Aeromonas hydrophila ML09-119: AHML_17495
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Entry
AHML_17495 CDS
T02683
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ahy
Aeromonas hydrophila ML09-119
Pathway
ahy03410
Base excision repair
ahy03430
Mismatch repair
ahy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AHML_17495
03430 Mismatch repair
AHML_17495
03440 Homologous recombination
AHML_17495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahy03400
]
AHML_17495
DNA repair and recombination proteins [BR:
ahy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AHML_17495
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AHML_17495
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AHML_17495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
bHLH_IRO3
Motif
Other DBs
NCBI-ProteinID:
AGM45267
LinkDB
All DBs
Position
complement(3973129..3974859)
Genome browser
AA seq
576 aa
AA seq
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MPLQIRRRPRVDDSHLPATLHPLLRQIFASRGVEDPALLERSASQLLPPQRLFGMAQAVP
LLAEALTAQKRILIVGDFDCDGATSSALCVLALRAMGGRHIDFLVPNRFEFGYGLTPEIV
ELAVARGAEFLITVDNGISSIAGVAAAKAAGMQVLVTDHHLPGQELPDADAIVNPNQHGC
DFPSKSLAGVGVAFYLMAALNTQLRQSGWYERQGLRAPNVADYLDLVALGTVADVVALDG
NNRILVHQGLQRIRAGRCRPGIQALVDVSGRDGRRLCAADLGFALGPRLNAVGRLDDMSL
GVACLLSEDINLARQLASEMDSLNQERKEIEQGMQQEALATLEQIRFRDGEVPSGIVLHR
DEWHQGVVGLVASKVKEKYYRPVIAFAESSETELKGSGRSIPGVHLRDALELLDTRHPGL
MGKFGGHAMAAGLTLPKANIEAFGRAFEAVISELVTPELLTGVLLTDGELLPDELSLELA
ELIRASGPWGQAFPEPLFDGEFVLVQQRLVGEKHLKMMLTTDSGHAVDAIAFGVDLQRWP
DASVKRVRLVYRLDVNEWRGNRSVQLLVEHLEAAGL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcaaatccgtcgtcgtccgcgagttgatgattcccatctgcccgccaccctg
cacccgctgcttcgtcaaatcttcgccagccgcggggtcgaagatcccgctctgctggag
cgcagcgccagccagctgctgccgcctcagcgtctgttcggcatggcgcaggcggtgccg
ctgctggccgaggcgctgacggcgcaaaaacgcattctcatcgtcggtgattttgactgc
gacggcgccaccagctcggccctgtgcgtgctggccctgcgcgccatgggcggtcgccac
atcgatttcctggtgcccaaccgcttcgagttcggttatggcctcaccccggagatcgtc
gagctggcggtggcccgtggcgccgagttcctgatcacggtggacaacggcatctccagc
atcgccggggtggcggcggccaaggcggccggcatgcaggtactggttaccgatcaccat
ttgccgggccaggagctgcctgacgccgatgcgatagtgaatcccaaccagcatggctgc
gactttccctccaagtcgctggccggggtcggggtcgccttctatctgatggcggccctc
aacacccagctgcgccagagcggctggtatgagcgccaggggttgcgcgcgcccaacgtg
gcggattatctcgatctggtggcgctcggcaccgtggccgacgtggtggcgctggatggc
aacaaccgcatcctggtccatcagggtttgcagcggatccgggccggccgttgccgtccc
ggcatccaggcgctggtggacgtgtcgggtcgtgacggtcgtcgcctgtgcgccgccgat
ctcggctttgcgctggggccgcgcctcaacgcggtgggccggctcgacgacatgtcgctc
ggggtcgcctgcctgctgagcgaggacatcaacctggcgcgccagctcgcctccgaaatg
gacagcctcaaccaggagcgcaaggaaatcgagcaggggatgcagcaggaggcgctcgcc
accctggagcagatccgttttcgtgacggcgaggtgccatccggcatagtgctgcaccgg
gacgagtggcatcagggggtggtggggctggtggcctccaaggtgaaagagaagtactac
cgcccggtcatcgcctttgccgagagcagcgagaccgagctcaagggctccgggcgctcc
atcccgggggtgcacctgcgcgatgcgctggaactgctcgacacccgccaccccggcttg
atgggcaagtttggcggccacgccatggcggctggactgaccctgcccaaggccaatatc
gaggccttcggccgggccttcgaggcggtgatcagtgagctggtgacgcctgagctgttg
accggggtgctgctcaccgatggcgagctgctgcccgatgaactgagtctggagctggcg
gagctgatccgcgcctccggcccctggggtcaggccttccccgagccgctgtttgacggc
gaattcgtgctggtgcagcagcggctggtgggggagaagcacctcaagatgatgctgacc
acggattccggccacgcggtggatgccatcgcctttggcgtcgacttgcagcgctggccc
gatgcctcggtgaagcgggtgcgactggtctatcggctcgacgtcaacgagtggcgcggc
aaccgcagcgtgcagctgctggtggagcatctggaggccgccggcctctga
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