Aeromonas hydrophila ML09-119: AHML_21020
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Entry
AHML_21020 CDS
T02683
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ahy
Aeromonas hydrophila ML09-119
Pathway
ahy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AHML_21020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahy03400
]
AHML_21020
Enzymes [BR:
ahy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AHML_21020
DNA repair and recombination proteins [BR:
ahy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AHML_21020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Biotin_carb_C
Motif
Other DBs
NCBI-ProteinID:
AGM45960
LinkDB
All DBs
Position
complement(4724999..4728604)
Genome browser
AA seq
1201 aa
AA seq
DB search
MANPLNTLRFPLYGERLIEASAGTGKTYTIAGLYLRLLLGHGPLIEEGEDAGQPSAHERP
LSVTEILVVTFTEAATAELRGRIRARIHEARLAFMRGESKDALLSQLLVEVEDHELAARR
LLAAERQMDEAAVFTIHGFCQRMLKQNAFESGALFETEFLTDDSQLRLQAVSDYWRSEFY
PVDKPLASAVRALWPSPAALLREMGSWLDNSELEMRPPAGDETLAARHQAAMARIEAVKR
EWLAQGDEIRRQTDGQVSRYTGKNYEGWLAKIADWAQDEASGYAIPKELERFGQTVLEEN
LKKGGAVPTLPLFSQIDALLASRPGIRDLILQRAAVVVRSRMQASKRQAHQLSFDDLLKD
LDGALCSGLGERLCERIRATYRVAMIDEFQDTDPQQYRIFHRLYGGHTDTALLMIGDPKQ
AIYGFRGADIFTYIQARRNVSAHYTLGRNWRSSRALVAAVNGLFERAKDPFIYEADIPFL
PVEAQGKSKALQLDGEVAPVLHCWQLSGQPTFNKGDYQSRMARATAVEIHRLLTLARAGK
AQIGDQPVKAGDIAVLVRTGAEGKLVQQELARLAIASVYLSNRESVLEQTEAREILLILH
ACQNPSEERSLRAALATGLFDLDAKALDGLASDERAWESAVQEFLEYRKIWHRRGVLAML
RALLHRRNLASSLLASPYGERRLTNFLHLGELLQQVSSELDGEYALLRWLGEAVSRPNGQ
DAEQVLRLESERKLVQIVTIHKSKGLEYPLVFLPFICSHRTAETPLYHESDETGNHTILD
LTGAEGSLAEADRERLAEDLRLLYVALTRGVYATWLGLAPVRAGAGKSEKTDLHHTAIGY
LLQKGEEGDAQTLATALTELAQALPGVAVGEPSLTRPAPLPPEEEQLGEPQVRHFSGTLE
RDWWISSYSGLAAQGHGHSKGVLANPGFDDEVVTEAAALASEQAEEAPQPSIFTFPKGAR
PGTLLHSLFETIDFQRAEGEPLAEHIATLLAQDGFDESWAQVLQQQVEAVLDTPLETGFG
EPVRLRDLAPERKQVELEFFLPMGRVTAPALTAICQQHDPLSRGNKPLSFATVQGMLKGF
IDLVFEWQGRWYLLDYKSNHLGMSPADYSRPALEQAMAEHRYDLQYQLYSLALHRLLTLR
LPGYDFEQHFGGVFYLFLRGMPQGGIFHTRPSRELVLGLDRLFGEGAAPALAGVSDNGVE
A
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggccaacccgctcaataccctgcgttttcccctctatggcgagcgactgatcgaggcc
tctgccggcaccggcaagacctacaccatcgccggtctctacctgcgcctgctgctgggc
catggcccgctcattgaagagggggaagacgccggtcaacccagcgcccacgagcgcccg
ctctcggtgaccgagatcctggtggtgacctttaccgaggcggctaccgccgagctgcgc
gggcggatccgcgcccgcatccacgaggcacggctcgcctttatgcgcggtgaaagcaag
gacgccctgctgagccagctgctggtggaggtggaggatcacgaactggcggcccgccgc
ctgctggccgccgaacggcagatggacgaggcggcggtcttcaccatccacggcttctgc
cagcggatgctgaaacagaacgccttcgagtcgggcgccctctttgaaaccgaatttctc
accgacgacagccagctcaggctgcaggcggtgagcgactactggcgatccgagttctat
ccggtggacaagcccctcgccagcgccgtgcgtgcgctctggccgagccccgccgccctg
ttgcgggagatgggcagctggctcgacaacagcgagctggagatgcgcccgcctgcgggg
gacgagaccctcgccgcccgccatcaggcagccatggcccgcattgaggcggtgaagcgc
gaatggctggcgcaaggggacgagatccgccgccagacggatgggcaagtaagccgctac
accggcaagaactacgaaggctggcttgccaagatagccgactgggcgcaggacgaggcc
agcggctacgccatccccaaggagctggagcgcttcggccagacggtgctggaggagaac
ctcaagaaggggggcgcggtgccgaccctgccgctgttcagccagattgatgcgttgctg
gcgagccgtcccggcattcgcgatttgatcctgcaacgggcggcggtggtggtacgcagc
cggatgcaggccagcaagcgccaggctcatcagctctcgttcgatgacctgctcaaagac
ctcgacggcgcgctttgctccggtcttggcgagcggctatgcgagcgcattcgcgccacc
taccgggtggcgatgatcgatgaatttcaggataccgacccccagcagtaccgcatcttc
caccggctttacggcggccacaccgacacggcgctgctgatgatcggtgaccccaagcag
gccatctacggctttcgcggcgccgacatctttacctacattcaggcgcggcgaaatgtg
agcgcccactacaccctcgggcgcaactggcgctccagccgcgcgctggtggcggcggtc
aacggcctgttcgagcgggccaaggatccctttatctacgaggcggatatccccttcctg
ccggtggaggcgcagggcaagagcaaggcgctgcagctggatggcgaagtcgcccccgtg
ctccactgctggcagctgagcggccaacccaccttcaacaagggggattaccagagccgg
atggcccgcgccacggcggtggagatccaccgcctgctgactctggcccgcgcgggcaag
gcgcagatcggcgaccagccggtgaaagcgggggatatcgccgtgctggtgcgcaccggc
gccgagggcaagctggtgcagcaggagctggcgcgcctcgccatcgcctccgtctatctg
tcgaaccgcgagagcgtgctggagcagacggaggcgcgggagatcctgttgattttgcac
gcctgtcagaacccgagcgaggagcgcagcctgcgggcggcgctggcgaccggcctgttt
gatctcgacgccaaggcgctcgatgggctggccagcgacgagcgggcgtgggagagcgcg
gtgcaggagtttctggagtaccgcaagatctggcaccgccgtggcgtgctggccatgctg
cgggccctgctgcaccggcgcaatctcgcctcttcgcttttggcgagcccctatggcgag
cggcggctgaccaacttcctccatcttggcgagctgctgcaacaggtgagcagcgagctg
gatggggagtatgccctgctgcgctggctgggggaggcggtgagtcgccccaacgggcag
gatgcggagcaggtactgcgcctcgaatccgagcgcaagctggtgcagatagtcaccatc
cacaaatccaaggggctggagtacccactggtgttcctgccctttatctgcagccacaga
accgccgagaccccgctctatcacgagtcggatgagacgggcaatcacaccattctcgat
ctgaccggcgccgagggctccctggcggaggccgaccgcgagcgccttgccgaagatttg
cggctgctctatgtggcgctgacccggggcgtctacgccacctggctggggctggcgccg
gtgcgggcgggtgcgggcaagtcggagaagaccgacctgcaccacaccgccatcggctac
ctgctgcaaaagggtgaagagggggatgcgcagacgctggcgaccgccttgaccgagctg
gcacaggcgctgcccggggtggccgtcggtgagccctcgctcacccgtccggccccgctg
ccgccagaggaggagcagttgggcgagccgcaggtgcgccactttagcggcacccttgag
cgggactggtggatcagctcctactccgggctggcggcgcaggggcacggtcacagcaag
ggcgtactcgccaatcccggcttcgatgacgaggtagtgaccgaggcggctgcattggct
tccgagcaagcggaggaggcgccccagccctccatcttcaccttcccgaaaggggcgcgc
cccggcaccttgctgcacagcctgttcgagaccatcgactttcaaagagccgagggcgag
ccgctggcagagcatatcgccaccctgctggcgcaagatggcttcgacgagagctgggcc
caagtgctgcaacagcaggtggaggcggtgctcgataccccgctggaaaccggctttggc
gagccggtacggctgcgggatctggcccccgagcgcaaacaggtggagctggagttcttt
ctgcccatggggcgggtgacggcgccggcgctgaccgcgatctgccagcagcatgacccg
ctgtcgcggggcaacaaaccgctcagctttgccaccgtgcaggggatgctcaagggtttt
atcgacctggtgttcgagtggcaggggcgctggtatctgctcgactacaaatccaaccac
ctcggcatgagcccggccgattacagccgtccggcgctggagcaggcgatggccgagcac
cgctacgacctgcaataccagctctactcgctggcgctgcaccggctgctcaccttgcgc
ctgccgggttacgacttcgagcagcactttggcggcgtcttctatctgtttctgcgcggc
atgccgcaggggggcattttccatacccgccccagccgtgaactggtgctggggctggat
cggttgtttggcgagggggcggcgcccgccctcgccggggtatcggataacggggtagaa
gcatga
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