Anaerobacillus isosaccharinicus: AWH56_004665
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Entry
AWH56_004665 CDS
T06884
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aia
Anaerobacillus isosaccharinicus
Pathway
aia02020
Two-component system
aia02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aia00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AWH56_004665 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AWH56_004665 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aia03021
]
AWH56_004665 (rpoN)
Transcription machinery [BR:
aia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AWH56_004665 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
DUF6734
HTH_IclR
DUF7337
HTH_21
Ku_C
Motif
Other DBs
NCBI-ProteinID:
QOY38488
UniProt:
A0A7S7LCF6
LinkDB
All DBs
Position
complement(4720232..4721602)
Genome browser
AA seq
456 aa
AA seq
DB search
MIDFRGGWVMNMDFGLYQQQSMKLVMTNELRQAISILQYSTHELLSFIEEQQLENPLLEV
KDKKINDVQKSAKSETDYEKVADWKTYEGDYTSPLDYVSKNEASLQDHLFNQIRFMPLND
AEKKIIQYFVDSLDENGYFTGDLEEVASHFSITEEKALYCLHFLQSLDPVGIGARSLQEC
LLLQLRKLDHRNNVAETIVESYLTMFANKKWKEIAKALSISVEEVQSVADLIQTLQPKPG
AIYNNDPLTYISPDAFIELIDGQFFISMNDHLIPNLTVSRHYQDLLKKATDETSQKYVQQ
KHQQILWLLKSINQRQQTLLKVTEAIAKYQEDFFKFGYDYLKPLTLKEIAADIDMHESTV
SRVTTQKYVQTPRGLFELKYFFSSSIKSEGGTNASSLSVKELIKKIVDQENKQKPLSDQK
IVAVLEKDHSIEVSRRTVTKYREELNIPSSAKRKRF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttagaggaggttgggtaatgaatatggattttggtttgtatcaacaacag
tcgatgaagctagttatgacgaacgaattgcgtcaagcaatttccattttgcaatattca
acacatgaattattgtcttttattgaagagcaacaattagaaaatcctcttctcgaagta
aaggataaaaaaataaatgatgttcaaaaatctgctaaatctgagactgattatgaaaag
gtggcagattggaaaacttacgaaggtgattacacgtcaccattagattatgtaagtaaa
aatgaagctagcctccaagatcatttatttaatcaaatccgatttatgccattaaatgat
gccgagaaaaagattattcaatacttcgtagattcgttagatgaaaatggatactttaca
ggggatttagaggaagtggcaagccatttttcgataacagaagaaaaggcattatactgc
ttacactttttgcaatctcttgatccagtaggaattggtgctagatcactccaagagtgc
ctactccttcaattaagaaaacttgatcataggaataatgttgccgaaacgattgtcgaa
agctatttaacgatgttcgcaaacaaaaaatggaaagaaattgcaaaggcactttcgatt
tcagtagaagaggtgcaatctgttgcagatctcatccaaacattgcaacctaagcctgga
gcgatatataataacgatccgctaacatatataagccctgacgctttcattgaattaata
gacggtcaattttttattagtatgaatgatcatctaatccctaacttaacagtcagtcgt
cattatcaagacttacttaaaaaagcaacggatgaaacttcacaaaaatatgtgcagcaa
aaacatcaacaaattttatggctattaaaaagtatcaatcaaaggcaacaaacattgcta
aaggtgaccgaggcaattgctaagtatcaagaagatttctttaaatttggttatgattat
ttaaagccgttaacactaaaagaaattgccgccgatatcgacatgcatgagtcaactgtt
agtcgtgtaacaacacaaaaatacgttcaaactcctagagggctgtttgaactcaagtac
ttctttagctctagcataaaaagcgaaggtgggacaaatgcttcatctctatcggtgaag
gagctcatcaaaaaaatagtcgatcaagaaaataaacaaaaaccactttcagatcaaaaa
atagtcgcggttctagaaaaagatcattccatcgaagtatcaagaagaacagtgacaaaa
taccgtgaagaattaaacatcccatcatccgcgaagaggaaaagattttag
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integrated database retrieval system
