Anomalospiza imberbis (cuckoo-finch): 137464910
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Entry
137464910 CDS
T11605
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03013
Nucleocytoplasmic transport
aib03015
mRNA surveillance pathway
aib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137464910 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
137464910 (NCBP1)
03015 mRNA surveillance pathway
137464910 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aib03019
]
137464910 (NCBP1)
03041 Spliceosome [BR:
aib03041
]
137464910 (NCBP1)
Messenger RNA biogenesis [BR:
aib03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
137464910 (NCBP1)
Spliceosome [BR:
aib03041
]
Common components
Common spliceosomal components
Cap binding complex
137464910 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
ApoA-II
Motif
Other DBs
NCBI-GeneID:
137464910
NCBI-ProteinID:
XP_068032592
LinkDB
All DBs
Position
Z:complement(58487322..58561479)
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AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQAESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKK
DRWQERHILRPYLAFDSVLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDGEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSTDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgacagcgatgggcagccccacaagaggcggaggacg
tccgagccgtcggaaattgaggagaggctcgagtcgctcatctgcagggtgggggagaag
agtaattcatctttggagagcaacctggagggtctagctggcgttttggaagctgatctg
ccaaattacaaaagcaagatactaagaatactgtgtactgtcgcacgtctgctaccagaa
aagcttactgtttacacgacattggtgggcttgctgaatgccaggaactacaattttggt
ggagaatttgtggaagccatgattcgccagcttaaagaatgcctgaaagtaaacatgtat
aatgaagctgtgcatttagtacgttttctgtccgatcttgtgaattgccatgtaatagct
gcaccttcaatggtagctatgtttgagaactttgtgagtgtgacacaggaggaggatgta
ccccaagtgcgatgtgactggtatatgtttgcttttctgtcatctttgccttgggttgga
aaggagttatatgagaagaaggatgctgaaatggatcgtctcttgtctcaggcagaaagt
tatctgaaacgccgccagaagattcatgtacccatgctgcaagtgtggactgctgacaaa
ccacatccacaggaagagtatttagactgcctttggtctcagattcagaaattgaaaaaa
gaccgttggcaggagcggcatatcctgcggccctacttggcttttgacagcgttctctgt
gaggcgctgcaacacaatctgcctcccttcacacccccacctcacactgaagattctgta
tacccgatgccaagggttatttttaggatgtttgactacacggatgaccctgagggtcct
gtcatgcctggcagccactctgttgagagatttgtaatagaggagaacctccactgcatc
atcaaatctcactggaaagagagaaagacttgtgctgcacagctgttgagctatccggga
aataacaagatccctttgaactaccatatcgtggaggtaatatttgcagagttgtttcaa
ctgccgtctccaccgcatattgaagtcatgtacacaacgctgctgattgagctgtgcaaa
cttcagccgggctccttaccacaagttcttgcacaagccaccgaaatgctctacatgcgt
ttggacacaatgaatacaacatgtgtggacagatttattaactggttttcacaccacttg
agcaactttcagttccgttggagctgggaagactggtcagattgtcttactcaggacctt
gaaaaacccaaacccaaatttgtgagagaagttttggaaaagtgtatgagactctcctac
catcaacgaataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtgtgcatttacaaatacggagatgagagcaataggtctcttcctggatatactgtggca
ctctgtttaacaattgcaattaaaaataaggccagcaatgatgaaatcttcagcatttta
aaagacgtacctaatccaaaccaggatgatgatgatggtgaaggatttactttcaaccct
ctgaaaatagaagtctttgttcagactctgctccatctagctgcaaaatcttttagccac
tccttcagtgccctggcaaagtttcatgaagtcttcaaaacacttgctgaaagtgatgag
gggaagctccatgttctgagagttgtgtatgaggtttggaagaatcatccacagatgatt
gctgtgctcgtggacaagatgattcgaacgcaaattgttgactgtgctgcagtagcaaac
tggatcttttcttcagagctggcacatgattttaccaggttttatatctgggagatctta
cattccacaattcgtaagatgaataagcatgtcctgaagattcacaaagaactggaggag
accaaagcaagattggccaggcagcacaaaagacgagacagtgatgatgatgatgacgat
gatgaccgaagcactgatcgggaagatggaccactggaagagcagatagaacgcttgcag
gaaaaagtagagtcagcccagagtgagcagaagaatctctttcttgttatattccagcgt
ttcattatgttgttaacggagcacttagtgcgctgcgagactggtggaattgatgtattt
acaccctggtacaagagctgtatagagaggttgcagcagatcttcctgcagcaccaccag
ataatccagcagtacatggtgacactagagaacctcctgtttacagctgaactggaccac
cacattctggctgtgtttcagcagttctgtgctctgcaggcctga
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