Anaerobacillus isosaccharinicus: AWH56_007965
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Entry
AWH56_007965 CDS
T06884
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aia
Anaerobacillus isosaccharinicus
Pathway
aia03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWH56_007965 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aia03021
]
AWH56_007965 (rpoC)
03400 DNA repair and recombination proteins [BR:
aia03400
]
AWH56_007965 (rpoC)
Enzymes [BR:
aia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWH56_007965 (rpoC)
Transcription machinery [BR:
aia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWH56_007965 (rpoC)
DNA repair and recombination proteins [BR:
aia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWH56_007965 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QOY37522
UniProt:
A0A1S2MFE2
LinkDB
All DBs
Position
171822..175448
Genome browser
AA seq
1208 aa
AA seq
DB search
MIDVNNFEYMKIGLASPNKIRSWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVTDAGDTPLDTKQLLSEKEYRTYREKYGKGFTAQMGAEAIRKLLS
DIDLEKEVDLLKEELVTAQGQRRTRAIKRLEVLEAFRNSGNDPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLQMYQCGLPKE
MALELFKPFVMKELVAQGIAHNIKSAKRKVERVQPEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPILVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKDAIGEGFIFKDTNEAVIAYQNGYVHLHSRVAIP
VASLKKTTFTEEQQSQLLLTSVGKLIFNEILPETFPYINEPSMTNLQEATPDRYIVPMGT
DVKELFKERDVVTPFKKGFLGNIIAEVFKIFKISETSKMLDRMKALGFKYSTKAGITVGV
ADIVVLPEKKEILADSELKVDRVVKQFRRGLITEEERYDRVISIWSAAKDVIQEKLMGTL
DKLNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLEVAAIKDGTEIIEGLY
DRLVGRFIFKTVYHPETKEVIVGRNTLITEDIAKEIEDAGIKEVTIRSAFTCDTRHGVCK
KCYGRNLATGSDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVISEIVGKVIDVSDVTDKREVTVQGEIETRNYPIPYGARIKVTVGQEVIAG
EELTEGSIDPKELLKVTGINGVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVL
DAGETEVLPGSLIEIQHFNDANKKVLLTGGQPATGRPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLIPAGTGMARYRNIDLAFEGKEEDGEVEGQEV
EKEIVLHD
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaacaattttgaatacatgaaaattggtcttgcttcaccgaataaaata
cgatcttggtctcgtggtgaagttaagaaaccagaaacgattaactatcgtacattaaag
ccagaaaaagatggtcttttttgcgaaagaattttcggacctacaaaagactgggaatgt
cattgtggtaagtataagcgtgtacgttataaaggtgttgtttgtgaccgttgtggtgta
gaagtaacgagagctaaggttcgacgtgagcgtatggggcatattgaattagctgcccct
gtctcacacatctggtactttaaaggaattccaagtcgaatggggcttgtccttgatatg
tcaccacgttcattagaagaagtcatttattttgcttcttatgtggtaactgatgctggt
gatacacctcttgatacgaaacagcttctttcagaaaaagaataccgtacgtatcgtgaa
aagtatggaaaaggcttcacagcacaaatgggagcagaagcgattagaaagcttttatca
gatattgacctagaaaaagaggttgatctgttaaaggaagaattagttacagcgcaaggg
cagcgtcgaactagagcaattaaacgcctagaagttttagaagcgtttagaaattcaggg
aatgatccatcgtggatgatccttgatgtgctcccagttattccgcctgagttacgtcca
atggttcaattagatggtggtcgttttgctacatctgatctgaatgatttgtaccgtcga
gtaattaacagaaataatcgtcttaaacgtctattagaccttggggctccaaatatcatc
gttcaaaatgaaaagcgtatgcttcaagaagcagttgatgctttaattgacaatggtcga
cgtggtcgtcctgtaacagggcctggaaacagaccgttaaagtcgttatcgcatatgctt
aaaggtaagcaagggcgtttccgtcagaacctattaggaaaacgtgttgactattcagga
cgttcggtaatcgtagtaggaccacaactgcaaatgtatcaatgtggtttaccgaaagag
atggctcttgagttatttaagccgttcgtaatgaaagaattagtagcacaaggtatcgca
cataacattaagagtgcaaaacgtaaagttgaaagagttcaaccagaggtttgggatgta
ctagaagaagtgattagagagcatccggtattattaaaccgtgcacctacacttcaccgt
ctaggtatccaagctttcgaacctattcttgttgaaggaagagcgattaaacttcaccca
cttgtatgtacagcttataacgctgactttgatggtgaccaaatggccgttcacgttccg
ctttcagcagaggcccaagcagaggcaagaattttaatgttagcagcgcaaaacattcta
aatccgaaagatggtaaaccggttgttacaccgtcacaggatatggtattaggtaactac
tacttaactttagagcgtaaagatgctattggtgaaggttttatctttaaagatacgaat
gaagcagttattgcttaccaaaatggttatgttcacttacacagccgtgtagcaattccc
gtagcttctttaaagaaaacgacatttaccgaagaacaacaaagtcaattattgttaact
tctgttggtaaattaatttttaacgagatcttaccagaaacattcccatacattaatgaa
ccatcgatgacaaatcttcaggaagcaactcctgatagatacattgttcctatgggtaca
gatgttaaagaacttttcaaagagcgtgatgtagtaactccgtttaagaaaggtttctta
ggaaacatcattgcagaagtatttaaaatctttaagatttctgagacgtctaaaatgcta
gatagaatgaaagcattaggatttaaatactctacaaaggcaggaattactgtaggggta
gctgacattgtggtattaccagaaaagaaagagatcttggctgattctgaattaaaagta
gatagagttgtcaaacaattccgtcgtggtttaattacagaagaagagagatatgatcgt
gttatttcgatttggagtgctgccaaagatgttattcaagaaaagctaatgggtacactt
gataaacttaatccaattttcatgatgagtgactctggtgcccgtggtaacgcatcgaac
tttacacagctcgctgggatgcgtggacttatggcgaacccatctggtcgtatcattgag
ttaccaatcaagtcaagtttccgtgaagggttaacagtattagaatactttatctctact
catggtgctcgtaaaggtctagccgatacagctctgaaaacggctgactcaggttactta
actcgtcgtctagtagacgttgctcaagacgttattgttcgtgaagacgattgtggtaca
gatagaggtttagaggttgctgcaattaaagacggaactgaaatcattgaaggattatat
gatcgcttagttggccgttttatatttaagactgtatatcatcctgaaacaaaagaagtt
attgttggcagaaatacgctaataactgaagatattgctaaggaaattgaagatgcaggc
attaaagaggtaacaattcgctcagcatttacttgcgacacaagacatggagtttgtaaa
aagtgttacggtcgtaacttagctacaggttctgatgttgaagttggggaagcggtagga
attattgcggctcaatcaattggtgagccaggaacacagcttacaatgcgtactttccat
acaggtggagtagccggagacgatattactcaaggtttaccacgtattcaagagctattt
gaagcgcgtaacccgaaaggtcaagcggttatttcagaaatcgtcggaaaagttattgat
gtttctgatgtaactgataagcgtgaagtaactgtacaaggtgaaattgaaacaagaaac
tatccaattccttatggagcaagaattaaagtaactgttggccaagaagtaattgctggt
gaagagttaacagaaggttcgattgatccgaaagaattactaaaagttactggtatcaat
ggagtacaagaatacttactacgagaagtgcaaaaagtttaccgtatgcaaggggtagaa
attggtgataagcacgttgaggtaatggtacgtcaaatgctaagaaaagtaagagtatta
gacgctggtgaaacggaagtattaccaggttcacttatcgaaatccaacatttcaatgat
gcaaacaagaaagtattattaactggtggtcaacctgcaacaggtcgtccagttcttcta
ggtattacaaaagcgtcactagaaacagattcattcttatctgcagcatcattccaagaa
acaacacgtgttctaactgatgcagctattaaaggtaagcgtgatgagcttcttgggctt
aaggaaaatgttatcatcggtaagctaattccggctggtacgggaatggcaagatatcgt
aacattgaccttgcttttgaagggaaagaagaagatggagaagtagaagggcaagaagtt
gaaaaagaaattgtccttcacgactaa
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integrated database retrieval system
