Pseudalgibacter alginicilyticus: APS56_03875
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Entry
APS56_03875 CDS
T04100
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ahz
Pseudalgibacter alginicilyticus
Pathway
ahz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
APS56_03875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahz03400
]
APS56_03875
Enzymes [BR:
ahz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APS56_03875
DNA repair and recombination proteins [BR:
ahz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APS56_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
TrmB
nSTAND3
AAA_30
AAA_11
nSTAND_NTPase5
IstB_IS21
T3SS_CopN_3rd
Motif
Other DBs
NCBI-ProteinID:
ALJ04331
UniProt:
A0A0P0CIZ3
LinkDB
All DBs
Position
complement(934319..936772)
Genome browser
AA seq
817 aa
AA seq
DB search
MPNFTDIILPIPLPKLFTYSITVLESKFLKKGMRVAVPFGKSKVYTGIVFSIHEDAPTAY
EAKEIQQILDEQPVVNEKQLALWQWVASYYMCTLGDVMRAALPSAFILESETVISKNIVK
AIDESILKDDEFLVYEALNHQSSLKIHDISNILDKKNVLPVIKRLIEKEAISVEEEIYEK
YKPKLVRYVKLHSHFSTEKALHGLLDELSRAPKQREVVLTLFSISAKTKKPVKVSDLSNE
SGASSAVIKSLIDKDVLEEYHIQTDRVQYSGEETEDSKQLNNYQKTALVEIKESFKKQNI
TLLHGVTSSGKTEVYVKLIEDAINQGKQVLYLLPEIALTTQLVVRLQNYFGEKVAVFHSK
YSSHERVEVWSHVLNNSERGQIVLGARSSVLLPFNNLGLVIVDEEHEQSFKQFDPAPRYH
ARDTAVVLANMYQAKTLLGSATPSLESYFNAKQNKYGFVEITQRYNNVLMPEIELVDIKD
KHKRKLMKGHFSDRLIEEMTETLKLGHQIILFQNRRGFSPIVECNTCGHSPQCPNCDVSL
TYHKYRNQLRCHYCGYATAMQISCLACGSQDLDSKGFGTEQIENEVKSLFPNYNVARMDL
DTTRGKYGYEKIITALEQQEIDILVGTQMLTKGLDFRNIKLVGIMNADNMLNFPDFRAHE
RSFQLMLQVSGRAGRTDERGKVLIQTYNPYHNILQQVSTNNYVAMYNEQMNDRYNYKYPP
IYKQIKITLKHKDFNRVETASIWLAKSLRQVFGDFVLGPESPPVARIRNQFHKNILIKIP
KKQSLLKTKEAIIKINNSFQSIKDFRSVKIILNVDNF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcctaattttacagatataatactccctattccgttacctaagttgtttacttatagt
attacggtattagaatcaaagtttttaaaaaaaggtatgcgtgtcgcggttccttttggt
aaatctaaagtgtatacgggtattgtttttagtattcatgaagatgcacctacagcttac
gaggctaaagaaattcagcaaattttagacgagcaaccagttgtaaatgaaaagcaatta
gcgttatggcaatgggtggctagttactatatgtgtactttaggggatgtcatgcgtgct
gctttgccaagtgcttttattttggaaagtgaaactgttatttcaaaaaatattgttaaa
gctattgatgaatctatcttaaaagatgatgaatttttggtttatgaagcgctaaatcac
caatcttctttgaaaattcatgatatttcaaatatcttagataaaaagaatgtactacct
gtaattaaacggcttatagaaaaagaagctatttctgttgaagaagaaatctacgaaaaa
tataagccaaagttagttaggtatgtaaaattacattctcatttttctacagaaaaagca
ttacatggtttgttggatgaattgagtagagctccaaagcaacgtgaagtagttttaaca
ctgttttcaatttctgccaaaacaaaaaaaccagttaaggtttcagacttatcgaatgaa
agcggtgcttcatctgctgttataaaatcattaattgataaagatgttttagaagaatat
catattcaaacagaccgagtgcaatattctggtgaagaaacagaagattcaaagcaacta
aataattatcaaaaaacagcattggttgaaataaaagaatcttttaaaaaacaaaatata
accctgcttcatggagttacttcttctggaaaaacagaggtgtatgtaaaacttattgaa
gatgctatcaatcagggtaaacaggttttgtatttattgccagaaatagctttaacaact
caattggttgttaggcttcaaaattattttggagaaaaagttgcggtgttccattcaaaa
tattcgtcgcatgaacgtgtagaagtttggagtcatgttttaaacaattctgaaaggggg
caaattgttttaggcgcacgttcttctgtattattgccctttaataatttggggttggtt
atagtggatgaagaacacgagcaatcgtttaagcaatttgatccagcgccacgttatcat
gcgcgagatacagcagtagtacttgctaatatgtatcaggcaaaaacacttttgggatct
gctacacccagtttagaaagctattttaatgcgaagcaaaataaatacggttttgttgaa
attacacaacgttataataatgtattaatgcctgaaattgaattggtggacattaaggat
aagcataaacgcaaattaatgaaaggccattttagcgataggttaattgaagaaatgact
gaaacattaaaattaggacaccaaattattttgtttcaaaaccgaagaggtttttctcct
attgtagagtgtaatacatgcgggcattcaccacagtgccccaattgtgatgttagttta
acgtatcataaatacagaaatcaattgcgttgtcattattgtggctatgcaacggctatg
caaattagttgtttagcttgtggaagtcaggatttggacagtaaagggtttggtacagaa
caaattgaaaatgaagtaaagagtttatttccaaattataacgttgctagaatggatttg
gataccacacgaggaaagtatggttatgaaaaaataattactgctttagagcagcaagaa
atagatattttagttggaacacaaatgctaactaaagggttggattttagaaatataaag
ttggtgggcatcatgaatgcggacaacatgcttaattttccagattttagagctcatgaa
cgtagttttcaattgatgctacaagtatcgggtagggcaggacgaacggacgaacggggt
aaagtgctaattcagacttacaatccgtatcataatatattgcaacaagtttctacaaat
aattatgtagcgatgtataatgaacaaatgaacgatcgctacaattataaatatccaccc
atttataaacagataaaaatcactttaaaacataaggattttaatagggtagaaacagct
tccatttggttggcaaaatctttaagacaagtatttggggattttgttttaggcccagaa
tcgcctccagttgcaagaataagaaatcagtttcataaaaatattttaataaaaatacca
aagaagcaatcgttgttaaaaacaaaagaagctattattaaaataaataatagcttccaa
agtataaaagattttcggtcggttaaaataattttaaatgtcgataacttttaa
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