Anomalospiza imberbis (cuckoo-finch): 137466736
Help
Entry
137466736 CDS
T11605
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137466736 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aib03041
]
137466736 (DHX16)
Enzymes [BR:
aib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137466736 (DHX16)
Spliceosome [BR:
aib03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
137466736 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
nSTAND3
Flavi_DEAD
nSTAND_NTPase5
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
137466736
NCBI-ProteinID:
XP_068034517
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MIPELRKRSRREYLAKREREKLEELEQEIQDEELLFGEEALTAPERRELRYKRRLRDLAR
DYKRAGAQEQLERSSRYHIPEETRDKKIPEREEAQEEPLAPRDEQRRWEEQLLGAAALRF
GARDAARQQRGPDYELLLEEEEMVQFVSAARLEGTDPQKDVPEAVPEAERRRQSLQDGRR
ALPIFPFRDELVAAVAQHQVLVIEGETGSGKTTQIPQYLHEEGYTRGGMKIGVTQPRRVA
AMSVAARVAVEMGTKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVI
MVDEAHERTLHTDVLFGLIKDIARFRPQLKVLVASATLDTERFSAFFDHAPVFRIPGRRF
PVDIYYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEACVELLQERCRRLGS
RLPELLVLPIYANLPSELQARIFQPTPPGARKVVVATNIAETSVTIDGIVYVLDPGFCKQ
KSYSARTGMESLVVTPCSRASANQRAGRAGRVAPGKCFRLYTAWAFQHELEETAVPEIQR
ADLGALVLLLKSLGINDLIHFDFLDPPPHETLVLALEQLYALGALNHLGELTTLGRRMAE
LPVEPMLAKMILASEQYGCTEEVLTVAAMLSVNNAVFYRPKDKVLHADSARVAFSVPGGD
HLVLLNVYNQWVASGHSLQWCYEHFVQARSLRRARDVREQLQGLMERVEIAPSSCGGNLD
LVRKAITAGFFYHTARLARGGYRTVKHQQPVFIHPNSALFALQPRWVLYHELVCTSKEFM
RQVMEIDSAWLLEVAPHYYQAKELEDGSGRKMPKKAGKSREELG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgagctgcgcaagcgctcccgccgcgagtacctggccaagcgggagcgggag
aagctggaggagctggagcaggagatccaggacgaggagctgctcttcggggaggaggcg
ctgacggcgcccgagcgccgcgagctgcgctacaagcggcgcctgcgggacctggcccgc
gactacaaacgggccggggcccaggagcagctggagaggagcagccgctaccacatcccc
gaggagacgcgggacaagaagatcccggagcgggaggaggcgcaggaggagccgctggcg
ccgcgggacgagcagcggcgctgggaggagcagctgctgggggcggccgcgctgcgcttc
ggggcgcgcgacgccgcccggcagcagcgcggccccgactatgagctgctgctcgaggag
gaggagatggtgcagttcgtcagcgccgcccgcctcgagggcaccgacccccaaaaggat
gtccccgaggccgtccccgaggccgagcgccgccggcagtcgctccaggacggccgccgg
gccctgcccatcttcccgttccgcgacgagctggtggcggccgtggcccagcaccaggtg
ctggtgatcgagggcgagacgggctcggggaaaaccacccagatcccccagtacctgcac
gaggagggctacacgcggggcgggatgaagatcggggtgacgcagccgcggcgcgtggcc
gccatgagcgtggccgccagggtggccgtggagatggggacaaagctgggcaacgaggtg
gggtacagcatccgcttcgaggactgcacgtcggagcgcacggtgctcaagtacatgacg
gacgggatgctgctgagggagttcctgacggagcccgacctggcctcctacagcgtgatc
atggtggacgaggcccacgagcgcacgctgcacacggacgtgctcttcggcctcatcaag
gacatcgcgcgcttccggccgcagctcaaggtcctggtggcctcggccacgctggacacc
gagcgcttctcggccttcttcgaccacgcgcccgtcttccgcatcccgggccggcgcttc
ccggtggacatctactacaccaaggcgcccgaggccgattacctggaggcctgcgtggtg
tcggtgctgcagatccacgtcacccaaccccccggggacatcctggtcttcctcaccggg
caggaggagatcgaggcctgcgtggagctgctgcaggagcgctgtcgccgcctgggctcg
cgcctgcccgagctgctggtgctgcccatctacgccaacctgccctcggagctgcaggcc
cgcatcttccagcccacgccccccggcgccaggaaggtggtggtggccaccaacatcgcc
gagacgtcggtgacgatcgacggcatcgtctacgtgctggacccgggcttctgcaagcag
aagagctacagcgcccgcacgggcatggagtcgctggtggtgacgccctgctccagggcc
tctgccaaccagcgcgcgggccgcgcgggccgcgtggcgcccgggaagtgcttccggctc
tacacggcctgggcgttccagcacgagctggaggagacggcggtgcccgagatccagaga
gccgacctgggagcactggtgctgctgctcaagagcctgggcatcaacgacctgatccac
tttgacttcctggaccctcccccccacgagacgctggtgctggcgctggagcagctgtac
gcgctgggggcgctgaaccacctgggggagctcaccacgctgggccggcgcatggcggag
ctgccggtggagccgatgttggccaagatgatcctggcgagcgagcagtacggctgcacg
gaggaggtgctgacggtggccgccatgctctcggtgaacaacgccgtgttctaccggccc
aaggacaaggtgctgcacgccgacagcgcccgcgtggccttcagcgtgcccgggggcgac
cacctggtgctgctcaacgtctacaaccagtgggtggccagcggccactccctgcagtgg
tgctacgagcactttgtgcaggcgcgctcgctgcgccgggcccgcgacgtgcgggagcag
ctgcaggggctgatggagcgcgtggagatcgccccgtcctcctgcgggggcaacctggac
ctggtgcgcaaggccatcacggccgggttcttctaccacacggcgcgcctggcacggggc
gggtaccgcacggtgaagcaccagcagccggtgttcatccaccccaacagcgccctgttc
gccctgcagccccgctgggtgctctaccacgagctggtgtgcacctccaaggagttcatg
agacaggtgatggagatcgacagcgcctggctgctggaggtggccccccactattaccag
gccaaggagctcgaggacggcagcggccgcaaaatgcccaaaaaagccggaaaatcgcgg
gaggagctgggctga
DBGET
integrated database retrieval system
