Pseudalgibacter alginicilyticus: APS56_07240
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Entry
APS56_07240 CDS
T04100
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ahz
Pseudalgibacter alginicilyticus
Pathway
ahz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APS56_07240 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahz03019
]
APS56_07240 (groEL)
03110 Chaperones and folding catalysts [BR:
ahz03110
]
APS56_07240 (groEL)
03029 Mitochondrial biogenesis [BR:
ahz03029
]
APS56_07240 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ahz04147
]
APS56_07240 (groEL)
Enzymes [BR:
ahz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
APS56_07240 (groEL)
Messenger RNA biogenesis [BR:
ahz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
APS56_07240 (groEL)
Chaperones and folding catalysts [BR:
ahz03110
]
Heat shock proteins
HSP60 / Chaperonin
APS56_07240 (groEL)
Mitochondrial biogenesis [BR:
ahz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
APS56_07240 (groEL)
Exosome [BR:
ahz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
APS56_07240 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
APS56_07240 (groEL)
Exosomal proteins of breast cancer cells
APS56_07240 (groEL)
Exosomal proteins of colorectal cancer cells
APS56_07240 (groEL)
Exosomal proteins of bladder cancer cells
APS56_07240 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
ALJ04928
UniProt:
A0A0P0D472
LinkDB
All DBs
Position
1741127..1742755
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPQVTKDGVSVAKEIE
LEDAHENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVSAITEDLEKQSKKVGNSSEMIKQVASISANNDDTIGELISKAFNKVGKEGVITVEEA
KGLETYVDVVEGMQFDRGYLSPYFVTDSDKMIADLENPYILLFDKKISNLQEILPILEPV
AQSGRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENADISMLGTAETVTVDKDNTTIVNGSGNADDIKARVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKSVLEKITTENLDEVTGIQIVARAIESPLRTIVENAGGEGSVVVSKVMEGKGAFGYDA
KTETYVDMLKAGIIDPKKVTRIALENAASVSGMILTTECALIDIKEEAAAHPPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacataaaatttgatattgaagcacgcgacgggctaaaacgcggtgttgat
gcattagcaaatgcagtaaaagtaacattaggtccaaaaggaagaaatgtaatcataagc
aaatcatttggagctccacaagttactaaagatggtgtatctgttgcaaaagaaatagag
ttagaagatgctcatgaaaatatgggtgctcaaatggtaaaagaagttgcttctaaaacc
aatgatttagcaggtgatggtacaacaaccgccaccgttttagctcaagctattgttaaa
gaaggtttaaaaaacgtggctgcaggtgctaacccaatggatttaaaacgtggaattgac
aaagctgtaagtgctattactgaagatttagaaaaacaatcaaaaaaagttggaaactct
tcagaaatgatcaagcaggtagcgtctatttcagcaaataatgatgacactattggcgaa
cttatttctaaagcttttaataaagtaggaaaagaaggggttattactgttgaagaagca
aaagggttagaaacatatgttgatgttgtagaaggtatgcagtttgacagaggatattta
tctccttattttgtgaccgactctgataaaatgattgcagatttagaaaatccatacatt
ttgttattcgacaaaaaaatatctaacttacaagaaattcttccaattttagagcctgtt
gctcaatctggtcgtccgttattaattattgctgaagatgtagatggtcaagctttagcc
actttggtagtaaacaaattacgtggtggattaaaaatagctgctgtaaaagctcctggt
tttggtgatagacgtaaagctatgttagaagatattgctattttaactggtggaactgtc
atttctgaagaaagaggatttactttagaaaatgctgatatttctatgttaggtactgct
gaaactgtaacagttgataaagacaatactacaattgttaacggttcaggaaatgctgat
gatataaaagcacgagtaaaccaaattaaagcgcaaattgaaacaaccacatcagactac
gataaagaaaaacttcaagaacgcttagctaaattagctggtggtgttgccgtactttat
gttggtgctgcaagtgaagttgaaatgaaagagaaaaaagaccgcgtagatgatgctctt
cacgctacaagagctgctgttgaagaaggcattgttgctggtggtggtgttgctttagtg
agagctaagtcagttttagaaaaaataacaaccgaaaaccttgatgaagttactggaatt
caaattgtagcacgtgctatagaatctccattacgtactattgtagaaaacgcaggtggt
gaaggtagtgttgttgtttctaaagtaatggaaggcaaaggtgcttttggatacgatgct
aaaactgaaacgtatgtagatatgttaaaagctggaattatcgaccctaagaaagtaaca
cgtatcgctttagaaaatgcagcatcagtttctggtatgattctaactacagaatgtgct
ttaattgatattaaagaagaagctgctgctcatcctccaatgggtggtggtatgcctgga
atgatgtaa
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