDPHWSKKNGAVMAKEKVTLYGLTLVNERT
INFSRIDPALCRELFIRRALVEGDFETRHRFFSDNRKLLAEVEALEHKSRRRDILVDDED
LFRFYDARLPEEVISARHFDKWWKEAQKRDAELLNFEKEMLMKGDAAHISDLDYPNFWQQ
GRLKLKLTYQFEPGEAADGVTLHIPLPLLNQVEVKGFEWLIPGLRHELLVALIKSMPKPM
RKNFVPAPNYADALLASINPEQGPLLDEMERQLRRMTGVTVPRESWDWAAVPDHLKLTFR
VVDDKHKKVAEGKDLEALKESLRGKVQETLSQVADDDIEQSGLTLWSFGELPQEYSQKRG
GFEVKAYPALVDQKDSVAIQLVESPVVQQQLMWAGQRRLVLLNVPSPIKYLQEKLPNKAK
LGLYFNPFGKVAELIDDCIACGCDKLIEQHGGMAWDEAGFEALKEYVRAELNDAVVEVAK
QVEAVLTLSHEIKKRLKGKMQLDTAFAMSDIQQQLGNLIHKGFVTETGWQRLPDLLRYLR
AIERRLEKLAIDPNRDRVYMLKVHSVESEYKGLLAKIPKSQLIPSEVANIRWMIEELRVS
FFAQNLGTPYPVSDKRVLNAIAQC
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgacgctcgccgtctatccagccgtctgcacggggccaagaagctgcccgag
ggcaaacaggctgccgtgcttgagaccatttcagctgacttgatcgccgccgaacagcgc
tatcagtcccgtttggcgggtgtgcccaaggtcacctatccggacaacctgccggtcagc
cagaagcaggcggagatcgccaaagccattgaagagcaccaagtagtgatcatcgccggc
gaaaccggctcgggcaaaaccacccagatccccaagatttgtctggcgctcgggcgcggg
gtgaagggcttcatcggccacacccagccaagacgtctggcggcccgcaccgtggcggcc
cgtattgcagaggagatggaatccgagctcggccactacgtgggctacaaggtgcgcttt
accgatcaggttagcgagcagacccacatcaagctgatgaccgacggtatcctgctggcg
gagatccagaacgaccggatgcttacccagtacgacaccatcatcatcgatgaggcccac
gagcgcagcctcaacatcgacttcattctcggctatctcaagcagttgctgccaaggcgc
cccgacctcaaggtgatcattacctcggccaccatcgaccctcagcgcttctcccgccat
ttcaacaaggcaccggtgatcgaggtctccggtcgcacctacccggtagaggtccgttat
cgtccgctcaccagtgataaaagtgaagggctggaggagcgcgacgagctgcaggggatc
ttcgatgcggtggaagagcttgcccgcgaagggctgggggacatcctcatcttcatgaat
ggcgagcgggagatccgcgataccgccgatgccttgcgcaagcttaacctgcgcgatacc
gaggtgctgcctctctacgcccgcctctccaacgccgagcagaacaaggtgttccagcag
catgccgggcggcgcatcgtgctcgccaccaacgtggcggagacctcgctgacggtgccg
ggcattcgttacgtcatcgatccgggtactgcccgcatcagccgttactcctggcgcacc
aaggtgcagcgcctgcccatcgagccggtttcccaggccagtgccaaccagcgtaaaggt
cgttgcggtcgggtggcggacggtatctgtatccgtctctactccgaggaggatttcaac
ggccgtccggccttcaccgaccccgagatcctgcgcaccaacctggcctccgtcatcctg
cagatgctggcgctcggccttggcaacatggaggcgttccccttcgtcgagccgcccgag
tcacgccatatcaaggacggcctgaccctcttgaaagagctggaggcggtgcgcgagctg
cccgccaccggcgatcgcgaagcgaaactgcagctgaccgagaccggtcgccagctctcg
cgtatcccccttgatccgcgtctggcgaagatggtgatcagcgcggcgcagactggctgc
ctgagcgaggtgatggtgatcacctctgctctcagcattcaggatccccgcgagcggccc
atggagaagaagcaggccgctgacgagcagcacagacgttttgaagacaaggattccgac
ttcctcgcctttgttaacctctggaactatctgaaagagcagcaggatgcccttggcagc
aacccgttccgccgcatgtgccagaaggagtttctctcctacctgcgggtgcgcgagtgg
caggacattcacttccagctgcgtcagacggtgaaagagcttggttttaaagccaaccat
gaaccggcggatttcaagacggtgcactgcgccctgctgaccggcctcttgagccacatc
ggcaacaaggatctggaaaagcccgaattcctcggggcccgcaacggtcgtttccacctg
ttcccggcctcgggtctgttcaagaagccgcccaagtgggtgatggccgccgagttggtg
gagacctcgcgcctctacgcccgcatcaacgccaagatcgaacccgagtgggtagagcca
ctggcaggtcacctcatcaagctgcaccacagcgacccccactggtcgaagaaaaatggc
gccgtgatggccaaggagaaggtgactctctatggcctgaccctggtcaacgagcgcacc
atcaacttcagccgtatcgacccggcgctgtgccgtgagctgtttatccgccgcgccctg
gtggagggggatttcgagacccgccaccgtttcttcagcgataaccgcaagctcctggcc
gaggtagaggcgctggagcacaaatcccgtcgtcgcgacattctggtggatgatgaggac
ttgttccgcttctacgatgcccgcttgccggaggaggtgatctccgcccgccatttcgac
aagtggtggaaagaggcgcaaaagcgggacgcagagctgctcaacttcgaaaaagagatg
ttgatgaagggggatgcggcccacatcagcgatctcgactaccccaacttctggcagcag
gggcgcctcaagctcaagctgacctatcagttcgagccgggggaggccgccgatggcgtg
accctgcatattccgctgccgctgctgaatcaggtagaggtgaaggggttcgagtggttg
atcccggggctgcgtcacgagctgttggtggccctcatcaagtcgatgccaaagccgatg
cgcaagaacttcgtaccggcccccaactatgccgatgcgctgctcgccagcatcaacccc
gaacaggggccgctgctggacgagatggagcgtcagctgcgccggatgactggcgtgacc
gtgccccgtgaatcctgggactgggctgcggtgcccgatcacctgaaactcaccttccgg
gtggtggacgacaaacacaagaaggtggcggaaggcaaagatctggaggcattgaaagag
tcgctgcgcggcaaggtgcaggagaccctgtcacaagtggcggacgatgacatcgagcag
tctggtctcaccctgtggagctttggcgagctgccgcaagagtacagtcagaagcgcggc
ggcttcgaggtgaaggcctacccggccctggtggatcagaaggattcggtcgccatccag
ctggtggagagcccggtggtgcagcagcagctgatgtgggctggtcagcgccggctggta
ctgctcaacgtgccatcccccatcaaatacctgcaggagaagctgcccaacaaggccaag
ctggggctctattttaacccgtttggcaaggtggccgagcttatcgatgactgcattgcc
tgcggctgtgacaagctgattgagcagcacggtgggatggcttgggacgaggccggtttc
gaggcactcaaggagtatgtccgcgccgagctcaacgatgcggtagtggaagtggccaag
caggtggaggccgtgctgaccctctcccatgagatcaagaaacggctcaagggcaagatg
cagctcgacaccgcctttgccatgtccgatatccagcagcagctcggcaaccttatccac
aagggctttgtcaccgagaccggctggcagcggctgcctgacttgctgcgctacctgcgg
gccatcgagcggcgcctggagaagctcgccatcgatcccaaccgggatcgggtctacatg
ctcaaggtgcatagcgtggagtctgagtacaaggggctgctggccaagatccccaaatcc
cagcttattccctccgaggtggccaatattcgctggatgatcgaggagctgcgggtgtcg
ttttttgcccagaatctgggaaccccctatccggtctccgataaacgggtgctgaacgct
atcgctcagtgctaa
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