KEGG   Anomalospiza imberbis (cuckoo-finch): 137463009
Entry
137463009         CDS       T11605                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
aib  Anomalospiza imberbis (cuckoo-finch)
Brite
KEGG Orthology (KO) [BR:aib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aib03036]
    137463009 (KDM4B)
Enzymes [BR:aib01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     137463009 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     137463009 (KDM4B)
Chromosome and associated proteins [BR:aib03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    137463009 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 Tudor_3
Other DBs
NCBI-GeneID: 137463009
NCBI-ProteinID: XP_068029997
LinkDB
Position
27:complement(3897063..3972501)
AA seq 1141 aa
MGARAVPRAANGRGGEAGAGGGRGALRSPGRPPLRCAPRAAEGPARRTGTMGSENPSPQN
PGCKIMTFRPSLEEFRDFGRFIAFMESQGAHRAGLAKVIPPKEWKPRRTYDDIDDMVIPA
PIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLERKYWKNLTFVS
PIYGADISGSLYDADVDEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFGMWKTTFAWHT
EDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLRHKMTLISPSI
LKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMATQCTCR
KDMVKISMDVFVRVLQPERYDLWKQGKDIAVLDHMKPTALSSPELDAWNETKAELKAKLL
RRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEELKRGPDLEEE
ERSKGMEGEAGECKAKARPPKAKGERKKKQLFPPQPPVPPPGPIPAPQPPPEAGPGGAAR
PPGPPSAPGTEQGRPAAPLNVVQPSEAPAEEDDFKPRPIIPMLYVVPRSKKVVFDKEHMS
CQQAFEQFATQKGLGWREQGPGKEQDGAEAERAELAAEAASAFSKMKMEIKKSRRHPLGK
PPTRSPLSVVKQETSSDEEMFPFSGEEDMSDPEALKSLLSFQWKNKALNFPAERKFNAAA
ALSEPYCAVCTLFYPYNQSSQVEKEAAPISTGEPSSFVHLSKCGQKTKPLIPEMCFTSSG
ENTEPLPSNSYIGEDGTSPLISCAKCCLQVHASCYGIRPELVNESWSCSRCSAGAWAAEC
CLCNLRGGALQMTTDGRWVHVICAIAVPEARFLNVIERHPVDISAIPEQRWKLRCVYCRK
RMKKVSGACVQCSYEHCSTSFHVTCAHAAGVPMEPDDWPYVVSITCFKHKANQNVPFRRE
VALGQTVITKNRNGLYYRCRVIGTSTQTFYEVNFDDGSYSDNVYPESIISRDCIRMGPPP
EGELVQLQWTDGIIYKAKFIAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRL
SLSTGAPQEDVFSGDEVRAAKRPRLGNPRNPEEYGQTPDYLAFMESLLQTQYQPGTQSNM
F
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgggcgcgagggcggtgccgcgcgcggccaatgggcgcggcggggaggcgggcgcaggt
ggtggccgcggggcgctgcgctcgcctgggcgccccccccttcgctgcgccccccgcgcc
gccgagggccccgcgcgcaggactggaactatggggtcggaaaacccgagcccgcagaac
cctggctgcaagatcatgaccttccggccctcgctggaggagttccgcgacttcgggagg
ttcatcgccttcatggagtcccagggagcccaccgggcagggctggctaaggtgatcccc
cccaaggagtggaagccccggcggacgtacgatgacatcgatgacatggtgatcccagcc
cccatccagcaggtggtcacgggccagtcagggctcttcacccagtacaacatccagaag
aagcccatgaccgtgggcgagtaccggcgcctggccaacagcgagaagtactgcacccct
cgccaccaggattttgaggacctggagcgcaagtactggaagaatctcacctttgtgtct
cccatttatggggctgatatcagtggctccctgtatgatgcagacgtggatgagtggaac
attggcaatctgaacaccctcctggacatggtggaacacgagtgtggcatcatcatcgag
ggtgtgaacactccctacctctactttgggatgtggaagacaacttttgcttggcataca
gaggacatggatctctacagcatcaactacttgcattttggggagcccaaatcctggtat
gccattcccccggaacacggcaagaggctggaacgcctggcaaaaggatttttcccagga
agctctcagggatgtgatgctttcctccgtcacaagatgaccctcatttctccctccatc
ctgaagaaatacgggattccctttgacaggatcacccaggaagctggggagtttatgatc
acatttccttatggttaccacgctggcttcaaccacggcttcaactgcgccgagtccacc
aacttcgccaccctgcgctggatcgactatggcaaaatggcaacacagtgcacgtgccgc
aaggacatggtgaagatctccatggacgtgtttgtcagggtgctgcagcccgagcgctac
gacctctggaagcagggcaaggacatcgctgtcctggaccacatgaagcccacggccctg
agcagccccgagctcgacgcctggaacgagaccaaggcagagctgaaggcaaaactgctc
cgcaggataggagatgaggaagaggacaacaaacaccggtctcacagaaaaaggagtcaa
cccagaagacacaaaacagaggatcagaagtctcttggggatgtcatggctattgaaact
gccttggaagatgtgaaagtaaaagaggagctgaaaagggggccggatctggaggaagag
gagagaagcaaagggatggagggagaagcaggggagtgcaaggccaaggcgcggcccccg
aaggccaagggcgagcggaagaagaagcagctgttcccccctcagccccccgtgccgccg
ccggggcccatcccggccccccagccgcctcccgaggccggcccggggggggcagcacgg
cccccggggcccccctcagccccgggcacggagcagggccggcccgcggctcccctgaac
gtggtgcagccctcggaggcgccggccgaggaggacgacttcaagccgcggcccatcatc
cccatgctgtacgtggtgccccgcagcaagaaggtggtgttcgacaaggagcacatgtcc
tgccagcaggccttcgagcagttcgccacgcagaaggggctgggctggcgcgagcagggc
cccggcaaggagcaggacggcgccgaggcggagcgcgccgagctcgcggcggaggctgct
tctgccttctccaagatgaagatggagatcaagaagagccgccggcacccgctgggcaag
cccccgacacgctccccgctgtccgtggtcaaacaggagacctcgagtgatgaagaaatg
tttccattttctggagaggaagatatgagtgatccagaggctttgaaatctttactttcc
ttccagtggaagaacaaagcacttaatttcccagctgaaaggaagttcaatgcagctgct
gccctgagtgagccatactgtgctgtctgcaccctcttctacccctataaccagtcctca
caggtggagaaggaagctgcccccatctccacaggggagccgtcctcgttcgtgcacctt
tccaagtgtgggcagaagaccaagcccctgatcccagagatgtgctttacctcaagtgga
gaaaacaccgagccccttccttcaaattcctacattggagaggatggaaccagtcccttg
atatcctgtgccaaatgctgcctgcaggttcatgctagctgttacgggatacgcccggag
ctggtgaacgagagctggtcgtgctcgcggtgctcggccggcgcctgggcagcggaatgt
tgcctgtgcaatctcaggggaggagctctccagatgaccactgatggccggtgggtccac
gtaatctgtgctattgctgtccccgaggcgcgtttcctcaatgtcatagagcgtcatcct
gtggatatcagcgccatccccgagcagaggtggaaactgaggtgtgtgtactgcaggaag
aggatgaagaaggtgtcaggggcctgtgtccagtgctcctacgagcactgctccacgtcc
ttccacgtgacgtgcgcgcacgcggccggcgtgcccatggagcctgacgactggccctac
gtcgtgtccatcacctgcttcaagcacaaagcaaaccagaacgtcccgttccggagggag
gtggccctggggcagacagtgatcaccaagaacaggaacgggctctactatcgctgcagg
gtcatcggcaccagcacccagaccttctacgaagtgaacttcgacgatggctcctacagt
gacaacgtttaccccgagagcatcattagcagggactgcatccggatggggccccctccg
gagggggagctggtgcagctgcagtggacggatgggatcatctacaaggccaagttcatt
gcagcccagatcagtcagatttaccaggtggagtttgaagatggctctcagctaatggta
aagcgtggggatatttataccttggaggaagagcttcccaagagagtcaagtctcgcctg
tccctcagcactggggcccctcaggaagatgtattttcaggagatgaagtgagagcagcc
aagcgtccccggctggggaatccaagaaatcctgaagaatatggacagaccccagattac
ctggcctttatggagagcctgttgcagacacagtaccagcctgggactcagagcaacatg
ttttaa

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