Anomalospiza imberbis (cuckoo-finch): 137462226
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Entry
137462226 CDS
T11605
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
aib
Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04514
Cell adhesion molecule (CAM) interaction
aib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
137462226 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137462226 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aib00535
]
137462226 (SDC3)
Proteoglycans [BR:
aib00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
137462226 (SDC3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
137462226
NCBI-ProteinID:
XP_068028478
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Position
25:complement(1101633..1148917)
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AA seq
550 aa
AA seq
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MAPPSDPTAIPVHPTYPSPLHLPQIPPPHLSLVAPQSAQAPPPSPPVPCRPLPLSPGRGR
AGPGRGGGGGAGGGAAGPGGRRGGGGGPAPSARTHRPPPAGGGNKGPSPPPPPPPAAAGS
VLAAGRCPGRCPPPAPRGLRSLPLLLLLLLSARAALAQRWRNENYERPVDLEGSGDDDPF
GEDELDDIYSGSGSGYFEPELGLDTAVSLTTDTLVTLPTTAAVLPITAAQPVATPLEPSP
TPQDTTPGQATSAFLIPRTTEAPVVPSWKATTTSTTASEPPTTTATTTTTTTTATATTTT
TTTEATTTISSTTVATAKPTTIQRFLPPLATKAATTRATTLETPTTPVPETSTPTEVATS
RLVPTRTAKPRALPKPSTSRTAELPEKSTALPPMATTLPPTEAPQMEPGEVTTAPDKEPE
VPASSGPSGDFEIREEEETTRPDLGNEVMAVVTPPAAPGPGRNVETGLMDNTIDSGNSAA
QLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQANVTYQ
KPDKQEEFYA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggccccgccctctgatcccactgccatcccggtgcaccccacctaccccagccccttg
cacctgccccagatcccccctccccatctgtccctggtcgccccccagtctgcccaggct
cctcccccgtccccccccgtcccctgccgccccctcccgctgtccccgggccgtggccgt
gcggggccggggcggggcggcggcggcggcgcgggggggggcgcggcggggccgggaggg
cggcgcggcggcggcggcggccccgcacccagcgcccgcacccaccgcccgcctcccgcg
ggcggcggcaacaaaggcccttccccgcccccgccgccgcctcccgccgccgccggcagc
gtccttgcggcaggaagatgcccggggaggtgcccgccgccggcgccccgggggctgcgg
agcctcccgctgctgctgctgctgctgctcagcgcccgcgccgcgctggctcagcgctgg
cgcaatgagaactatgagcggcccgtggacctggagggctccggggatgacgaccccttt
ggagaagatgagctggatgacatctactccggctctggctcggggtattttgagccggag
ctggggctggacacggccgtgagcctgaccacggacacgctggtgacgctgcccaccacg
gcggccgtgctgcccatcaccgctgcccagcctgtggcaacacccctggagccatctccc
accccccaggacaccacccctgggcaggccaccagcgccttcctcatccccaggaccaca
gaagcaccggtggtgcccagctggaaagccaccaccaccagcaccacggccagtgagccc
ccaaccaccacggccaccaccaccaccaccaccaccacagccaccgccaccaccaccacc
accaccacagaggccaccacaaccataagcagcaccaccgtggccacagccaagcccacc
accatccagaggttcctgccccccttggccaccaaggcggccaccacccgggccactacc
ctggagacccccaccacacctgtccccgaaaccagcacgccgacagaggtggccacgtca
cgccttgtccccacacgcacggccaagcccagggccctgccaaagcccagcacctcgagg
actgcagagctccccgagaaaagcacggccttgccacccatggccaccacgctgccgccc
acagaggccccccagatggagccaggggaggtgacaacagcccctgacaaggagccagag
gtcccggccagcagtggccccagcggggacttcgagatccgggaggaggaggagacgact
cgtcccgacctcgggaacgaggtgatggctgtagtgacaccaccggcggcgccggggccc
ggcaggaacgtggagacggggctgatggacaacacgatagactcgggcaactcggctgct
cagctgccccagaaaaacatcctggagaggaaagaggtgttgatagcggtcatcgtgggt
ggtgtggtgggcgcccttttcgccgccttcctggtgatgctgctcatctaccgcatgaag
aagaaggacgagggcagctacaccctggaggagcccaagcaggccaacgtcacctaccag
aagcccgacaagcaggaggagttctatgcgtag
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