Aeromonas hydrophila ML09-119: AHML_21015
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Entry
AHML_21015 CDS
T02683
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ahy
Aeromonas hydrophila ML09-119
Pathway
ahy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AHML_21015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahy03400
]
AHML_21015
Enzymes [BR:
ahy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AHML_21015
DNA repair and recombination proteins [BR:
ahy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AHML_21015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
UvrD-helicase
AAA_22
AAA_16
nSTAND3
CbiA
AAA_28
NTPase_1
SRP54
SLFN-g3_helicase
T2SSE
TraI_hel_assoc_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AGM45959
LinkDB
All DBs
Position
complement(4722963..4725002)
Genome browser
AA seq
679 aa
AA seq
DB search
MNGTMMIERLKALALAGRIRQLDLQFARLVADLGGSPELVLGAALACFELGRGHVCLPLE
MIIAGSLRPFGLDPEQSRDLLADLVDPARWLALFAESPLVGTEQDDGLAPRWPLRLWHGR
LYLTRYHDFEHGVARHLRALGERAEWPEIAPALSRLFARDYGLVFGALLKARLAPDFSAR
HFIEKYLDLVFPSEVDWPAIEALLASAQAASDLSVLDALVPEALCCNGQKLAAATAAARP
FAVISGGPGTGKTTTVAKLLAILVETGLQAGKAPAIRLVAPTGKAAARLTESIGSALQAL
DLPPEWVEAIPTEAGTLHRLLGVIPGRSQFRHHAGNPLHLDLLVVDEASMVDLPMMARLL
DALPSHARLILLGDKDQLASVEAGAVLGDICSFIEQGISPAQADWLSRQTGYRLQGSPAG
TPVRDSLCLLAKSWRFDQHSGIGQLARACNSGDATAVEAVWGAGFADISLHPWAGDAYDA
LIAQGVAGYGAYLKAARAGEDPAAVFKAFNSFQILCALRDGPFGVEGLNERLELALSRAS
LIARDGDWYAGRPVMVVRNDHGVGLYNGDMGLCLPDESGRLKVWFEQPDGTLRALLPSRL
PPHETVYAMTIHKSQGSEFAHTVLVLPDSPSPLLTRELVYTGITRAKARLDLYGDRALLA
QAVRKKTERYSGLAERLGE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaccatgatgattgaacgactcaaggccctggcgctggcgggccgcatccgc
cagctggatctgcaatttgccaggctggtggccgatctgggcggcagccccgagctggtg
ctgggggcggcgctcgcctgcttcgagctggggcgcggccatgtttgtctgccgcttgaa
atgatcatcgccggatctttgcgcccgttcgggctggatccggagcagagccgggatctg
ctggccgatctggtggatcctgcccgctggctcgccctgtttgcagagagtccgctggtt
ggcactgagcaggatgacgggctcgccccgcgctggccgctgcggctgtggcacgggcgg
ctctacctcacccgctaccacgactttgagcatggggtggcccgccatctgcgcgccttg
ggtgaacgcgccgaatggccggagatagccccggccctgtcgcggctgtttgcccgcgac
tatggcctggtgttcggggcgctgctcaaggcccgcctcgcccccgacttttcggcccgc
cactttatcgagaaatatctggatctggtgttcccgagcgaggtggattggcccgccatc
gaggcactgctggccagcgcccaggcggcgagtgacctgagtgtgctggatgcgctggtg
cccgaggcgctctgctgcaacggccagaagctggcggcggccaccgcggcggcgcgcccc
tttgcggtgatctccggcggccccggcaccggcaagaccaccacggtcgccaagctgctc
gccattctagtggagaccggcctgcaagcgggcaaggccccggcgatccggctggtggcc
cccaccggcaaggcggcggcgcgcctcaccgagagtatcggctctgccctgcaggccctg
gatctgccccccgaatgggtcgaggcgatccccaccgaggcaggcaccttgcaccggctg
ctcggggtcattccggggcgcagccagttccgccaccatgcgggcaacccgctgcatctg
gacctgctggtggtggatgaggcctccatggtcgacttgccgatgatggcgcgcctgctc
gatgcgctgccgagccacgcccgcctgatcctgcttggcgacaaggatcagctcgcctcg
gtggaggcgggggccgtgctcggcgatatctgcagctttatcgagcagggcatcagcccg
gcgcaggcggactggctatcccgccagaccggctaccgcttgcagggctcgcccgctggg
actccggtgcgcgacagcctctgtttgctggccaagagttggcgctttgatcagcattcg
ggcatcggccagctggcgcgcgcctgcaacagtggcgatgccacggcggtggaagctgtc
tggggcgcaggattcgccgatatcagcctgcacccctgggccggggatgcctacgatgcc
ctgattgctcagggggtggccggttatggtgcctatctgaaggcggcccgcgcgggggaa
gatcccgccgccgtgttcaaggcattcaacagcttccagatcctctgcgccctgcgcgat
ggcccgtttggggttgaggggcttaacgagcggcttgaactggccctgtcacgggccagc
ctgattgcccgcgatggcgactggtatgccggtcgcccggtaatggtggtgcgcaacgac
cacggggtcggcctctacaacggcgatatggggctctgcctgccagatgaaagcgggcgg
ctcaaggtgtggtttgagcagccggacggcaccctgcgggcgctgttgcccagccgcttg
ccgccccacgagacggtttacgccatgactatccacaaatcccagggctcggagtttgcc
cataccgtgctggtgttgcccgacagccccagcccgctgctgacccgtgagctggtctat
accggcatcacccgcgccaaggcccgcctcgatctctacggcgatcgcgccctgctggcc
caagcggtgcggaaaaagaccgagcgttattccggattggcggagaggttgggggagtga
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