Anomalospiza imberbis (cuckoo-finch): 137471120
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Entry
137471120 CDS
T11605
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04517
IgSF CAM signaling
aib04519
Cadherin signaling
aib04520
Adherens junction
aib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137471120 (AFDN)
04519 Cadherin signaling
137471120 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
137471120 (AFDN)
04530 Tight junction
137471120 (AFDN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
AFDN
DIL
PDZ
FHA
PDZ_6
RA_3
PDZ_2
RA_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
137471120
NCBI-ProteinID:
XP_068041267
LinkDB
All DBs
Position
3:complement(74443831..74559918)
Genome browser
AA seq
1918 aa
AA seq
DB search
MSGGGGGSREEERRKLADIINHWNANRLDLFEISDPTEDLEFHGVMRFYFQDKAAGNFAT
KCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLN
WNKDDREGRFVLKNENDTLAPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREKEA
LRQASDKDDRLLHGDDIENFRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQE
FRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYGLEKENPKDYC
IARVMLPPGAQHSDDKGAKETILDDDECPLQIFREWPSDKGVLVFQLKRRPPDYVPKKTR
KITDGKPLKGKERVDGSGYGSCLPPEKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKP
KLYRLQLSVTEVGNEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQR
ISETTMLQSGMKVQFGSSHVFKFVDPTQDHIISKRSTDASLMVKGPRHKTGAVQETTFDL
EGDIHSGTALPASKSTSRLDGDRTSSASSTAERGMVKPMIRIDQQDYRRQDSRSQDTHGP
ELILPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDITPA
ERTHKVIAIVNKMVNMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSR
ITVDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENNPQRPKIDDVLHTLTGAM
SLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTAPDSGLCSHYWGAIMRQQLGHIEAWA
EKQGLELAADCHLSRIVQATTLLTMDKYSHADVPNINSTCFKLNSLQLQALLQNYHCAPD
EPLIPTELIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNVPS
GLQEFLDPLCQRGFCRLTPHPRSPGTWTIYFEGADYESHLSHENAELAQPLRKEPEIITV
TLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLS
QERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRGKPRPKSEGFELYNNSAQ
NGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKNAYASGTTTKI
TSVSTGNLCTEEQILPPRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQSQWPNYEEKPQ
LQAESNHSINSTMQRVARSQEELRDKVFQPERNRLEVVIRKDVEYIDRKSDSDQWMNSSV
DSSTSSQEHLNHSSKPVSPGSCLTKSGPGRWKTPATSQPTPVAISQPIRTDLPPPPPPPP
VHYAAEFDELQMDLPLPPPPPPNQIGAQASSQVAAAERKKREEHQRWYEKEKARLEEERE
RKRREQERKLGQMRSQPLIPAQPVVPPVSLQQVKSEKPSTLQRSQETVIRELQPQQQPRT
IERRDLQYITISKEELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQNKPDR
TAEENDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDEVDTMLIMQRLEAERRARQTAVP
AISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERTRREAEEKRRQEEEYY
SRLEAERRRQHDEAERRLLEPDEPGLYRPPLPREYELPSPTPSSNAPPPPPQRNTSYLKT
QVLSPDTIYTAKFVAYNDDDDEEEDSNLAGQDKYSSTRKSYGDFPPATLKPQQPSRQPRP
VSDGIFLSNSFQSSPVNANSTTAKKSQPPPPSNKPSFIHASSSKGINSYTGSTGTAAGEV
YRDPRDKRSKSQDADLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMELENELNTK
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggcggcggcagccgggaggaggagcggcgcaaactcgccgacatcatc
aaccactggaacgcgaaccggctggacctgttcgagatcagcgaccccaccgaggatctc
gaatttcatggagtaatgagattctactttcaagacaaagcagctggaaattttgcaaca
aaatgtatccgtgtctctagcactgccacaacacaagatgtgatagaaactcttgcagag
aagtttcgaccagacatgcgaatgttatcatcccctaaatactcactttatgaagtgcat
gtcagtggagaagaaagaagattagatgtggatgagaagcctcttgttgtacagttaaac
tggaacaaagatgatcgcgagggaaggtttgtcctcaagaatgaaaatgatacacttgct
ccaaagaaagctcagagtaatgggcctgaaaaacaagaaaaagagggagtaattcagaat
ttcaagcgaactctctcaaaaaaagaaaaaaaagaaaaaaagagacgtgaaaaagaggca
ttgcgacaagcatcagataaagatgacagacttcttcatggggatgatattgagaatttt
cgccttgcagctgaggtttacaaagatatgcctgagaccagcttcactcgcacaatatcc
aatcctgaggtggttatgaaacggcgacggcagcaaaaactagagaagagaatgcaggag
tttcgcagttctgatggcagaccagactcaggtgggacgctgagaatttatgcagacagt
ttaaaaccaaatataccatacaagacaatcctgctgtccaccacagatactgcagacttt
gcagttattgaagcactggaaaaatatggtctggaaaaagaaaatcccaaggattattgt
attgctcgtgtcatgctgcctcctggtgctcagcactctgatgataaaggtgctaaagaa
actattcttgatgatgatgagtgtccactgcagatattcagagagtggcctagtgataaa
ggagtactggtctttcagttgaaaaggcggcctcctgattatgtcccaaagaaaaccagg
aagataactgatggaaagccattaaaggggaaggaaagagttgacgggtctggctatggc
tcttgccttcctcctgagaaactaccatacctggtagaattaagcccagggagaaggaat
cactttgcctactacaactatcacacttacgaagatggttctgactccagagataagcca
aagctctatcgtctacaattaagtgtcactgaagttggaaatgaaaaatttgatgacaat
tccattcagttatttggtccaggaattcagcctcatcactgtgacctcactaatatggat
ggagttgttactgtaaccccgagaagcattgatgctgaaacctatgtggaaggtcagcgt
atttcagaaaccaccatgctgcaaagtgggatgaaggttcagtttgggtcttctcatgta
tttaagtttgtggatcctactcaggaccatattatttccaaaagatctactgatgcaagt
cttatggtcaaaggtccgagacacaaaactggagctgtgcaggaaaccacatttgatctg
gagggagatattcacagtggaacagcattaccagcaagcaagagcaccagcaggctggac
ggtgacaggacatcatctgcatccagcacagccgagcgaggaatggtgaagccgatgatt
agaatagaccagcaggattaccgcagacaggacagcagatctcaggatacccacggacca
gaactgatactgcctgccagtattgaattcagggaaagctctgaagatgccttcttatct
gccattataaattacacaaatagctcgacagttcatttcaaactgtcaccaacgtatgtt
ttgtatatgacatgtcggtatgtattgtccagccaatacagacctgacatcactcctgct
gagcgtactcacaaagtcattgcaatagtcaacaagatggtgaacatgatggaaggagtg
atacaggaggtagaccaggttgatcagaaacagaagaatattgctggggcccttgccttt
tggatggcaaatgcatctgaactactcaatttcataaagcaagacagagatcttagccga
attactgtggatgcacaagatgttttggcacacttggttcaaatggcattcaagtacctg
gttcattgtctgcagtcagagcttaataactacatgccagcattccttgatgatccagag
gaaaataatcctcagaggcctaaaatagatgatgtgctgcataccttgactggagccatg
tccctgttgcgaagatgtagagtaaatgctgctctgaccatacagctcttctcccagctg
tttcattttatcaacatgtggctttttaacagattagttacagccccggattcagggtta
tgttcacattactggggagctatcatgcgccagcagcttggccacattgaagcctgggca
gaaaaacaaggtttagaattggctgctgattgccacctgagcagaatagtacaggcaacc
acattgcttaccatggacaaatactcacatgcagatgttccaaatattaacagtacttgc
tttaagctgaattctctgcagctacaagccttgttgcagaattatcactgtgctccagat
gaaccactcatcccaacagaactgatagagaatgtagtaactgttgcagaaaatacggct
gatgaacttgctcgcagcgatggccgagaagttcagctggaagaggatcctgacttacag
ctaccttttctcttaccagaagatggctattcctgtgatgttgtcagaaatgttccaagt
ggtttacaagaatttttagatccactctgtcaaagaggtttttgtagactaacacctcat
ccacggtcaccaggcacgtggacaatatactttgaaggtgcagattatgaaagtcacctg
tcccatgagaatgctgagctggctcagcctttgagaaaagaacctgaaattataactgta
acactaaaaaaacaaaatggaatgggactgagcatcgttgctgccaagggtgctggtcaa
gacaaacttggaatatatgtcaagtctgttgtgaaaggaggtgctgcagatgtggatggt
cgtctggcagcaggggatcagttgcttagtgtggatggtcgaagtttggtgggcctgtcc
caggagagggcagcagagcttatgactaggacaggttctgtagtaacactagaagtagca
aaacaaggagcaatttaccatggtctggcaaccctgcttaatcagccatccccaatgatg
caaagaggtaaaccccgaccaaagagtgaaggttttgagctgtataacaattccgcgcaa
aatggatcacctgaaagtcctcagctgccatggacggagtacagtgaaccaaagaagcta
ccaggggatgacaggttgatgaagaacagggccgatcatcgttccagtcccaatgtagca
aatcagcctccaagccctggggggaagaatgcttatgcatctggaactaccaccaaaata
acctcagtctctactggaaatctttgtacagaggaacagattctgccaccacgacctgaa
gcttatcccatcccaacacagacctatactagagaatatttcacattcccagcttcaaag
tcacaggatcgaatgggtccagctcagagtcagtggccaaattatgaagaaaaaccacag
cttcaggcagaaagtaatcattctatcaattctaccatgcagcgtgtagctcgttcccag
gaggagctcagagacaaagttttccagccagagaggaatcgtttggaagttgttatacgg
aaggatgtggagtacattgatcggaagtcagacagcgatcagtggatgaattcatctgtg
gattctagcacatctagccaggaacacctaaaccattcctccaaaccagtgtcgcctggt
tcttgtttaactaaaagtggacctggccgttggaaaactccagccactagccagcccact
ccagtggccatttcccagcccatcagaacagatcttccccctccaccaccacctcctcca
gtgcattatgctgctgaatttgatgaactgcaaatggatttgcctctgcctccccctcct
cctccaaatcagataggagcacaagcatcctcccaggtagctgctgctgagcgtaaaaaa
agagaagagcatcagaggtggtatgaaaaggaaaaggcacgtttggaagaagaacgagaa
aggaaacgccgtgagcaggagagaaaactgggccaaatgcgttctcagccactaattcct
gctcagcctgtggttcctcctgtctcccttcaacaagtgaaatcagaaaagccctcaact
ttgcagaggtctcaagaaacagttattcgagagctgcagccccaacaacagccacggact
attgagcggagagatttgcagtacattactatcagcaaggaagaactgtcctctggtgac
agcctctctccagatccgtggaaacgggatgcaaaggagaaactggagaagcagcaacag
atgcacattgtggacatgctgagtaaagagattcaggaacttcagaacaagcctgatcgt
acagcggaagaaaacgaccgcctccgcaaactcatgcttgagtggcagttccaaaagcgc
ctgcaagaatcaaagcaaaaggatgaagatgatgatgaagaggaggatgatgaggtggat
actatgctcatcatgcagcgactggaggcagaaagaagagcaaggcagactgctgtgcca
gcaatctctgttctagatttgttacaggatgaagaacgcagacggcagcaacaattggaa
gaaatgaggaaacgagaagcagaagacagggccaggcaggaagaagagcgcagacaacaa
gaggaggagcggaccaggagagaggctgaagaaaagaggcgccaggaagaggagtattac
agtcgcttagaggctgaaaggcgcaggcagcatgacgaagctgaacgaagattgctggaa
cctgacgagcctggtctgtacagacctccgcttccacgggaatatgaactcccatcccca
accccttcatctaacgctcctcctcccccacctcagcgaaacacctcttacctcaaaaca
caggtcctctcccctgacacgatttatactgccaagtttgttgcatacaatgatgatgat
gatgaggaggaggattccaatctagcaggtcaggataagtactccagcacaagaaaatct
tatggtgactttcctcctgccacccttaagccacagcagccctcccgccagcctcgccca
gtttcagatggcatctttctttccaactcattccagtcatctcctgtcaatgccaacagt
actactgccaaaaaaagccagcccccacccccatcaaacaaaccaagtttcatccatgcc
agcagctctaaaggaataaattcatacactggatctacaggaacagctgctggggaagtg
tatcgggatccaagagacaaaagatctaaaagtcaagatgcagatttacctggagcacca
gaaaatctgacgttcagggaacgccagcgacttttttcacagggtcaggatgtatccaat
aaagtaaaagcttctaggaaactaatggaactggaaaatgagttgaacacaaaataa
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integrated database retrieval system