Pseudalgibacter alginicilyticus: APS56_15655
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Entry
APS56_15655 CDS
T04100
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ahz
Pseudalgibacter alginicilyticus
Pathway
ahz03420
Nucleotide excision repair
ahz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APS56_15655
03430 Mismatch repair
APS56_15655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahz03400
]
APS56_15655
Enzymes [BR:
ahz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APS56_15655
DNA repair and recombination proteins [BR:
ahz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APS56_15655
MMR (mismatch excision repair)
Other MMR factors
APS56_15655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Viral_helicase1
UvrD-helicase
AAA_19
UvrD_C_2
Tri-helical_Ada2b_C
Motif
Other DBs
NCBI-ProteinID:
ALJ06481
UniProt:
A0A0P0DC12
LinkDB
All DBs
Position
3767229..3768251
Genome browser
AA seq
340 aa
AA seq
DB search
MVDKKLILAVAGSGKTTNLIDKLNLTERFYLVTYTITNASLIRLRIIKKFGYLPNNIKVF
TYFNFLYSFCIKPFLFYKYNLKGVFLENSPEPTNYFKNSNIRKYISKSGYAYHNRLGKLI
EHENLIEDIKLRLEKFCDHFYYDEVQDLGGHDFNFIMELSKSNVNFLFVGDFYQQTYVTS
FDRNVNGTLHKDYDKYLKRYEDFNISIDLETLSNSWRCSPTICNYISENLGILIGSHRTD
PTEIILIEDKEKLSSIIKDNSIIKLVYNNANKRDFRAKNWGECKGEDDYIDTCIIMNATT
FKLYKKDDLNNLANRTKNKLYVAFSRTRGNCYLVDEKLLK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggttgataaaaaattaatcttagctgttgctggctcaggaaaaacgaccaatctaata
gataaactaaatttaacagaaagattttatttagttacttatacaattacaaatgcaagc
ttaattcggttaagaattattaaaaagtttggctatttacccaacaacataaaagtattc
acttatttcaattttctatatagcttctgtataaaaccttttttattctataagtataat
ctcaagggagtttttcttgaaaattcgccagagccaactaattatttcaaaaattcaaat
atcagaaagtacataagtaaaagtggttatgcttatcacaataggttgggaaaattaata
gaacacgaaaatttaatagaagatattaagttaaggttagaaaaattctgtgaccacttt
tattatgatgaagtacaagacttaggaggtcacgattttaattttataatggaactatca
aaatccaatgtcaatttcctatttgtaggagacttctatcaacaaacatatgtgacaagt
tttgacagaaatgtaaatggaactctacacaaagattatgacaaatatttgaaaaggtat
gaagactttaatatttctattgacttagaaaccttgagcaatagttggagatgcagtcct
acaatatgtaattatatttcagaaaacttaggtattctaatcggctcacacagaactgac
ccaactgaaattatattaattgaagacaaagaaaaattatcttcaattataaaagataat
tcaataataaagttggtgtataacaatgctaacaaaagagattttagagcaaaaaactgg
ggagaatgtaaaggagaagatgattatattgatacttgtataattatgaatgctacaact
tttaaattatataaaaaagacgatttaaataatttagcgaatcggacaaaaaacaaatta
tatgttgctttttcaagaacacgagggaattgttatttagttgacgagaaactcttgaaa
taa
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