Aeromonas hydrophila ML09-119: AHML_14415
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Entry
AHML_14415 CDS
T02683
Name
(GenBank) DEAD box family ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ahy
Aeromonas hydrophila ML09-119
Pathway
ahy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AHML_14415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahy03019
]
AHML_14415
Enzymes [BR:
ahy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AHML_14415
Messenger RNA biogenesis [BR:
ahy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AHML_14415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NACHT
UvrD-helicase
P-loop_SecA
AAA_22
AAA_19
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGM44653
LinkDB
All DBs
Position
complement(3259282..3260577)
Genome browser
AA seq
431 aa
AA seq
DB search
MRFESFDFAPEILRAISECGYQEMTPVQQQAIPAIRRGRDVLASAQTGTGKTAAFALPIL
QRLVDNPAPVQPSNARVLILTPTRELAAQVASNINDFAKHLDITTLTIYGGGKQDVQARK
LKAGAHIIVATPGRLLEHLTACNLSLSGVECLVLDEADRILDMGFSADVQQILQAVNKTR
QNLLFSATFSEAVKKLANLMLDKPQIVSVNKQNSTADTVSHTVYPVEQKRKRELLSELIG
KQNWPQVLVFASTRESCDELVAELNLDGIKSAVVHGDKAQGSRRRALREFTEGKLRVLVA
TEVAARGLDIPDLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGMAISFVSREEERTLLEIE
ALIGQKIRRIMVPGYEVSSRDELIKQLQERRRFGKRPQREDNAAAQAMAEAKLQGQRLKR
LAAAKKPRQPK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgaatcgttcgattttgcccccgagattttgcgcgccatctcagagtgcggt
tatcaggagatgacccctgtgcagcagcaggcgatcccggccatccgccgtggtcgtgac
gtgctggccagcgcccagaccggcaccggcaagaccgccgcctttgccttgcccatcctg
cagcggctggtggacaaccccgcaccggtgcagccgtccaatgcccgggtgctgatcctg
accccgacccgcgagctggcggcccaggtggcgagcaatatcaatgacttcgccaagcat
ctggatatcaccaccctcaccatctacggcggtggcaagcaggatgtgcaggccagaaaa
ctgaaagcgggcgctcacatcatagtggcgaccccgggccggctgctggagcacctcacc
gcctgcaacctgagcctctccggtgtcgagtgcctggtgctggatgaagcggaccgcatc
ctcgacatgggcttcagtgccgatgtgcagcagatcctgcaagcggtcaacaagacccgt
cagaacctgctgttctccgccaccttctccgaggcggtgaagaagctggccaacctgatg
ctggacaagcctcagatagtgagcgtcaacaagcagaactccaccgccgataccgtcagc
cacaccgtctatccggtggagcagaagcgcaagcgcgagctgctctccgagctcatcggc
aagcagaactggccgcaggtgctggtgtttgccagtacccgcgagagctgcgacgagctg
gtggccgagctgaacctcgacggcatcaagtccgccgtggtgcacggcgacaaggctcag
ggcagccgtcgccgcgccctgcgcgagttcaccgaaggcaagctgcgggtgctggtggcc
accgaagtggccgcccgtggcctggacatcccggacctcgagtacgtggtcaactatgat
ctgccgttcctggcggaagactacgtgcaccgcatcggccgtaccggccgcgccggcaag
agcggcatggccatctccttcgtcagccgcgaggaagagcgcaccctgctggagatcgag
gcactgatcggccagaagatccgccgcatcatggtgccgggctacgaggtgagcagccgc
gacgagctgatcaagcagctgcaggagcgtcgccgcttcggcaagcgcccgcagcgggaa
gacaacgccgccgcccaggccatggccgaggccaagctgcagggccagcgcctcaagcgc
ctggctgccgccaagaagccgcgccagccgaaataa
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