Pseudalgibacter alginicilyticus: APS56_00160
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Entry
APS56_00160 CDS
T04100
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ahz
Pseudalgibacter alginicilyticus
Pathway
ahz03030
DNA replication
ahz03430
Mismatch repair
ahz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APS56_00160
03430 Mismatch repair
APS56_00160
03440 Homologous recombination
APS56_00160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahz03032
]
APS56_00160
03400 DNA repair and recombination proteins [BR:
ahz03400
]
APS56_00160
Enzymes [BR:
ahz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APS56_00160
DNA replication proteins [BR:
ahz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APS56_00160
DNA repair and recombination proteins [BR:
ahz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APS56_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
UPF0113
Isocitrate_DH_C_bact
Motif
Other DBs
NCBI-ProteinID:
ALJ03654
UniProt:
A0A0N7HXX3
LinkDB
All DBs
Position
54920..55924
Genome browser
AA seq
334 aa
AA seq
DB search
MDEVKQLVTDIKNRKLKPIYFLMGEEAYYIDKISDYIEASVLTEEERGFNQIVLYGRDVT
MEDIIGTSKRYPMMSEYQVVIVKEAQDLSKTIEKLSDYANTPQPTTILVFNYKYKKIDKR
KNLYKALKKNGVVFESKKLYENQVADWIRRVLSSKKYTITPKAAQMLVEFLGTDLSKINK
ELEKLQIILSKGSQITPEIIEENIGISKDFNNFELRKAVGSKNVVKAHQIAHYFAENPKD
NPMVVTVSLLFSFFSQLLRLHGMKDKSPRNIASTIKVNPYFVDEYITAARNYPMRKVSEV
IAILHEFDVKSKGVNSNAVSEGQLLKEMLVRIMG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttggacgaagtaaagcaattagtaaccgacattaaaaacagaaaattgaaacctatttat
tttttaatgggggaagaggcttattatattgataaaatttctgattacattgaggcttct
gtacttactgaagaagaaagagggtttaatcaaattgttttgtatggtagagatgtgaca
atggaagatattattggcacttccaaacgttacccaatgatgtcagaatatcaggtagtt
attgttaaggaagctcaagacttatctaaaaccattgaaaaacttagtgattatgcaaat
acaccacagcctacaacaattttagtgtttaattataaatataaaaagattgataagagg
aaaaacctctataaagcattaaaaaaaaatggggtggtttttgaaagtaaaaagctttat
gaaaatcaagtagccgattggatacgtagggtgttgtcttctaaaaaatataccataact
ccaaaagcagctcaaatgttagttgagtttttggggacagacttaagtaaaattaataaa
gaattagaaaagcttcaaattattttgtccaaaggcagtcaaataactcctgaaataata
gaagagaatattggtattagcaaagactttaataattttgaattacgcaaggctgtgggt
tcaaaaaatgtggtaaaggcacaccagattgcacattattttgcagaaaacccaaaggat
aatcctatggtggtaacagtgtctttattatttagttttttttcgcagttattacgttta
catggtatgaaagataaatcgccaagaaatatagcctctactataaaggttaacccatat
tttgtagacgaatatattacagctgctcggaattatccaatgcgaaaagtaagcgaagtt
atagctattttacatgagtttgatgtaaaaagtaaaggggttaattctaatgctgtttct
gaaggtcaattgttaaaagaaatgttagtaagaatcatggggtaa
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