Anomalospiza imberbis (cuckoo-finch): 137463504
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Entry
137463504 CDS
T11605
Symbol
RFX5
Name
(RefSeq) DNA-binding protein RFX5
Organism
aib Anomalospiza imberbis (cuckoo-finch)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
WHD_Cdc6
Motif
Other DBs
NCBI-GeneID:
137463504
NCBI-ProteinID:
XP_068030841
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All DBs
Position
29:79686..92490
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AA seq
2085 aa
AA seq
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MADEGLGTRATRKGTLSPGGARGGATESSTLLQELRGNISKSVQSKVDSILQDVQKFSDS
DKLYLYLQLPSGPSLGEKSSGSSLELSALGTAEHMHACSWIRNHLEEHTDTCLPKQDVYD
AYKRYCDNLGCRPLSTANFGKIIREIFPNIKARRLGGRGQSKYCYGGIRRKTVVSLPPLP
SLDLKVTETAELAELAQSYSSEVTEAACALTCDWAEKILRRSFNNIVEVAQFLLQQHIIS
PRSAHADLLMAMVVQENTDKPPQDPRPPAAPKKNGLDPSDSGQEQAKKDGVPKGHVQPRP
EKKKPPEPPRPASSPQVNALVARLPLLLPRMPPSERPPGPGAAPVRPAPPVLVPRLTAAP
LGGTVKVALPLPVGTALAPGGAGAAGLLSPPAAIPVLNVLLPGVGVPAAETPGGSARAAG
DGEGQRGKATKRALEGAGDGAAHKRRRGRPRKRPEDAAMSPEDVEVPKGEEGGDSPPGGS
PGAGSATVPAGDRGVAGAAAESGGDSMEVDSDTGADGDSPVRGSASVPLGDSSVSGSASV
PLGDSSVSGSASIPLGDSSVSGSASISLGDSSVSGSASISLGDSLVNGSATTPLEDSPAE
GSATIPLRDSLVSGSIPGDGSAGGGSATVPPSDTSVSGSASVPLGDSPVSGSASVPPSDS
SVSGSATVPISDSSVSGSATVPISDSSVSGSASVSLGDSSVSGSDTVPVSDSSVSGSASV
SLGDSSVSGSATVPVSDSSVSGSASVPLGDSSVSGSATVPVSDSSVSGSASVPLGDSSVS
GSATVPVSDSSVSGSASVPLGDSLVSGCASFPSGGSPGGGSATVSVRDSSPMVSDTEDGL
DTGSATTEDRPVAASATREDGPVTASATVPVTDSSSSDSGTTEDRPDTGCATVPVTDSSS
SDSATMEDRPVAASATTGDRLVTGCATTEDRPVNGSATVPVTDRPDPGNDTSPVRDSSPM
VSDTGDRPVTGSATVPVRDSSSSASGTAGDRPVTRSATIPTRDSATLPVRDKPVPGSASV
CSKDSPSRASVPGDRSVARSATVPTAGGSATIPVKDSPSRISATTPDRPIRGSATIRDSL
AGGSATVPIRDSTAGGSATIPVKDSASQASGTAGDRPVTRSATNPVRDSPAGGSATTPVK
DSLARGSATTGDSPSRGSATIPVKNSSPRATATTGDRPVTRSATIPTRDSPAGGTVPVKD
SSPRASGTTGDRPVTRSATGPVRDSPAGGSATVPTKDKPVRGSTTIPVKDSSSRGSATVP
RQDSPSRGSATIPVKNSSPRASATTGDRPVTRSATIPTRDSPAGGSATAPVKDSPSHGSA
TTGDRPVTRSATIPTRDSPAGGSATAPVKASPSRGSATTGDRPVSGSATIPARDKPVPGG
GATVPRRDSSPRGGGTGGSAVTGSATIPVRDSSSRSSATTGDRLSRGSATVPIRDRSPRA
TAVGDRPGRGSATTGDRLGRSSGNVPVRDRSPRDSGSGDRLGRGSATTGDRPGSSNATTG
DRLGRGSATTGDRPGRGSATTGDRPVAGSGSVPIRDRSPRDSGTGDRLGRGSATTGDRPG
GSNATTGDRLGRGSATTGDRPGRGSATVPVKDSAARDSSSGDRPGRGSATTGDRPVAGSG
SVPIRDRSPRDSGTGDRLGRGSATLPIKDSSDGGHATVPVKDRSARASATPGDMLGRGRA
TVPVKDSAARGSATTGDWPGRGSATVPVKDSAARGSATTGDTPGRGSATVPIRDSTARGS
GTTEDRLDRPVSVGGTAGDRLVTDSGTPPGRDCPSRDSGAPGDRLLSGSATVPVRDSLSR
GTATIVDTSVTSSATIPVGDSPFWASGTPGDSAVAGGATVPIRDCPSTGTAAVVDALVTL
SGTVMDRRILGSVPVPVRASLSRSTVTIVDTPVFVSATVLVGDSIPRVTATIVESRVPGH
AILPVGDMLACGSATVPVRECPSRDGATVPVGAGSVGGSATVPVRECSSRDGDTPGDRHV
TGSPPIMDTPVSGSATIPVRDCPSRDGATLGDRPGSATAPPRPVTPVRVSVIRDGRAGTR
LAPDGLAQRGRSQAGSPVGDTQGQPRSGHREGHTRAGTGSPASHQ
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaggggctggggaccagagctaccaggaagggcactttgtcacctggcggt
gcccggggcggtgccaccgagtccagcacgctgctccaggagctccggggcaacatctcc
aaatccgtgcagagcaaggtggactccatcctgcaggacgtgcagaagttctcggacagc
gacaaactctacctgtacctgcagctgccctcagggcccagcctgggcgagaagagcagc
ggctcctcgctggagctgagcgcgctgggcacggccgagcacatgcacgcctgcagctgg
atccgcaaccacctggaggagcacacggacacctgcctgcccaagcaggacgtctacgac
gcctacaagcgctactgcgacaacctcggctgccgcccgctgagcacggccaacttcggc
aagatcatccgggaaatcttcccaaatatcaaagcccggcgcctgggaggccgcggacaa
tccaagtactgctacggcgggatccggaggaagaccgtggtcagccttcctcccctgccc
agcctggacctcaaagtgaccgagacggcggagctggccgagctggcgcagtcctacagc
agcgaggtgacggaggccgcgtgtgccctgacgtgcgactgggccgagaagatcctgcgg
cgctccttcaacaacatcgtggaggtggcgcagttcctgctgcagcagcacatcatcagc
ccccgctcggcccacgccgacctgctcatggccatggtggtccaagaaaacacggacaag
cccccccaggaccctcggccacccgcagcccccaagaagaacggcctggacccctcggac
agcggccaggagcaggccaagaaggacggcgtccccaaaggccacgtccagccgcggccg
gagaagaagaagccgccggagcccccgcggccggccagcagcccgcaggtgaacgccctg
gtggcccggctgccgctgctgctgccccgcatgccgccctcggagcgacccccgggcccc
ggcgccgccccggtgcgcccagcgccgccggtgctggtgcccaggctgacggcggcgccg
ctgggcggcacggtgaaggtggcgctgccgctgcccgtgggcaccgcgctggccccgggc
ggcgccggcgccgcggggctgctgagcccgcccgccgccatccccgtgctcaacgtgctg
ctgcccggcgtgggggtccccgcggccgagacccccggcggcagcgcccgggcggcgggg
gacggcgagggacagcgcggcaaggccaccaagcgggccctggagggagcaggggacggc
gccgcgcacaagaggaggcgcgggaggccccgcaagcggccggaggacgcggcgatgtca
cccgaggacgtggaggtccccaagggggaggagggcggggattcgcccccaggggggtca
cccggggctggcagtgccaccgtgcctgctggggacaggggggtcgctggcgctgctgct
gagagtggtggggacagcatggaggttgatagtgacacgggggctgatggggacagcccg
gtccgtggcagtgccagcgtcccccttggggacagctcagtcagtggcagtgccagcgtc
ccccttggggacagctcagtcagtggcagtgccagcatcccccttggggacagctcagtc
agtggcagtgccagcatctcccttggggacagctcagtcagtggcagtgccagcatctcc
cttggggacagcttggtcaatggcagtgccaccaccccacttgaggacagcccagctgag
ggaagtgccaccatcccccttagggacagcctagtcagtggcagcatccctggtgatgga
tctgctggtggtggcagtgccactgtcccccctagtgacacctcagtcagtggcagtgcc
agcgtcccccttggggacagcccagtcagtggcagtgccagcgtcccccctagtgacagc
tcagtcagtggcagtgccactgtccccattagtgacagctcagtcagtggcagtgccact
gtccccattagtgatagctcagtcagtggcagtgccagcgtctcccttggggacagctca
gtcagtggcagtgacactgtccctgttagtgacagctcagtcagtggcagtgccagcgtc
tcccttggggacagctcagtcagtggcagtgccactgtccctgttagtgacagctcagtc
agtggcagtgccagcgtcccccttggggacagctcagtcagtggcagtgccactgtccct
gttagtgacagctcagtcagtggcagtgccagcgtcccccttggggacagctcagtcagt
ggcagtgccactgtccctgttagtgacagctcagtcagtggcagtgccagcgtccccctt
ggggacagtctggtcagtggctgtgccagcttccccagtggtggctctcctggcggtggc
agtgccactgtctctgtcagggacagctcacccatggtcagtgacactgaggatgggctg
gacactggcagtgccaccactgaggacaggccagtcgctgccagtgccaccagggaggac
gggccggtcaccgccagtgccactgtccctgtcacggacagctcctccagtgacagtggc
accactgaggacaggccagacactggctgtgccactgtccctgtcacggacagctcctcc
agtgacagtgccaccatggaggacaggccagttgctgccagtgccaccactggggacagg
cttgtcactggctgtgccaccacagaggacagaccagtcaatggcagtgccactgtccct
gtcacggacaggccggaccctggcaatgacaccagccctgtcagggacagctcacccatg
gtcagtgacactggggacagaccagtcactggcagtgccactgtccctgtcagggacagc
tcctccagtgccagtggcaccgctggggacaggccggtcaccaggagtgccaccattccc
accagggacagtgccaccctccctgtcagggacaagccagtccctggcagtgccagtgtc
tgcagtaaggacagcccctccagggccagtgtccctggtgacaggtctgttgctagaagt
gccactgtccccaccgctggtggcagtgccaccatccctgtcaaggacagtccatccagg
atcagtgccaccactccggacaggcccatcaggggcagtgccaccattagggacagcctg
gctggtggcagtgccactgtccccatcagggacagcacagctggtggcagtgccaccatc
cctgtcaaggacagtgcatcccaggccagtggcaccgctggggacagaccggtcaccagg
agtgccaccaaccctgtcagggacagcccagctggtggcagtgccactacacctgtcaag
gacagtctggccaggggcagtgccaccactggggacagcccatcccggggcagtgccacc
atccctgtcaagaacagctcgcccagggccactgccaccactggggacaggccggtcacc
aggagtgccaccattcccaccagggacagcccagctggtggcactgtccctgtcaaggac
agctcacccagggccagtggcaccactggggacagaccggtcaccaggagtgccactggc
cctgtcagggacagcccagctggcggcagtgccaccgtccccactaaggacaagccagtc
cgtggcagtaccaccatccctgtcaaggacagctcatcccggggcagtgccactgtcccc
aggcaggacagcccatccaggggcagtgccaccatccccgtcaagaacagctcgcccagg
gccagtgccaccactggggacaggccggtcaccaggagtgccaccattcccaccagggac
agcccagctggtggcagtgccactgcaccagtcaaggacagcccatcccatggcagtgcc
accactggggacaggccggtcaccaggagtgccaccattcccaccagggacagcccagct
ggtggcagtgccactgcaccagtcaaggccagtccatcccggggcagtgccaccactggg
gacaggccagtcagtggcagtgccaccatccctgccagggacaagccagtccctggtggc
ggtgccactgtccctaggagggacagctcacccaggggcggtggcactgggggcagcgct
gtgactggcagtgccaccatccctgtcagggacagctcctccaggagcagtgccaccact
ggggacaggctgagcaggggcagtgccaccgtccccatcagggacaggtcacccagggcc
actgctgttggggacaggccgggcaggggcagtgccaccaccggggacaggctgggcagg
agcagtggcaatgtccccgtcagggacaggtcacccagagacagtggcagtggggacagg
ctgggcaggggcagtgccaccactggggacaggccaggcagcagcaatgccaccactggg
gacaggctgggccggggcagtgccaccactggggacaggccgggcaggggcagtgccacc
actggggacaggccggtcgctggcagtggcagtgtccccatcagggacaggtcacccaga
gacagtggcactggggacaggctgggccggggcagtgccaccactggggacaggcctggc
ggcagcaatgccaccactggggacaggctgggccggggcagtgccaccactggggacagg
ccgggtaggggcagtgccaccgtccctgtcaaggacagcgcagccagagacagtagcagt
ggggacaggcctggcaggggcagtgccaccactggggacaggccggtcgctggcagcggc
agtgtccctatcagggacaggtcacccagagacagtggcactggggacaggctgggcagg
ggcagtgccactctccccatcaaggacagctcagacggtggccatgccactgtccctgtt
aaggacaggtcagcaagagccagtgccacccctggggacatgctgggcaggggcagggcc
actgtccctgtcaaggacagcgcagccaggggcagtgccaccactggggactggccgggc
aggggcagtgccaccgtccctgtcaaggacagcgcagccaggggcagtgccaccactggg
gacacgccgggcaggggcagtgccaccgtccccatcagagacagcacagccaggggcagt
ggcaccactgaggacagattggacaggccggtcagcgttggtggcactgctggggacagg
ctggtcactgacagtggcacccctcctggcagggactgcccctccagggacagtggcgct
cctggggacaggctgctctctggcagtgccactgtccccgtcagggacagcctatccagg
ggcactgccaccatcgtggacacgtctgtcaccagcagtgccaccatccctgtcggcgac
agcccattctgggccagtggcacccctggggacagcgcggtggctggcggtgccaccgtg
cccatcagggactgcccgtccacgggcactgccgctgtcgtggacgcgctggtcactctc
agtggcactgtgatggacaggaggatcctgggcagtgtccccgtccccgtcagggccagc
ctgtccaggagcactgtcaccatcgtggacacgcctgtctttgtcagtgccaccgtcctc
gtcggggactccatccccagggtcaccgccaccatcgtggaatcgagggtgcccggccat
gccatcctccccgtcggggacatgctggcctgtggcagtgccaccgtccctgtcagggag
tgcccgtccagggacggtgccaccgtccctgttggggccgggtcagtgggtggcagtgcc
accgtccctgtcagggagtgctcgtccagggacggtgacacccctggggacaggcacgtc
actggcagtccccccatcatggacacaccagtcagtggcagtgccaccatcccggtcagg
gactgcccgtccagggacggcgccacgcttggggacaggcctggcagtgccaccgcgccc
cccaggcccgtcactcccgtccgcgtcagtgtcatcagggacggcagggcgggcaccagg
ctggcaccggacggcctggcacagcggggtcgcagccaggccgggtcccccgtgggggac
acgcagggacagccccgctccgggcaccgcgagggacacacgagggcggggacagggtcc
cctgcgtcacaccagtaa
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