Anomalospiza imberbis (cuckoo-finch): 137461790
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Entry
137461790 CDS
T11605
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04120
Ubiquitin mediated proteolysis
aib04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137461790 (UBE4B)
04120 Ubiquitin mediated proteolysis
137461790 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aib04121
]
137461790 (UBE4B)
Enzymes [BR:
aib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137461790 (UBE4B)
Ubiquitin system [BR:
aib04121
]
Ubiquitin ligases (E3)
U-box type E3
137461790 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
137461790
NCBI-ProteinID:
XP_068027633
LinkDB
All DBs
Position
23:7706275..7740939
Genome browser
AA seq
1344 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGSSSQPTTPLTSPQRETPPGAAPAPGPSHSLGLNVHSMTPA
TSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQVDVD
SGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFLNSL
SAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPDRSL
ILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTNFTSYVPMTGSSLTPPASSVATP
AVPPISVSSQLPAASPSWTQPSSARYHPYTVAHSGGSAAAAVPRSLSISIPSSSPSPPAV
AAGPPAMPVVTSRHRPTAMGPPLFTASPGALRRRPSLQSRIPPSLYDNPFSLLLLAVSDV
SEDSSDEENEDDDFSCVQFGSSVGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECFDRV
GIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNL
PFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASKECSLDSDNFKYPLMALCELCEIKFG
KTHPMCSLVVSLPLWLPKSLSPGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAI
TLENTRVVSQSLQHYLELARQELFKILHSILLNGDTREAALGYMAAVVNANMKKAQMQTD
DRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIFHPRCRIELPTDETRVKATMEEVAAW
IAELYRDPSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNE
SQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRI
LDPAYPNIKLPLTPEVPKVFASLPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVV
MLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDV
EHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFL
LDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVDMF
HILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTD
IYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAK
NARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTE
NMLEPVPELKEQIQAWMRDKQNDH
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggacgagatccggcggaggcgcctggcgcggctggcaggaggc
tcctcgtcccagcccaccaccccgctgacgtccccgcagagagagaccccgccgggcgca
gccccagcgccggggccctcgcacagcctgggcctcaatgtgcacagcatgaccccagct
acctctcccatcggggcatcaggagtagcccaccgaagccagagcagcgaaggagtgagt
tccctcagcagttctccatcaaacagccttgaaacccaatctcagtccctctctcggtct
cagagcatggacattgatagtgtctcctgtgagaaaagtatgtcccaggtagatgtggat
tcaggaattgagaacatggaggttgatgagaacgaccgcagagagaaacggagtctgacg
gacaaggaacctctgtcggggtcagaagtgtcggaggaacaagctctacagctggtctgt
aagatcttcagggtctcttggaaggaccgagacagagacgttattttcctgaattcactc
tctgcccagttcaagcagaacccaaaggaagtgttttcagattttaaggacttaatcggg
cagattttgatggaagtgctgatgatgtccacccaggcaagggatgagaacccctttgcc
agcctgacagccacctcccaacccattgctgcagctgcccgctctcctgacagaagcctg
atcttaaatatgggctccaaccctggaagcagccccatgttctgtaatgtgggctccttt
ggttccagctcgttgtccagtctctatgggactagtccagctcctcctaccaatttcaca
agctatgtaccaatgactggttcatctcttaccccaccagccagttcagttgccacccca
gcagtgcctcccatttctgtcagctctcagctgccagcagccagcccctcgtggacgcag
ccttcctctgcgcggtaccacccctacaccgtggcccattccggaggctctgcagccgct
gccgtgccgcgctccttgagcatttccatcccatctagttctccaagtcctccagccgtg
gctgctggccctccagccatgccagtcgtcacatccagacacaggcccacagccatgggt
ccgcctttgtttactgcctcaccgggtgccttgcgcaggcgtccttccttacagagcagg
attcctcctagtttatacgacaaccctttctccctcctccttcttgctgtttctgatgtg
tctgaggacagtagtgatgaagaaaatgaagacgatgatttttcttgtgtccagtttggg
tccagtgtgggaggctctggcagctcgagtgtttctgattcctgcagtgaccacttcacc
attgaaaattgtaaggagacagagatgctgaactacctcattgagtgttttgacagggtt
ggaatagaggagagaaaagcaccaaagatgtgtagccagccaacagttagccagttactg
agcaacatcagatcccagtgcatttcacacgctgctttggtgctccagggatccttgaca
caaccacggtcattgcagcagcagtctctgctggtaccatatatgctgtgtaggaatctc
ccatttggcttcattcaagagttggtgagaacaacttaccaggatgaagaggtgttcaaa
cagatctttattcccatcttgcaaggcctggctgtggcttccaaagagtgctccctcgat
agtgacaattttaaatatccccttatggccctatgcgaactctgtgaaatcaagtttggg
aaaacgcaccccatgtgcagtttggttgtctctttgcccttgtggttgcctaaatcttta
agcccaggtgcaggaagagaactgcaaagactttcctaccttggagccttcttcagtttg
tctgtctttgctgaagatgataacaaagttgttgaaaagtacttctcaggtcctgccatt
actcttgagaacacccgggttgttagccagtccttgcaacattacctggaattggcaagg
caagagctgttcaagatcctgcacagtatcctgctgaacggggacacccgggaggcggct
ctcggctacatggcagctgtggtcaatgccaacatgaaaaaggcccaaatgcagacagac
gatcgtttggtgtccacagatggcttcatgctcaacttcctctgggtactgcagcaactg
agtacgaagataaagctggaaacggttgatcccatgtacatattccaccccaggtgtcga
atcgagcttcccacagatgagacaagagtgaaagcaacaatggaggaggttgcagcctgg
attgctgaactttacagggatccgtctccattttctgagccgaaattcccaacggaatgt
ttcttcctcaccctgcacgcccaccacctgtccatcctgcccagctgccgtcggtacatc
cgcaggctgcgcgccatcagggagctcaacaggactgttgaagatttgaaaaacaacgaa
agtcagtggaaggattctcctctggccaccaggcatcgagagatgctgaaacggtgcaag
acacagctcaagaaactggtgaggtgtaaggcttgtgcagatgctggtttgctggatgag
aacttcctcaggagatgcctgaatttctatggcatggtgattcagctgatgcttcgcatt
cttgaccctgcctatcccaacataaaattgcctttaactcctgaggttccgaaagtattt
gcatcattgccagagttttatgtggaagatgttgctgaatttttattttttattgtacaa
tatgctcctcaggtgctgtatgagccctgtactcaggacatcgtgatgttccttgttgtg
atgctgtgcaaccagaactacatccgaaatccttatttagtagccaagctggtggaagtg
atgttcatgacaaatccagctgttcagccccggacacagaagttctttgaaatgattgag
aatcaccctctctccactaaattgttagtcccctccctgatgaagttttacacagatgtg
gaacatactggagccactagcgagttctacgacaagtttacaatccgctaccacatcagc
accattttcaaaagcctctggcagaatatcgctcaccatggtacatttatggaagagttc
aactctgggaagcagtttgttcgctacatcaacatgctgataaatgacacaactttcttg
ctggatgagagtctggagtccctaaaacgtatccatgaagtgcaagaggagatgaagaat
aaagagcaatgggacctgctgcccagggatcagcagcaggcccggcagtcgcagctggct
caggatgagcgcgtgtcccgttcgtatcttgccctggcaacagaaactgttgatatgttc
catatccttaccaagcaggtccaaaagccttttctcagacctgaacttggaccacgactg
gctgctatgttgaactttaacttacagcaactgtgtggccccaagtgccgcgacctgaaa
gttgaaaacccagagaaatacgggtttgaaccaaagaagctgttggaccaactgactgac
atttatctgcagctggattgtgctcgcttcgctaaagcaattgctgatgatcagaggtcc
tacagtaaagagctctttgaggaggttatctccaagatgaggaaggctggaatcaagtct
accatagcaatagagaaattcaaactgctggcagagaaagtggaggaaattgttgccaag
aatgcccgtgcagagattgattacagcgatgctccagatgaattcagagacccgctgatg
gacactctgatgaccgaccccgtgaggctgccctccggaaccatcatggacaggtcgatc
atcctgaggcacctgctgaactcctccactgatcctttcaaccggcagacgctgacggaa
aacatgctggaaccagtgccagaacttaaagagcaaatccaagcctggatgagagacaag
cagaatgaccattaa
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