KEGG   Anomalospiza imberbis (cuckoo-finch): 137471078
Entry
137471078         CDS       T11605                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
aib  Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:aib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    137471078 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aib03021]
    137471078 (TAF5L)
   03036 Chromosome and associated proteins [BR:aib03036]
    137471078 (TAF5L)
Transcription machinery [BR:aib03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     137471078 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     137471078 (TAF5L)
Chromosome and associated proteins [BR:aib03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     137471078 (TAF5L)
    STAGA complex
     137471078 (TAF5L)
    TFTC complex
     137471078 (TAF5L)
    SAGA complex
     137471078 (TAF5L)
    SLIK complex
     137471078 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Aladin ANAPC4_WD40 WDR90_beta-prop_4th DSE1_N CFAP251_N Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 PAC11 Beta-prop_NOL10_N Tricorn_2nd Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF4 ASA1 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN WD_LRWD1 Ge1_WD40 eIF2A PD40 Nbas_N
Other DBs
NCBI-GeneID: 137471078
NCBI-ProteinID: XP_068041197
LinkDB
Position
3:complement(72379416..72399485)
AA seq 591 aa
MVMKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVV
SAAPCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDS
FYSRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRY
LQSDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDVPASILQNEAA
LDLLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLR
SRKLKSEPHLVDVSRIRLACDILDEEEEEDDNAGTEMKILRGHCGPVYSTRFLSDSSGLL
SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYP
LRIYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSP
NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD
IRNTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq 1776 nt   +upstreamnt  +downstreamnt
atggtcatgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaag
cgccgtcagtatgtggactcggaaggtcccctaaaacaagggctgaggctgtgtcagacc
gctgaagagatggcagctaatctcacagtccaatctgagtctggttgtgccaacgtcgtg
tctgcagctccctgcctggcagagccacagcaatatgaagtacaatttggacgattacgc
aattttctgacagattcagattctcagcacagccatgaagtgatgcctcttctatatccc
ctctttgtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagt
ttttacagccgcttccatggcatgttcttgcagaatgccagccagaaagatatcattgaa
cagttgcagactaccatgactattcaagatatcctgtccaacttgaagctccgggccttt
ctggacaacaaatacgtcatccgccttcaagaggacagctacaactaccttcttcgctac
ctccaaagtgacaacaacaacgccctgtgcaaagtcctgaccttgcacattcacttggat
gtgcagcccgccaagaggactgactaccagctctatgctggtgggagctcctcacgcaat
gagagcaacggcctggaacccagcgacgtgccagcttccattctgcagaatgaggcagcg
ctggatttactgcaggacagcattaaacgtgtcaaggatgggcccccttccttaaccacc
atctgtttctatgccttctataacacagagcagttgctgaacactgcagagatttcacca
aatagcaagctgcttgctgctgggttcgataattcatgtgtgaagctgtggagcctgcgc
tccaggaagttgaaatctgagccccaccttgttgatgtgtcccgcatccgtttggcttgt
gacatcctagatgaggaggaggaagaggatgacaacgcaggcacagaaatgaagatcctg
agaggacactgtggacctgtgtatagcacaaggttcctttcagacagttcaggactctta
tcttgttctgaggacatgtccatcaggtactgggacctcggaagctttacaaacactgtg
ttgtaccaaggacatgcctatcctgtctgggatttggatattagcccttgcagcctatac
tttgccagcggttcccatgatcgcactgcaaggctctggtcgttcgatcggacgtacccg
ctgcgaatatacgcgggccatttggcggacgtggactgcatcaagttccaccccaattcc
aactacttagcgactggttccacagacaaaaccgtgcgcctgtggagcactcagcagggc
aactcggtgcggcttttcaccgggcaccggggccctgtgctggcgctcgcgttttccccc
aacggtaagtacctggcatcagcaggtgaagaccagcggctgaagctgtgggacttggca
tcaggaactctttacaaagaactgagggggcacacagacaacataaccagccttactttt
agccctgacagtagtttaattgcttcagcatcgatggacaattcagttcgggtctgggac
attcggaacacttactgcaatgcccctgcggatgggtcttccagtgaactggttggtgta
tataccggacagatgaataatgtactgagcgtacagttcatggcctgtaatcttcttcta
gtgactggaattgcacaagaaaatcaggaacattaa

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