Anomalospiza imberbis (cuckoo-finch): 137462081
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Entry
137462081 CDS
T11605
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04140
Autophagy - animal
aib04142
Lysosome biogenesis
aib04148
Efferocytosis
aib05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
137462081 (VPS11)
04140 Autophagy - animal
137462081 (VPS11)
04148 Efferocytosis
137462081 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137462081 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aib04131
]
137462081 (VPS11)
Membrane trafficking [BR:
aib04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137462081 (VPS11)
Hops complex
137462081 (VPS11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
zf-C3H2C3
TPR_GEMI5
zf-RING_5
zf-RING_UBOX
Beta-prop_IFT122_1st
zf-RING_11
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
137462081
NCBI-ProteinID:
XP_068028199
LinkDB
All DBs
Position
24:7480248..7490074
Genome browser
AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDRETVREPSGPDGAGAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFL
PRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVL
NIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKV
LRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKLPFEQAESNMKRYGKIL
MHHVPNETTELLKILCTDYRPSGGNEGPGMLEGKKANSEEFIPIFANNSRELKAFLEHMT
EVQADSPQGVYDTLLELRLQNWAHEQDEQTKEKLHNEALTLLKSGRFKTVFDKALVLCQM
HNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGNQEACLWEQALSYFARKEE
NCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSHQIEQDEQR
IQKYREETTRIRLEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPSGKTATTIEAGLQRELLIHAKRST
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctacctgcagtggcgccggttcgtgttctttgacagagagacggtgagggag
ccgtcggggccggatggagccggtgcgaagcctttcgcactgcccccgggcatcgcagtc
tgcgactcgggccggggaagcctcgtgttcggagatatggaaggtcagatttggtttttg
cctcgctcccttcaactcagcagtttccaagcttacaagctaagggtgacgcatctgtac
cagctgaagcagcacagtatcctggtttccattggtgaggatgaagagggtataaatcct
ttggtgaaagtctggaacctggagaaacgagatggtggcaatcctctttgcacacgaatt
tttccagcaataccaggtaacaagcccacggttgtatcctgcctgactgtccacgagaat
cttaatttcatggctatcggttttgcagatgggagtgttgtacttactaaaggagacatc
actcgagatcggcacagtaagacccagatcctacatgaaggtagttaccccgttactggc
cttgcttttcgacagtctggcaaaacaacacatctatttgtggtgacaacagagaacatc
cagtcttatatgctttcagtgaaagactatcctcacctggagctggacactcacggttgt
ggattgcgctgttcatctctcagtgacccctcccaggatctgcagttcattgtggcagga
aatgaatgtgtgtacctttaccaaccagacgaacgcggcccctgctttgctttcgaggga
caaaagctgattgttcactggtatcgggggtacctcatcattgtctccaaggaccgaaag
acttccccaaagtcagaatttgctgggaatgaggcacaaaattcagacaaacaagtcctg
aatatctatgacttatgcaacaaattcattgcatacagctcaatctttgatgatatagtg
gatgtcttggcagagtggggatctctctatgtactgaccagagatgggaagatccatgta
ctgcaggagaaggatacacaaaccaaactcgagatgctgttcagaaagaacttatttgaa
atggccattaacctggccaagagccaccacttggacagtgatggtttgtcagagattttc
cggcagtatggcgatcatctctataacaagggaaaccacgatggagccatccagcagtat
atccgaactatagggaagctagaaccgtcttatgttattcggaaattcctggatgctcag
cgtatccacaaccttactgcttatctacagatgctccatctgcagtccctggccaatgca
gaccacactacacttctgctgaattgctataccaaactcaaagacagctccaaactggag
gagttcattaagacgagtgagagtgaggtccactttgatgtggaaacagctatcaaggtg
cttcgccaagctggttactactcccatgccgtgtacctggcagagaagcatgagcatcat
gaatggtacctcaaaatccagttagaggacatcaagaactaccaagaggctttgcactac
attggaaaactgccctttgaacaggcggagagcaacatgaagcgatatggtaaaatcttg
atgcaccatgtccctaatgagaccactgaattgctgaagatcctttgcactgattaccgt
ccctcgggaggtaatgaaggccctgggatgctagaaggaaaaaaggctaattcagaggag
ttcatcccaatctttgcaaacaattcccgagaactgaaagcttttctggagcacatgact
gaggtgcaggctgactctccacagggtgtctatgacactttactggaacttcgactgcag
aactgggcacatgaacaagatgagcagaccaaggagaagttgcacaacgaagccctcacc
ctcctgaagagcggaaggttcaagacagtctttgataaggccttggtcttatgtcagatg
cacaatttcaaggatggtgttctctacctctatgagcagggcaaacttttccagcagatc
atgcactaccatatgcagaatgagcagtacaagaaggtgattgaggtgtgcgagttgtat
ggcaaccaagaggcttgtctctgggaacaggctcttagctactttgcacggaaggaggag
aactgcaaggagtatattgctgcggtgctgaaacacatcgagaacaagaatcttatgcct
ccgctgcttgttgtgcagactctggctcataactccacagccaccctgtctgtgattaag
gattatcttgtcaacaagctgcagaagcagagccaccagatagagcaggatgagcagaga
attcagaaataccgagaagaaactacaaggatccgcctggaaattgaagagctaaaagca
agtcccaagatttttcagaagaccaagtgtagcatttgcaccagtgcattggagctgcct
tcagtccacttcctgtgcggtcattcctttcaccagcactgctttgaaagctactctgag
agtgattcagaatgtcctacttgcatgccagaaaaccgcaaagtgatggacatgatccga
gcccaggagcagaagagagatctgcatgatcagtttcagcatcagctcaagtgttcaaat
gatggcttctcagtcgttgctgactactttggtcgcggagtcttcaataagctcaccctg
atcacggacttgccctcgggaaagaccgctacaacgatcgaggctggtctgcagcgggag
ctgctcatccacgccaagcgcagtacctga
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