Anomalospiza imberbis (cuckoo-finch): 137463140
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Entry
137463140 CDS
T11605
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137463140 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aib03009
]
137463140 (REXO1)
Ribosome biogenesis [BR:
aib03009
]
Eukaryotic type
Pre-60S particles
RNases
137463140 (REXO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
137463140
NCBI-ProteinID:
XP_068030257
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All DBs
Position
27:complement(1358287..1402666)
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AA seq
1179 aa
AA seq
DB search
MNKYLQCLSTPGSSERGYDPYNPELPRPSLEVEDGFLADITDVTPGILELELVNKAIEAV
KNEVEREQKKYEELLETTKEFVASEGSSLISNTPVSAAGPQNDSFASLEYNPGSYNFSNN
SDYNPTPLAAAGRSSKYTLDSSRSKGSPLEYVPKAVVQNKKYSSTVTNNKYVIDDSKPST
DLEYDPLSNYSARLLGKATTKGSKRERASDYEDSYSPSRKKLCEDPDDDEVLARFSSSED
EAEVEYKTASASSPSKAGSESESNEFSSKEQSTKVDGSASQESKEAAQHREDLPNSQKNL
AKNSSDKSSKAAKLCSGKNNQEIENRNKDSKDKTKKKKTDISKAPGLSEAGKKEKNKNGD
KVLKKEEKLKTKNEEKNCKDKSVKVKTDGNLKKPEKQKSEKVDGCKKEKSKSTTSSSGKS
KSEGVTKGTEKVGSSRKDSQNRTADVKNGKESSGRKNKEKGTKPSLERKKDKASCAGQGD
PKKGRKQQSLSHVDLFGDESGDEDDKGRPLSSSLLDVSSDLDGADSESASDSDKDRRKKV
KRSKLSKSSSSSSTSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQPS
KEEANEEKTEDNLTTLFPGQKRRISHLVKQGNAEAPSKPVVRPYRPPTAQEVCYQRIQLA
QQQAAQLVGTVQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKAAVGGRSVTPSNDSE
APTLPLKPCTLAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYL
NLFIDECLKFCSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLAPNSPVST
NKTSNKKVVSHEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLMTEEQLKEN
GYPMPHPEKAGRAVLFTAEEKKVIDSSCRICCRCGTEYMVSASGSCIRKEECVHHWGRLR
KQRVPGGWETHYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYA
LDCEMCYTKQGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITL
RDVQAVLLNMFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMA
DYLKRIIQDNVEGHDSSEDARACMELMVWKIREDAKVKR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatacctgcagtgtttatcgaccccgggcagctcagagcgaggctatgatccc
tacaaccccgagctgcccaggccctcgctggaggtggaggatggctttctggctgacatt
acagatgtcacacccggaattctggagctggagctggtcaacaaggccattgaggcagtg
aagaacgaagtggagagggagcagaagaagtacgaggagctgctggaaaccacaaaggag
tttgttgcttcagagggctcctcactcatttcaaacacacccgtgtcagctgctggacct
cagaatgattcctttgcctccttggaatataatccagggagctacaacttcagtaataac
tcagactacaaccccactcctctggctgctgctggccggtccagtaaatacactttggat
tcctcccgctccaaagggagcccattggaatatgtccccaaggctgtggtacaaaataaa
aaatacagcagcactgtcactaacaacaaatacgtgattgatgactccaagccttccacg
gacttggaatatgaccccctttccaattactctgccaggctgttgggcaaagccacaacc
aaggggtccaaaagggaaagggcctctgattatgaggactcctactctccatcacggaag
aagctctgtgaagatcccgatgatgacgaggtgttggccaggttctcctcctctgaagat
gaggctgaggtagaatataaaacagcttctgctagttcaccctcaaaagctggttctgag
agtgagtcaaacgagttctccagcaaagagcagagcacaaaagtggatggctctgcttcc
caggagagcaaagaagcagcacagcacagggaggaccttccaaattcacagaaaaacctt
gccaagaactcatcagacaagagctcaaaggcagcgaagttgtgttctggtaagaacaac
caggaaattgaaaatagaaacaaagactccaaagacaaaacaaaaaagaagaaaactgat
attagtaaagcaccaggcctcagtgaggctgggaagaaggagaaaaataaaaatggagac
aaagtgctcaagaaagaagaaaaattaaaaaccaagaatgaagagaaaaactgcaaagac
aaaagtgtcaaagtgaaaacagatgggaacttgaagaaacctgaaaaacagaagtccgaa
aaagtggatgggtgtaagaaagaaaagtccaagtccaccaccagcagttcaggaaagagc
aagagcgagggtgtcaccaagggcacagagaaggtggggagcagcaggaaggattcgcag
aacagaacagctgatgtgaaaaatggcaaggaaagctctggtcgtaaaaacaaggaaaaa
gggaccaagccctccctggagcgaaagaaagacaaggccagttgtgcaggacaaggagac
cccaaaaagggtcggaagcagcagagtttgagccacgtggacctgtttggagatgagagt
ggagatgaggatgacaaaggccggcctttgtcctcctcgttacttgatgtgagctcagac
ttggatggggctgactctgaatcagcctctgacagtgacaaggacaggagaaagaaagtg
aaacgctcaaagttgtccaagtcctcatcatcttcctcaacatctgacgacattgattat
tccatccttgagaaagatgtggacttcgagtcagatcccatggaggagtgtctcaggatc
tttaatgaatctaaagatgtgaaaactgaagacaagggaaggctgggcaaacagccatcc
aaagaggaagcaaatgaagaaaagacagaagataatttaactaccttgtttcctggccaa
aaaagaaggatctctcatcttgtcaaacaaggaaatgcagaggccccgagcaagccggtg
gtgcggccgtaccgtccccccacggcccaggaggtgtgttaccagaggatccagctggct
cagcagcaggcagcgcagctggttgggactgttcaaaagacctctctctgtttgccagga
gaaaagaggaggattgctcacgtgccaaatgcagccctcaccgcagcagccaagcaaagc
ctcgggagcagtaaggcagctgttggtggcaggagtgtcacaccttccaatgactctgaa
gcccccacccttcctttgaagccttgcaccttggctgggatggcttccaagaccaccagc
accatcgtgcccaaaagggtagcacatgttccctccttacagagcaccactttacagagg
cctgttattcccacagaatttggtgctaaagtcccaaccaacattcgccagaggtatctc
aatctcttcattgatgagtgcctgaaattctgctcctcctcccaggaagccttcgacaag
gccctggcagaggagaaggtggcctacgagcgcagcaccagtcgcaacatctacctgaac
gtggccgtgaacaccctgaagaagctccgcagcctcgcgcccaactccccagtcagcacc
aacaagacaagtaacaagaaggtggtgtcccacgaggctgtgctgggagggaagcttgct
gccaagaccagctttactctgaaccgctcagggagcctgagagccgaggatctgacagga
gctgccctgtaccggcgcctcaaggagtacctgatgactgaggagcagctcaaggagaac
gggtacccaatgcctcaccctgagaaggctggacgtgctgtgctcttcactgcagaggag
aagaaagtgattgactcctcgtgcaggatctgctgtcgctgtggcaccgagtacatggtc
tcagcctcggggagctgcatccgcaaggaggagtgcgtccatcactgggggcggctgcgc
aagcagagagtgccaggtgggtgggaaacccactacagctgctgctctggagctgtgggg
tcaccaggctgccaggttgctaaacaacacgtgcacgatgggcgcaaggagagcctcgat
ggctttgtgaagacttttgagaagctgcccacgactgatggctaccctgggatctacgcc
ttagactgtgaaatgtgctacactaagcaaggactggagctgacaagagtaactgtgatc
aactcggagctgaaagtggtgtacgacacctttgtcaagccagactccaaggtggtggat
tacaacaccagattctcaggtgtgacagaagaggacctggagaacacgagcatcaccctg
cgggatgtccaagccgtcctactgaacatgttcagtgcagacaccatactgatagggcac
agcttggaaagcgacttatttgcactaaagctgatccacggcaccgtggtggacacagcc
atcgtgttcccccaccgcctggggctgccctacaagcgggccctgcgcacgctgatggcc
gactacctcaaacgcatcatccaggacaacgtggaaggacacgactccagtgaggatgcc
agagcctgcatggagctgatggtgtggaagatcagagaggatgccaaggtgaagcgatga
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