Anomalospiza imberbis (cuckoo-finch): 137469350
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Entry
137469350 CDS
T11605
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03030
DNA replication
aib03410
Base excision repair
aib03420
Nucleotide excision repair
aib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137469350 (RFC3)
03410 Base excision repair
137469350 (RFC3)
03420 Nucleotide excision repair
137469350 (RFC3)
03430 Mismatch repair
137469350 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aib03032
]
137469350 (RFC3)
03036 Chromosome and associated proteins [BR:
aib03036
]
137469350 (RFC3)
03400 DNA repair and recombination proteins [BR:
aib03400
]
137469350 (RFC3)
DNA replication proteins [BR:
aib03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137469350 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
137469350 (RFC3)
Chromosome and associated proteins [BR:
aib03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
137469350 (RFC3)
DNA repair and recombination proteins [BR:
aib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137469350 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
137469350 (RFC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
AAA
Rad17
AAA_22
AAA_16
ABC_tran
nSTAND6
AAA_2
Sigma54_activ_2
AAA_11
Motif
Other DBs
NCBI-GeneID:
137469350
NCBI-ProteinID:
XP_068038095
LinkDB
All DBs
Position
2:79715056..79722556
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWADKHRPGALARLDFHREQAARLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITAPSKKKIEISTIASNYHLEVNPSDAGNNDRVVIQELLKTVAQSQQ
LETSTQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSMSKIIGPIQSRCL
AVRVPAPSIEDICHVLSSVCKKEGLTLPQELARRIAEKSGRNLRKALLMCESCRVQQYPF
TADQDIPEMDWEVYLRETANAIVGQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLTELL
NNCDGQLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLDDIMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtgggccgacaagcaccggcccggcgccctcgcccgcctcgacttccaccgc
gagcaggcggcgcggctccgcaacctggttcaatgcggtgactttcctcatttgttggtg
tatggaccatcaggagctggaaaaaagacgagaataatgtgtttattaagggaattatat
ggtgcaggagtggagaaactgaggattgagcatcagagtataacggcaccttctaagaag
aagattgaaattagcaccattgcaagtaattatcaccttgaagttaacccaagtgatgcg
ggaaacaatgatcgtgtggtaattcaggagctcttgaagacagtggcacagtcccaacag
cttgagacaagtactcaacgagactttaaagtggtgctgttaacagaagttgacaaactt
actaaagacgctcagcatgctttgcgaagaacaatggagaagtacatggcgacctgcagg
ttgatcctgtgctgcaattcaatgtcaaaaattataggacccattcaaagcagatgcctg
gctgtacgagtgcctgctcccagcattgaagatatctgccatgtcttgtccagtgtgtgt
aagaaagagggcctcactcttcctcaggaactggctcgaagaattgcagagaaatctggc
aggaatcttcggaaagcactacttatgtgtgaatcatgcagagtacaacagtatcctttt
actgctgatcaagacattcctgagatggactgggaagtttatttgagagaaactgcaaat
gctattgttggtcaacagacaccacaaaggcttttagaagtccgtggacgactttatgaa
ctcctgacccactgcatccctcctgagattataatgaagggtctcctgacagaacttcta
aataattgtgatggacaactgaaaggagaagttgcacagatggcggccttctatgaacac
cgcttgcaactgggcagcaaagccatttatcatctggaagcatttgttgcaaagtttatg
gcaatttacaagaagttcatggaggatgggctggatgacataatgttttaa
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