Pseudalgibacter alginicilyticus: APS56_02320
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Entry
APS56_02320 CDS
T04100
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
ahz
Pseudalgibacter alginicilyticus
Pathway
ahz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
APS56_02320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahz03400
]
APS56_02320
DNA repair and recombination proteins [BR:
ahz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
APS56_02320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
AAA_21
TMP_4
AAA_22
COG3_N
Motif
Other DBs
NCBI-ProteinID:
ALJ04061
UniProt:
A0A0P0CDP3
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Position
581187..583355
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AA seq
722 aa
AA seq
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MIHIHEKTLQDLEFFTVLQQVSEHCITPLGNEKTLKISPYKTKEDLLNALLLTSEYLSSF
YNDNRIPNHGFDAISKELNLLRIENTYLDIHGFKKIVALSLTTNEIVVFIQKFKEYYPTL
NTFASHIEVTKVIIEKVDANIDRFGDIKDNASELLFDLRQSINSIKGKINQSFATALHTY
HNLDYLDDIRESVVENKRVLAVKAMYRRKVKGAIMGGSKTGSIVYIEPETTLQHTRELNN
LEYEEQEEIVRILKEITNYIRPFSGLLKDSQDFLINIDLISAKAKYAKSMNAILPEISED
KSMFLRDAYHPLLYLNNLKKKTTTFPQTIELKQDSRIIVISGPNAGGKSITLKTVGLLQV
MLQSGLLIPVHERSKVCLFDRVLSDIGDNQSIENHLSTYSYRLKQMNYFLKKCNKNTLFL
IDEFGTGSDPELGGALAETFLEEFYHREAFGIITTHYSNLKILANEMPHMLNANMLFDER
TLEPLFKLVIGQAGSSFTFEVAQKNGIPYSLINRAKKKIERSKVRFDATIAKLQKERSKL
EKTGQSLKLNEKKKIEEADKLEEINARIQKKLESYQELYDSNQRLIYLGQKINDLAEKYF
NNKQKKELMGELFKVVQIENSKRKRVSVKEKKLVKAKETKVKQEVEKKVELIRKKKKEAK
KQAVKPPKPKPILKVGDRVRMEDGRAIGSIDKIEKNKAVVNYGIFTTNVSMDQLELVEAI
KK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatacacattcacgaaaaaacattacaagatttagaatttttcacagttttacaacaa
gttagcgagcattgtattacacctttaggaaacgaaaaaactctaaaaatttcgccttat
aaaactaaagaggacttactaaatgccttactattaaccagtgagtacctatcatctttt
tacaatgacaaccgcatacctaatcatgggtttgatgcgataagcaaagaattaaacctt
ttacgtattgagaacacttatttggatattcacggttttaaaaaaattgtagcactttca
ttgacaaccaatgaaatagttgtgtttatccaaaaattcaaagagtattatcccacactt
aacacatttgcttcacatattgaagttactaaggttattattgaaaaagtagatgccaat
attgaccgctttggtgatataaaagacaatgcgtctgagttattatttgatttacggcaa
tctataaatagcatcaaaggaaaaataaatcaaagttttgcaaccgcacttcacacatat
cacaatttagactatttagatgacattcgagaatcagtggtagagaacaaacgtgtttta
gccgttaaagccatgtaccgacgcaaagttaaaggtgctattatgggtggaagtaaaacg
ggcagcattgtttatatagagcctgaaactacgcttcaacacacacgtgaacttaataat
ttagaatatgaagaacaagaagaaattgttagaattcttaaagaaataactaattatatt
cgtccgttttcaggattattaaaagattctcaagattttttaattaacatagatcttatt
tccgcaaaagcgaaatacgccaaatccatgaatgccattcttcctgaaatttcagaagat
aaaagcatgtttttacgagatgcctatcacccactcctctacttaaacaatttaaagaaa
aaaacaacaacctttcctcaaactatagaattaaaacaagatagtcgtataattgttatt
tctggccccaatgctggtggaaagagtattactttaaaaacggttggattattgcaagtc
atgttacaaagtggcttattaattcctgtacacgaacgcagcaaggtttgtttgtttgat
agggttttaagtgatatcggtgacaatcaatctatagaaaatcacctaagcacctatagc
taccgtttaaaacagatgaattatttcttaaaaaaatgcaataaaaacacactgtttttg
attgatgaatttggcacaggaagtgaccctgaattaggtggtgcattggcagagactttc
ttagaagaattttatcatcgagaagcttttggaatcataaccacccattattccaactta
aaaatcttagccaatgaaatgccacacatgcttaatgccaatatgctttttgatgaacgt
actttagagcccctttttaaacttgtaattggtcaagctggtagcagttttacttttgaa
gttgcacaaaaaaatggcataccttatagtttaataaaccgtgctaaaaagaaaattgaa
cgcagtaaagtacgttttgatgctacaatagcaaaacttcaaaaagaacgttctaaactt
gaaaaaacaggacaatcattaaagcttaacgaaaagaaaaagattgaagaagctgataaa
ctcgaagaaattaatgcacggattcagaagaaattagaaagttatcaagaattatatgat
agtaatcaacgcctcatatatttaggtcaaaaaataaatgatctagctgaaaaatatttt
aacaataagcaaaaaaaagaattgatgggtgaactcttcaaggttgttcaaattgaaaat
tcaaaacgcaaaagagtttcagtaaaagaaaaaaagttagtaaaagctaaagaaactaaa
gtaaagcaagaagtagaaaagaaagttgagcttattcgaaaaaagaaaaaagaagccaaa
aaacaagctgttaaacccccaaaaccaaaacccattttaaaagttggagatagggttaga
atggaagatggtagagctataggaagcattgataaaattgaaaagaacaaagccgtggta
aactatggtatttttacgactaatgtcagtatggatcaattggaattggtagaggctata
aagaaatag
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