Pseudalgibacter alginicilyticus: APS56_01555
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Entry
APS56_01555 CDS
T04100
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ahz
Pseudalgibacter alginicilyticus
Pathway
ahz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APS56_01555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahz03400
]
APS56_01555
DNA repair and recombination proteins [BR:
ahz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APS56_01555
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
APS56_01555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
nSTAND3
NMDAR2_C
MeaB
Viral_helicase1
AAA_21
AAA_23
AAA_25
cobW
PRK
CA109-like
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
ALJ03914
UniProt:
A0A0P0D8A1
LinkDB
All DBs
Position
complement(392647..395478)
Genome browser
AA seq
943 aa
AA seq
DB search
MSQFEDFIEVKGARVHNLKNIDVSIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEIYDFLRLLFARAS
DAYSYNTGDKMVSYSDDQIKKLIVSDFKGKRINILAPVVRSRKGHYRELFEQIAKQGFVK
VRTDGEIQDLKKGMKLDRYKTHDIEIVIDRLVIDDSAENDKRLTETINTAMYHGEDVIMV
LDQDTNHTRYFSRSLMCPTSGISYPNPEPNNFSFNSPKGACNNCNGIGTLYQVNENKIIP
DDTLSIKNGALAPHGPEKNSWIFKQFETIAHRYNFKLTDAYKNIPDAAKQMILYGGNEKF
SIESKTLGVTRDYKIDFEGVANFIENQYKTAESTSLKRWAKDYMDKVTCPVCKGSRLKKE
SLYFKINGKNIAELANSDIVELVNWFSDLNNHLSEKQLKIAEEVIKEIKSRLQFLLDVGL
NYLSLNRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNEKLINSLISLR
DIGNSVIVVEHDKDMIERADYVIDIGPKAGKYGGEIISIGTPKELKTHNTLTANYLNGNK
EIEIPKKRREGNGKFLELKGCTGNNLKNVSVKFPLGKMIGVTGVSGSGKSTLINETLYPI
LNAYYFNGVKKPMPYKSIKGMEHIDKVIDINQSPIGRTPRSNPATYTGTFSEIRALFAKI
PEAMIRGYKAGRFSFNVKGGRCETCQGGGLRVIEMNFLPDVYVECETCQGKRFNRETLEI
RYKGKSISDVLDMTINEAVDFFEHIPKIHKKLKTIKDVGLGYITLGQQSTTLSGGEAQRI
KLATELSKRDTGNTFYILDEPTTGLHFEDIRVLMIVLNKLANKGNTILIIEHNLDVIKTV
DHIIDIGYEGGKGGGKVIVEGTPEEVAKHKKSYTAKFLKKELK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatttgaagattttattgaagttaaaggagcacgtgttcataatttaaaaaat
atagatgtatccattcctcgtgaaaaattagtagttattactggtttatcgggtagtgga
aaatcttctcttgcttttgatactatttatgctgaaggacagcgtcggtatatagaaaca
ttttcagcctatgccagacagtttttaggaggtttagaacgtccagatgttgacaaaatt
gatggcctctcccctgttattgctattgaacaaaaaacaaccagcaaatcaccacgttct
accgtgggtaccattacggaaatttatgattttttgcgtttgttattcgccagagcaagt
gatgcttatagttacaatacaggcgataaaatggtaagctatagtgatgatcaaattaaa
aaacttattgttagcgattttaaaggaaaacgcatcaatattttagctcctgttgtacgt
tccagaaaagggcattatcgcgaattatttgagcaaattgccaaacagggctttgtgaaa
gtacgaacagatggcgagattcaagaccttaaaaaaggtatgaaactcgacagatacaaa
acccacgatatagaaattgttattgacagattagtaattgatgattctgccgaaaatgac
aaacgtttaaccgaaactattaatactgctatgtatcatggtgaagatgtaataatggtt
ttagatcaagacacaaaccacacacgatattttagtagaagtttaatgtgtccaacctcg
ggaatttcttatccaaatccagaaccaaataatttttcttttaattccccaaaaggagct
tgcaacaactgcaacggcattggaacactttaccaagtgaatgaaaataaaatcattcct
gacgatacgctttctattaaaaatggcgcattagcacctcatggaccagagaaaaacagt
tggattttcaagcaatttgaaaccattgctcatcgctacaattttaaattaacggatgcc
tacaaaaatattcctgatgctgccaaacaaatgattttatatggaggtaacgaaaaattt
tctattgaaagtaaaaccttaggagtaactcgcgattataaaatagattttgaaggtgtt
gccaattttattgaaaaccaatataaaacagcggaatctacctctttaaaacgatgggca
aaagattatatggataaagttacttgccctgtttgcaaaggttcacgattgaaaaaagaa
tcactttattttaaaataaatggtaaaaacattgcagaacttgctaattcagatattgta
gaacttgttaattggtttagtgacctgaataatcatttatcggaaaaacaattaaaaatt
gccgaagaagtcatcaaagaaattaaatcaaggttgcaatttcttttagatgttggctta
aattatttatccttaaaccggagttcaaaatcactttcgggaggtgaagcgcagcgtatt
cgtttagcaacacaaattggctctcaattagttggtgttttgtatatcttagacgaacca
agcattggtttacatcaacgtgataatgaaaaattaataaattccttaatctctcttcgg
gatattggtaattctgttatagttgtagaacacgataaggacatgattgaacgcgctgat
tacgtgattgatattggtccaaaagctggaaaatatggcggcgaaataattagtattggc
acacccaaggaattaaaaacacacaatacgcttactgccaattatttaaatggaaataaa
gagattgaaatccccaaaaaacgccgagagggtaatggtaagtttttagaattaaaaggg
tgtacaggaaacaatctaaaaaatgtatcagtaaaatttcctttaggaaaaatgattggt
gttacaggtgtttctggtagtggaaaatctaccctaattaacgaaaccttatatcctatt
ttaaatgcttattattttaatggcgtaaaaaaaccaatgccttataaaagtattaaaggc
atggaacatatagacaaagtgattgatatcaatcagtccccaattggaagaacaccaaga
agtaatcctgccacatatactggtacttttagtgaaatcagagctttatttgctaaaata
cctgaagctatgattcgtggttataaagctggcagatttagttttaacgtaaaaggtgga
cgttgtgaaacttgccaaggtggaggtttacgtgttattgaaatgaatttccttccggat
gtttacgtagaatgtgaaacttgtcaaggaaaacgttttaatcgtgaaacattagaaatt
cgttacaaaggaaagtctataagcgatgtattagacatgacaataaacgaagctgtagat
ttctttgaacacattccaaaaattcataaaaagcttaaaaccattaaggatgtaggctta
ggatatatcactcttggtcaacaaagtacaactctttctggcggtgaagcgcaacgcata
aaattagccacagagctttcaaaaagagatacaggaaacactttttacattttagatgaa
cccactaccggactgcattttgaagatattagagtattaatgattgtacttaacaaatta
gctaataaaggcaatactatattaattatagaacataacttagatgttattaaaaccgtt
gatcacattattgatattggttatgaaggaggaaaaggcggaggaaaagtaattgtagaa
ggcacccccgaagaagtagccaaacataaaaaaagttatacagcaaaatttcttaaaaaa
gaattgaaataa
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