KEGG   Anomalospiza imberbis (cuckoo-finch): 137462638
Entry
137462638         CDS       T11605                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
aib  Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137462638 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aib03041]
    137462638 (BCAS2)
   03400 DNA repair and recombination proteins [BR:aib03400]
    137462638 (BCAS2)
Spliceosome [BR:aib03041]
 Complex B
  Other components
   Prp19 complex
    137462638 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    137462638 (BCAS2)
DNA repair and recombination proteins [BR:aib03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    137462638 (BCAS2)
SSDB
Motif
Pfam: BCAS2 THOC7 ZapB_rel CCDC113_CCDC96_CC INO80F YhjD SCRG1 Tup_N NOCA1_mid GAS DUF3450 Phlebovirus_NSM OmpH
Other DBs
NCBI-GeneID: 137462638
NCBI-ProteinID: XP_068029304
LinkDB
Position
26:complement(4144434..4149580)
AA seq 226 aa
MSGPGLVAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAHDYSA
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLRE
MESTWVSLVSKNYEIERTIVQLENEISQIKQQHGEANKENIQQDFQ
NT seq 681 nt   +upstreamnt  +downstreamnt
atgtcgggcccggggctggtggccggggatgttgtggtggatgcgctgccctacttcgac
cagggctacgaggcgccgggcgtgcgggaggcggccgcggcgctggtggaggaggagacg
cggcggtaccggccgaccaagaactacctgagctacctgcccgcgcacgactacagcgcc
ttcgagaccgagatcatgcggaacgagttcgagcgcctggcggcccggcagcccctggag
ctgctcagcatgaagaggtacgagctgcctgccccctcctccgggcagaagaacgacatc
acggcgtggcaggagtgtgtgaacaactccatggcacagctggagcaccaggccgtgcgc
atcgagaacctggagctcatgtcccagcacggctgcaacgcctggaaggtgtacaacgag
cacctggttcatatgatagagcaagcccagaaagagcttcagaaattgaggaaaaacatt
caggacctgaactggcagaggaagaacatgcagctcacagctggggctaagctgagagag
atggaatccacgtgggtctctcttgtcagtaaaaattacgagattgaacgaactattgtg
cagctggaaaatgaaatttcacaaatcaagcagcagcacggggaagcaaacaaggagaat
atccagcaagacttccagtga

DBGET integrated database retrieval system