Anomalospiza imberbis (cuckoo-finch): 137467482 Help Entry 137467482         CDS       T11605                                  Symbol DCHS1 Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism aib  Anomalospiza imberbis (cuckoo-finch) Pathway aib04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:aib00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     137467482 (DCHS1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:aib04515]     137467482 (DCHS1) Cell adhesion molecules [BR:aib04515]  Cadherins   Cadherin related    137467482 (DCHS1) SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Ig_Cad99C_N Ig_CLSTN Cadherin_CELSR2_9th RET_CLD1 PepSY Sharpin_PH CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  137467482 NCBI-ProteinID:  XP_068035072 LinkDB All DBs Position 2:158705..201500 Genome browser AA seq 3266 aa AA seqDB search MEQMKRSTMLLLELLILGGLRAGMSSAVLGTLDLQIDEEQPAGTIIGDISAGLPPETSAY MYFISAQEGSGVSTDLGIDENTGIIKTARVLDRETRDHYSFIAVTPEGITVEVNIQVNDI NDHAPAFPKQHSTFQIPEHTPIGSRFPLDPAFDADSGLLNTQGYMIKGGNVGQAFRLETR RGPNGVLYLDLVVSNILDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFN QSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDARTGVIKL NKGLDYEVRKVHELVVQARDKAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS EGAQPGQYVARISVSDPDYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERD SYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEYKQSIPEVVYPGSFVLQVTA RDKDQGPNGEVRYSILHGRDTHSSWFTIDPATGIITTAAPLDYEKDPQPQLTVLATDRGT PALSSSAVVHVALQDVNDNEPVFKSNFYNVSLKENTPVGTCFLQVTATDSDSGAFGSLSY SIGSGIGSIIPTQFSIDKHSGQLCTVHPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFL EDTNDNRPVFYPLEYAASISTQSMPGTAVLRVTAHDKDEGLNGRVTYRIVLGNSPPLFSL NKDTGVISLSWSLSGKANTLVQLVISAQDGGGLQAQPNARVNISIVEGTVSPPVFDQAQY FFSVPEDMPQGASVGAVQAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLRTSLPLDHE SQSVLILDVQARSGSPPAYSNTRVKISVSDVNDNVPAFPAPSDSILLPEATEPGTTVYTL QAEDRDSGANGQVTFELVSGGEGTFVVERASGAVRLLGALQYESISAYSLAIVARDGGIP QLSSTFTLLVHVQAEDDNGPIFDTLTYRVEVQEGVPVSTRFLQVRALAHDVESTALTYHL RADGDAASFGIVPESGWLYVKSALDRETRDLYVLTVLASVGGTGAAADTRKTGTSTVRIS ITDENDNSPRLSEERYFFTVSENQAPGSTVGRVMASDRDAGQNSRLTYRLLQHDPNFLIH TQTGEVSTKHSLDREQQSNFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHVGSG QELTVQVLEEKPSGLLVASLQAKDPDEGENGTIIYSLIGAWAERFTLHVATGELRTATVL RRTERAEYIFTVTASDRGTAPRSTSAIVRVQVLPSSRVLPRPDATVLTLHPLEGVKPGSV IGSVAPLDAPARGQLIYTVVGGGGDGTFVVDSMTGEIYAARELDYEAGARHVLQVSAEDT QHGYPSSRLVLVQIHVQDCNDQAPTFPEDPITIVVPENAQAGSSIFTFQALDGDGVGPNS QVRYALLHLEPPGAPFQLDGRSGQLSLRQGLDREATASFLLVVEATDQARNVSQRRSAAV TARVFVTDENDNAPVFLSPATVSVMEDQPTGFVALHVVAQDSDLGENGRVSYFLRAGNAD GRFHLNPSTGALSIVRALNREEVAQHNLTVVATDHGFPRLSATQLLSVLVLDVNDEAPVF EKPEYEAHIMENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGLIVTTSPL DREEQEQHVLTVYARDSGLPPSLTKATVWVTVGDENDHAPHLESESCSVEVPENQSRVAL YTLRATDPDGGENGRLEYRVAGGDPGQDFSLDPISGVLSTAHALDREQIASYSLIVVVQD HGSPPRSATMSVTVQVLDLNDNAPSFAQASYTVEVPEDLPVGALVLQLVAEDPDEGTNGQ VSYYLGNESLGMFQVEPQSGRIRSAQALDRERQPTYSFLAKAVDSAPWEPKSAAVRVTVV VRDVNDHVPAFLQSPLTVNLSRHTPLKQVVATMRAEDRDAGANASILYRFATPSSAFAIN SYTGDIQLLQPLGSLSQRQRTLFVLAMDLGQPALSSTGVVVIHVQEEPYRGLRFPRSTSD VALAENAAPGTEVASVQAMHTGGSSGHITYSIISGNERNTFLIQPSSGAISVQDSSSLDF EASPRLRLVIQAETTASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVL ADDLDQGVNGQVTYAINQSLPMPGLYHIDPQTGTITTAAILDREIWSQTRLVVTAMDRGT PPLMGSATLTVVVMDINDNSPTIPVPWEIRVPENTLLGTQIAQLTGNDVDSGPALSYTLL LEGDMADTFGVLRYGGHIALTGPLDREQCSRYTLTLRASDTRHETEANLTVLVEDVNDNV PTFSQVFYQVLLPEHTPAGSVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSNGTLFT TRQVEFNASQPTLDLVVEARDHGSPSLSSWATVQLQVLDVNDHSPRFQEPCYNASVPEDL RPGTTVLMLEAGDADLSRENAGFDYTIVSGNGGNAFQVESRVARAGGQLRTQGALVLVES LDFEAIPVYNLTVAASDRGLPQRSATVPVLITVQDINDNPPVFSRAEYRAAVSEAALPGT ELLRVAAHDADSGPRGRVHYTISSGDQHGLFQLHESTGALSLARPLDREAQALHTLVVRA TDTPGGHFALVPVAIEVKDINDNKPYFPVEVLSASIRENLPPGTLVTTLRAVDADTGAFG ELRYVVLEQAVGDPSMGDGRDAFAVNGSSGELRSRLTFDYERAKAFQLLVRATDAGNASA TVTVRVLVTGEDEYDPIFLSPSFNFEVPEGARKGQSIGRVLATDEDEGVDGVVLYTLAKP SPYFAINQTTGSIYLRVDSQPQAGAGRTKREPREMSLDVQARSPLPASRVASAQVTIDVT HTSFGLAPDLNLLLVAVAASLGVVVVLAAVAIVLALVRSRQRRGHKKAEGEGALARAQSG SLQKLGREEPALPGAEHIYHQALPGYGTEPAGPYTRGGSLDPSHSSGRGSAEAAEDDEIR MINEYPRVASITASMQEHIAARGPDSGIQQDADQLSDISCEPAALESAQWFKSKKGSGLL LPGPPLQLYREDGGGSAFLGVRCGLSVSSQPQDYTFPEDGKPSVEGSLTAIVASDEELRG SYNWDYLLNWCPQFQPLASVFTEIARLKDESSLRKPFPAKPKAEPKPRIDPPPLITSVAH PGAKSVPPKPPPGRTFPHPSSLRRSPISHEGSISSSAMSPSFSPSLSPLAARSPVVSPFG ISQGPSTSTISAEHSLEPPEEAELRI NT seq 9801 nt NT seq  +upstreamnt  +downstreamnt atggagcaaatgaagaggtcaacaatgcttctgctggagctgcttattcttgggggcctg agagcggggatgagctctgctgtcctgggcaccctggatctacaaatagatgaggagcag ccggctggcaccatcattggggacatcagtgctggcctaccccctgaaactagtgcctac atgtatttcatctcagcacaggagggcagtggcgtctccactgacttggggatagatgag aatactgggatcatcaaaacagctcgtgtcctggaccgggagactcgggaccactacagc ttcattgctgtcaccccagagggcatcacggtggaagtgaacatccaagtgaatgacatc aatgaccatgccccagcatttcccaaacagcacagcacctttcagatcccagagcacaca cccattggcagcaggtttcccttggacccggcctttgatgctgacagtggtctcctgaac acacaaggctacatgattaaaggagggaatgtggggcaggccttccgcctggaaacgcgt cgaggacccaacggggtcctgtatttggacctggtggtcagcaacattctggatcgggag aaccgttcatcatactcactgctgctggaagcctacgatgggggttctcctccccggagc acccagatgacactggatgtgtccattcaggacatcaatgacaatgcccccagcttcaac cagagccgctatcatacactcatttcagagaatctgaaacctggcagcagcatcctgcag gtctttgcctctgacgcagatgaaggtgacaatggggatgtgatttatgagatcaaccga cggcagagtgatcctgaccagtacttcaccattgatgcccggactggagtcatcaagctc aacaagggtctggactatgaagtgagaaaggtgcatgagctggtggtgcaggcaagggat aaggctgtccatcctgaggtcaccacagcctttgtcactatccatgtgcgtgactacaat gacaaccagcccaccatgactatcatctttctgagtgaggatggctccccacagatctcc gagggagcccagcccggacagtatgtggcacgcatttctgtttccgatcctgactatgga gagtattccaacgtcaatgtcacactggagggaggagatggcaagtttgccctcactacc aaggacaacataatctatctgatctgcgtggaccaacttctggatcgggaagaaagagac tcctatgatctgcgggtgacagctactgactcaggaacaccccctctccgggcagaatca gcctttgtgctgcaggtgatggatgttaatgacaatcccccgctcttcgaccagcaggag tacaagcagagcatccctgaggtggtgtaccccggcagctttgtcctgcaggtgacagct cgtgacaaggaccagggtcccaacggggaggtgcggtacagcattctgcatggccgtgac acccactccagctggtttaccattgaccctgccactggcatcatcaccactgctgccccg ctggattatgaaaaggatcctcagcctcagctcactgtgctggccacagaccggggaacc cctgccctctcttcctcagctgtggtgcacgtggccttgcaggatgtcaatgacaatgag ccagtgttcaagagtaacttctacaatgtgtccctgaaggagaacacccctgttgggacc tgcttcttgcaggtgacagccacagactcagacagtggtgcatttggctccctttcctac tccattggctctggcatcggcagcatcatccccacacagttcagcattgacaagcactca gggcagctgtgcacggtgcatcccctggaccgtgatgagggcacgtctgcctatgacttc accatcactgctgtggatgggggcggcctgaactccatggtgtatgtgaaggtgttcctg gaggacacgaatgacaaccggccagtgttctacccgctggagtacgctgccagcatcagc acccagagcatgccggggacagccgtgctgcgtgtcaccgcccatgacaaggacgagggg ctgaatgggagggtgacataccgcatcgtcctgggaaactcgcccccgctcttctccctc aacaaggacacaggtgtcatttctctgtcatggtctctgagtggcaaagccaacaccctg gtgcagctggtgatctctgctcaggatggagggggcctgcaggcacagccgaatgcccgg gtaaacatcagcatcgtggagggcacagtctcaccccctgtctttgaccaagctcagtac ttcttcagtgtgcctgaggacatgccacagggcgccagtgtgggggctgtccaggcccag aacccgccaggtcatgcggatgacatcttctattccatctcctcgggggaccctcatggc tatttctccatcgactcggcctcagggcagctccgcaccagcctgcctctggatcacgaa tcccagtcagttctcatcctggatgtccaggcccggagcggttcaccccctgcctacagc aacacgcgtgtgaagatctccgtgtcagatgtgaacgataacgtgccagcattcccggct ccctctgactccatcctgctgccagaggccacagaacctgggaccacggtctacaccttg caggctgaggaccgtgacagtggtgccaatggacaggtgacctttgagctggtgtcgggg ggtgagggcaccttcgtcgtggagcgtgcctcgggggcagtgcggctccttggggccctg cagtacgagtccatctcagcctacagcctggccatcgtggcccgggacggcggcattccc cagctcagctccaccttcacgctgctggtgcacgtgcaagccgaggatgacaacggaccc atctttgacactctcacctaccgtgtggaggtgcaggagggtgttcccgtctccacccgc ttccttcaggtgagggccctggcacatgatgtggaatccacggccctcacctaccacctg cgtgcagatggggatgctgccagcttcggcatcgtgcctgagagcggctggctgtacgtc aagagtgccctggaccgggagacgcgggacctgtacgtgctgacggtgctggcctcggtg ggaggcaccggggctgcggcagacacacggaaaaccggcaccagcaccgtgcggatcagc atcaccgacgagaacgacaacagccctcggctgagtgaggagcgctacttcttcaccgtg tctgagaaccaggctcctggcagcactgtgggaagggtgatggcaagcgaccgggacgcc gggcagaacagccggctcacctaccgcctgctccagcatgaccccaactttcttatccac acgcagacaggagaggtcagcaccaagcacagcttggatcgggagcagcagtccaacttc cagctcctggtgattgtgcaggatgggggagcaccacctcgcagtgccaccggaaccatc tatgtcactgtgctggatgagaatgacaacgctcctgctttcctccatgtgggcagtggt caggagctaactgtgcaggtgctggaagagaagccgtcgggactcctggtcgcctccctg caggccaaggaccctgacgagggggagaatgggaccatcatctactccctgataggagcc tgggcagagcgtttcactctgcacgtggctaccggagagctgcggacggccacggttctg cggcggacggagcgggccgagtacatcttcacggtgacagccagcgaccgcggcacggca cctcgcagcacctcagccatcgtccgtgtccaggtgttgccatcctcccgtgtgctgcca cggcctgatgccaccgtgttgaccctgcatcctctcgagggggtcaagccagggtctgtg attggttcagtggcacccctggacgcccccgcacgaggacaactgatctacacggtggta ggaggtggtggggatggcacctttgtggttgatagtatgacaggggagatttacgctgcc cgtgagctggactatgaagctggggcacggcacgtgctccaggtgagtgctgaggacacg cagcacggctatccctccagcaggttggtgctggtccagatccacgtgcaggactgcaat gaccaggcacccaccttccccgaagaccccattaccattgtggtgcctgagaatgcccag gctggctcctccatcttcaccttccaggcgctggatggggatggagtgggccccaacagc caggtgcgctatgctctgctgcacctggagccacccggagcccctttccagctcgacggc cgctcggggcagctgagcctgcgccagggcctcgaccgagaggccactgcctccttcctg ctggtggtggaggccacagaccaggcccgcaacgtcagccagcgccgctcggccgctgtc acagcccgcgtgtttgtcaccgacgagaacgacaatgcgcccgtcttcctctccccggcc accgtcagcgtcatggaggaccagcccacaggctttgtggcactgcacgtggtggcccag gacagtgatctgggagagaacggacgtgtgagctacttcttgcgagcaggcaacgctgat ggccgcttccacctcaaccccagcacgggtgcactctccattgtgcgggccctgaaccgg gaggaggtggcacagcacaacctgacagtggtggccacggaccacggcttcccacgcctc tcggccacacagctgctgtccgtgctggtgctggacgtcaatgacgaggctcctgtcttt gagaaacctgagtatgaagcccacatcatggagaacctgccggccggcagcccagtgctg caggtgctggccacggaccgggatctgggtgccaatgggcaggtgtcctatgggggtctc tccggggggccgttctccatccacccacagacagggctcattgtcaccacgagtcccctg gaccgggaggagcaggagcagcacgtgctgacagtctatgcgcgggacagcggcctgccg cccagcctcaccaaggccacggtgtgggtcacggtgggggatgagaatgaccatgcaccc cacctggagagtgagtcctgctccgtggaggttcctgagaaccagagtcgtgtggcactc tacaccctgcgggccactgatcctgatggtggggagaacggacgcctggaataccgggtg gcaggtggagaccctggacaggatttcagcctagaccccatctccggtgtcctctccact gcacatgccctcgaccgagagcaaattgcttcctacagcctcattgtagtggtgcaagac cacggctccccgccacgcagtgccaccatgtcggtgactgtgcaggtgttggacctcaat gacaatgcacccagctttgctcaggccagctacacggtggaggtgccagaggacttgcca gtcggtgccctggtgctgcagctggtggctgaagacccagatgagggcaccaatgggcag gtctcctactacctgggcaatgagtcgctgggcatgttccaggtggagccacagagcggg cgcatccggagtgctcaggcactggaccgggagcgccagcccacctacagcttcctggcc aaggcggtggactcggcaccgtgggagcccaagagcgcggctgtgcgtgtcactgtcgtg gtgcgagatgtcaacgaccatgttccggccttcctgcagagcccgctcaccgtcaacctg tcccgccacacgccgctcaagcaggtggtggccaccatgagggctgaggacagggacgcg ggtgccaatgcctccatactgtaccgctttgccacccccagctccgccttcgcaatcaac tcctacacgggggacatccagctgctgcagccccttggctccctcagccagcgccagcgg acgctctttgtgctggccatggacctggggcagccggcgctctcctccacaggggtggtg gtgatccatgtgcaggaggagccctaccgggggctgcgctttcctcgcagcaccagtgat gtggccctggccgaaaatgccgccccaggcactgaggtggcgagtgtccaggccatgcac acggggggctcctcggggcacatcacctacagcatcatcagtggcaacgagaggaacacc ttcctgatccagcccagctcaggtgccatctcagtgcaggactccagtagcctggacttt gaggccagcccccgtctgcgcctggtgatccaggcagagactacagcttcctttggcttt atggccataaacctcaacctccaggatgtgaatgacaacttgccccgcttccagctgcag aactatgtggcattcatctgggagtcacagagctatgactcacctgtcatccaggtgctg gcagatgacctggaccagggagtgaatgggcaggtgacttatgccatcaaccagtccctg ccaatgccgggcttgtaccacattgaccctcagactggcaccattaccactgctgccatc ctggacagagagatctggtcccagacccgcttggtggtgacagcgatggaccgaggaacg ccaccgctcatgggttcagccacactgaccgtggtggtgatggacatcaatgacaatagc cctaccatcccggtcccctgggagatccgtgtccctgagaacacactgctgggcacccag atagcccagctgactgggaacgatgtggactcaggccctgcactctcctacacgctgctg ctggagggggacatggcagacacctttggggtgctgcgctatggtggccacattgccctg acggggccactggaccgtgaacagtgcagccgctacaccctcaccctgcgcgcctctgac actcgccacgagactgaggccaacctcaccgtccttgtggaggatgtgaacgacaatgtg cccaccttcagccaggttttctatcaggtgctgctgccagagcacacacctgctggcagt gtcatcctcactgtgagtgctactgaccccgactcagggagcaacggggacatcaccttc cacctggctgtgcccagccctgatgttgccatcgaccccagcaatgggaccctcttcacc acacggcaggtggagttcaatgccagccagcccaccctggacctggtggtggaggcccgt gaccatggctctcccagcctctcatcctgggccacagtgcagctccaagttctggatgtt aacgaccacagcccccgcttccaggagccatgctacaacgccagcgttcccgaggacctg cgcccaggcaccactgtgctaatgctggaggcgggtgacgccgacctctcccgggagaat gctggctttgattacaccatcgtcagcgggaacggcggcaacgccttccaggtggagagc cgggtggcccgggccgggggacagctccgcacgcagggagccctggtgcttgtggagtcc ttggacttcgaggccatcccagtgtacaacttgaccgtggcagcctcggaccggggcctg ccgcagcgcagtgccacggtgcccgtgctgatcactgtgcaggacatcaatgacaacccg cccgtgttcagccgggccgagtaccgtgcagcggtgagcgaggccgcgctgcctggcacc gagctgctgcgcgtggcagcccatgacgccgactcggggccacgcggccgcgttcactac accatcagctcaggtgaccagcacgggctgttccagcttcatgagagcacaggggccttg agcctggcacggccactggatcgggaggcccaggcgctgcacacactggtggtgcgggcc acggacacaccaggcgggcactttgcactggtccccgtggccattgaggtgaaggacatc aacgacaataagccatacttcccggtggaggtgctgagcgccagcatccgggagaacttg ccccccggcacactggtcaccacgctgcgtgctgtcgatgccgacaccggcgcctttggg gagctgcggtacgtggtgctggagcaggcagtgggggaccccagcatgggggacggccgg gacgcctttgctgtcaatgggagctctggggagctgcgctcccgcctcacctttgactat gagcgagccaaagccttccagctcctggttcgggccaccgacgctggcaatgcctcggcc actgtgactgtgcgggtgctggtgacaggggaagatgagtatgatcccatcttcctgagc ccctccttcaacttcgaggtgcctgagggtgcacgcaaagggcagagcattgggcgggtg ctggccacggatgaggatgagggggttgacggtgttgtgctgtacaccctggcaaagccc tcaccatactttgccatcaaccagactacgggctctatctacctgcgtgtggacagccag ccccaagccggagctgggcgcaccaagagagagccacgggagatgagcctggatgtgcag gcacgcagcccactgcctgcttcccgtgtggcctctgcgcaggtcaccattgatgtcacg cacacctcctttggcctggcacctgacctcaacctcctgctggtggccgtggctgcctcg ctgggcgttgtggtggtgctggccgctgtggccatcgtgctggccctggtgcgctcccgg cagcgccggggccacaagaaggcagagggagagggggccctggcccgtgcacagagcggg tccttgcagaagctgggtcgtgaggagccagcactgcctggggctgagcacatctaccac caggcgctgccagggtatgggactgagccggcagggccctacacacggggcggctccctg gacccctcgcattccagcggccgtggctctgctgaagccgctgaggatgatgagatacgg atgatcaatgagtacccacgtgtggccagcatcacagcctccatgcaggagcacatcgct gcccgcggccctgactctggcatccagcaggatgctgaccagctctccgacatctcctgt gagccagctgcattggagagcgcccagtggttcaagagcaagaagggctctgggctgctg ctgccggggccacccctgcagctgtaccgtgaggacgggggaggcagcgccttcctgggc gtccgctgcggcctcagcgtctcctcacagccccaggactacaccttcccagaggacggc aagccctccgtggagggctcgctcaccgccatcgtggccagcgacgaggagctccgcggc agctacaactgggattacctgctgaactggtgtccccagttccagccactggccagtgtc ttcacggagatcgcccgcctcaaggatgagagctccctgcgcaagcccttcccagccaag cccaaggcagagcccaagccccgcatcgaccccccgcccctcatcacctcagtggcccat ccaggggccaagtctgtgccccccaagccaccaccaggcaggaccttcccgcacccatcc tccctgcgccgctcgcctattagccacgagggttccatttcgtcctccgccatgtcgccc agcttctccccatcgctgtccccgctggccgcccgctcccctgtggtctcgcccttcggc atctcacaggggccatccacctccaccatcagtgctgagcactcgctggagcctcctgag gaggccgagctcaggatttag

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