Anomalospiza imberbis (cuckoo-finch): 137462569
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Entry
137462569 CDS
T11605
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04514
Cell adhesion molecule (CAM) interaction
aib04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
137462569 (NFASC)
04517 IgSF CAM signaling
137462569 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aib04515
]
137462569 (NFASC)
Cell adhesion molecules [BR:
aib04515
]
Immunoglobulin superfamily
L1 family
137462569 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
C2-set_2
Ig_5
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
137462569
NCBI-ProteinID:
XP_068029143
LinkDB
All DBs
Position
26:3077448..3150655
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AA seq
1385 aa
AA seq
DB search
MIPRRAQVTCAGIVFALCLQHLVSAIEVPLDSNIQSELPQPPTITKQSIKDYIVDPRDNI
FIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPDDYEGEYQCF
ARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPEPVIFWMSSS
MEPIPQDKRVSQGHNGDLYFSNVLAQDALTDYSCNARFHFTHTIQQKNPYTLKVKTKKSH
NETSLGNSPAMYRARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGELPVGKTKMENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PENLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILGPRNQLIRVIQNNRTRLDCPFFGSPIPTL
RWFKNGQGNTLDGGNYKAHENGSLEMFMARKEDQGIYTCVATNILGKAEAQVRLEVKDPT
RIVRGPEDQVVKRGTMPRLHCRVKHDPTLRLMVTWLKDDAPLYLGSRMKKEEDGLTIYGV
TEKDQGDYTCVASTELDKDLAKAYLTVLAIPANRLRDLPKERPDRPRDLELTDLAERSVR
LTWIPGDDNNSPITDYIVQFEEDRLQPGMWHNHSRYPGSVNSAVLSLSPYVNYQFRVIAV
NDVGSSVPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV
RWRRRDPRGSWYNETVRSARHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDYP
KAAPTDVRIRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVS
FPGDRNRGTVSRLFPYSNYKLEMVVTNGRGDGPRSEMKEFPTPEGVPSSPRYLRIRQPNL
EIINLEWDHPEHPNGIITGYTLRYQPFNGSRTGRTVVENLSPNQTRFTLQRSDPISRYRF
MLRARTQVGEGETLVEESPALLDEATPSPGTVPGEATGPPPTAVEETSPETSPESSPETS
PTISPTISPTISPTISPTISPTTTPTTTDTTTTTTTTTTTTTTTSTAASTAASTSAAAER
APAATTRHELAANGSSIWDIRAMANSNWANITWSHNFSAGTDFVVKYITSNKTEKSIPVK
AQGPSSVQLADLTPGMMYKLWVFPIWSHPSEHSYITFTTSSAYTKNQVDIATQGWFIGLM
CAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQ
TSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNA
IYSLA
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaggagagcccaggtcacctgtgctggaattgtctttgccctctgcctccag
caccttgtcagcgccatcgaggtccccctggactcaaatatccagagtgaattgccgcag
ccccccacgatcaccaagcaatccatcaaggattacatagtggatcccagggataacatc
ttcatcgaatgcgaagccaaaggcaaccccgttcccaccttttcctggacacggaacggg
aagttcttcaacgtggccaaggatcccaaggtgtccatgaggaggagatcggggactttg
gtcatcgacttccacagcgggggccggcctgacgactacgagggcgagtaccagtgcttc
gccaggaacgactatgggacggctctttccagcaaaatccacctccaggtttccaagtct
ccgctgtggcctaaggaaaaggtggatgtgatcgaggtggatgagggggccccgctgagc
ctgcagtgcaatcccccgcccggcctccctgagcctgtcatcttctggatgagcagctcc
atggagccaatccctcaggacaagcgcgtgtcccagggccacaacggggacctttacttc
tccaacgtgctggcgcaggacgcgctgaccgactacagctgcaacgcccgcttccacttc
acccacaccatccagcagaagaacccctacaccctcaaggtcaaaaccaagaagtcccat
aacgaaacgtctttaggaaattcccccgccatgtaccgcgcccgagggatcacggaaacc
actcccagcttcatgtatccctacggaacttccagcagccagatggtgctccgaggggtg
gatctcctgctggaatgcattgcctctggagtaccagcgccggacatcatgtggtacaag
aaaggcggagagctcccggtgggcaaaaccaagatggagaatttcaacaaggccctgcgc
atctccaacgtgtctgaggaggactccggggaatatttctgcctggcctccaacaagatg
ggcagcatccgccacacgatctcggtgagagtgaaggctgctccctactggctggatgag
ccagagaacctgatactggcccccggcgaggacggcaggcttgtgtgccgggccaacggc
aaccccaaaccgtccatccagtggctggtgaacggagagcccatcgaagcgtctcccccc
aacccgagccgggaggtggccggggacaccatcgtattccgggacacgcagatcggcagc
agcgccgtgtaccagtgcaacgcatccaacgagcacggctacctgctggccaacgccttc
gtcagcgtgctggatgttcccccccggatcctgggcccccggaaccagctgatcagggtg
atccagaacaacaggacgcgcctggattgtccctttttcgggtcccccatccccaccctg
cgctggtttaagaatggccaggggaacacgctggatggaggcaactacaaagcccatgag
aacgggagcttggagatgttcatggctcggaaggaggaccagggaatctacacctgtgtg
gccaccaacatcttgggaaaagctgaggcccaggtccgcctggaggtcaaagaccccacc
aggatcgtgaggggccctgaggaccaggtggtcaagaggggcaccatgccccggctccac
tgccgcgtcaagcatgaccccacactgcggctcatggtcacgtggctcaaggacgatgcc
cccctgtacctggggagcaggatgaagaaggaagaggatggtctgacgatctatggcgtg
actgagaaggaccagggcgattacacgtgcgtggccagcacggagctggacaaggacttg
gctaaggcctatctcaccgtgctggccatccccgctaatcggttgagagatttacccaaa
gaacgacctgaccggccccgggacttggagctgacggatctggctgagaggagtgtgcgg
ctgacgtggatccctggcgatgacaacaacagccccatcacagactacattgtccagttt
gaggaggaccgcttacagccgggaatgtggcacaaccactccaggtatcccgggagcgtc
aactcggccgtgctgagcctgtccccatacgtgaattaccaattccgggtgatcgccgtc
aacgacgtgggcagcagcgtgcccagcttgccctccgagcgctaccagaccaacggggca
cgtcctgaaataaatccaacgggagttcaaggggcagggacccaaaaaaacaacatggag
ataacatggacccctctgaacgcaactcaggcttatgggcccaacctcaggtacatcgtg
aggtggcggcggcgggacccccgcgggagctggtacaatgagaccgtgcggagcgcgcgg
cacgtggtgtggaacacccccatctacgtcccctacgagatcaaggtgcaggccgagaac
gacttcggcagagccccggagcccgacacctacatcggatattccggggaggattatccc
aaggctgcgcccacggatgtcaggatcagagtcttaaacagcactgccatagctctgacc
tggacccgggtgcacctggacaccatccagggacagctcaaggagtaccgagcctatttc
tggagagacagcagcttgctgaagaacctgtgggtctccaaaaaacggcagtttgtgagt
tttcctggagaccgcaaccggggcaccgtgtcccggctgttcccttacagcaactacaag
ctggagatggtggtcaccaacggccgaggggacgggccccgcagcgaaatgaaggaattc
cccacccctgaaggagtgcccagctcccccaggtacctgcggatccgacagcccaacctg
gaaatcatcaacctggagtgggatcaccccgagcatcccaacgggatcatcacgggatac
accctccgataccaaccctttaacgggtcccggacgggccggacagtggtggagaacctg
tcccccaaccagacaaggttcaccctgcagaggtcagacccgatctcccgctatcgcttc
atgctccgtgcccgcacccaggtgggagagggagagaccctggtggaggagtcgccggca
ctgctggacgaagctacgccaagcccaggtaccgtacccggagaggcaactgggccgcct
ccaaccgcagtggaggaaaccagtcctgaaaccagtcctgaatccagtcctgaaaccagt
cctacaatcagtcctacaatcagtcctacaatcagtcctacaatcagtcctacaatcagt
cctacaaccaccccaaccaccaccgacaccacaaccacaaccaccaccaccacaaccacc
acaaccaccaccagcaccgccgccagcaccgccgccagcaccagcgccgctgccgagagg
gctccggcagccaccaccaggcacgagttggctgccaatggatcgtccatatgggacatc
agagccatggcaaacagtaactgggcaaacatcacctggagccacaatttctcggcagga
actgactttgtggttaagtatatcaccagtaacaagacagagaaatcaatccccgttaag
gctcagggcccgtcctcggtgcagctggcagatctgacgccggggatgatgtacaagctg
tgggtgttccccatatggtcccaccccagtgagcactcgtacattacctttaccaccagc
tcagcctacaccaagaaccaggtggacatcgccacgcagggctggttcatcggcctcatg
tgcgccatcgccctcctggtgctcatcctcctcatcgtctgcttcatcaagaggagccgt
ggcgggaagtatccagtgcgggacaacaaggacgagcacctcaatcccgaggacaagaac
gtggaggacggatccttcgactacagcgatgaagacaacaaacctcttcccaacagccag
acctcgctggacgggacgataaagcagcaggagagcgacgacagcttggtggactacgga
gaagggggcgagggccagttcaacgaggatggctccttcatcggccagtacacggtcaag
aaggacaaagaggagaccgagggcaacgagagctctgaggccacgtcccctgtcaatgcc
atttattccttggcatag
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