Anomalospiza imberbis (cuckoo-finch): 137463008
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Entry
137463008 CDS
T11605
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03018
RNA degradation
aib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137463008 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
137463008 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aib03019
]
137463008 (LSM4)
03041 Spliceosome [BR:
aib03041
]
137463008 (LSM4)
Messenger RNA biogenesis [BR:
aib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137463008 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
137463008 (LSM4)
Spliceosome [BR:
aib03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
137463008 (LSM4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
137463008
NCBI-ProteinID:
XP_068029996
LinkDB
All DBs
Position
27:complement(4654280..4661203)
Genome browser
AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGVGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctgtccttgctgaagacggcgcagaaccaccccatgctggtggagctgaag
aacggggagacgtacaacgggcacctggtgagctgcgacaactggatgaacatcaacctt
cgggaggttatctgcacatcacgggacggggacaagttctggaggatgccagagtgctac
atccgtggcagcaccatcaaatacctgcggatccccgacgaaatcattgacatggtgaag
gaggaggtggtgtccaagggcagaggccgtggtgggatgcagcagcagaagcagcagaag
ggccgtggggttggaggagctggacgaggtgtgtttggtggccgtggccgaggaattcca
ggcagtggaagaggccagcaggaaaaaaagccaggcaggcaatcagccaagcagtga
DBGET
integrated database retrieval system
