Anomalospiza imberbis (cuckoo-finch): 137471704
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Entry
137471704 CDS
T11605
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04517
IgSF CAM signaling
aib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137471704 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137471704 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aib04812
]
137471704 (SPTBN1)
Cytoskeleton proteins [BR:
aib04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
137471704 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
137471704 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
137471704
NCBI-ProteinID:
XP_068042337
LinkDB
All DBs
Position
3:complement(104763940..104879872)
Genome browser
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHVESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PEPKVAEDGDSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKES
SPIPSPTSDRKAKSGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHN
VYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKR
EKDKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacggtagcgacagattatgacaacattgaaatccaacagcagtacagcgat
gtcaacaaccgctgggatgtcgacgactgggacaatgagaacagctctgctcggctgttt
gagcgctcccgcatcaaggccctggctgatgaacgtgaggcagttcagaagaagactttc
acaaagtgggtgaattcccacttggctcgtgtgtcctgccgaattacagacctgtacact
gaccttcgagatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctc
cagttcctgaaagagcaacgagtgcacctagaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggaccattatcttgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaacgtcaatatccacaactttacgaca
agctggagggatgggatggcgttcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaacgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccctgaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttggctgtcgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatacgagtctctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaattcgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttatcgcacagtggagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtcttgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acaaagaagcacgaggccatcgagacggacatcgcggcgtatgaggagcgggttcaggcc
gtggtggcggtggcaaaggagctcgagactgaaaactaccacgacatcaaacgcatcact
gcaaggaaggacaatgttatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcggctggagatgaaccttgggctgcagaaaattttccaggaaatgctgtacatt
atggactggatggacgagatgaaggtgcttttgctgtcccaagactacggcaaacatttg
ttgggagttgaagacctgctgcagaaacacgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccactgatggcgaaggt
tacaagccctgtgacccacaggtgatcagggaccgcgtggctcatatggagttctgctac
caggagctctgccagctcgcagccgagcgccgtgcacgcctcgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaggagggctggatcagggagaaggagcagatc
ctgtcatctgatgactatgggaaggacctaaccagtgtcgtccgactcttgagtaaacac
aaggcgtttgaggatgagatgagtggccgcagcggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcaattatctgccattaggaaaaagcggcta
gaggaagcctctctccttcaccagttccaggctgatgctgatgacattgatgcatggatg
ttggacatcctcaagattgtctccagtaatgatgttggccatgatgaatattccactcag
tccttggtcaagaagcacaaagatgtggctgaagagattgcgagctaccggccgaccatc
gactctcttcatgagcaggccaaggctctgccacaggagcacgtggagtctccagatgtg
caaggcaggttgtccggaatcgaggagagatacaaagaggttgctgagctgacccggctg
cgtaaacaggccctgcaggatacccttgctctctataagatgttcagtgaggcagatgct
tgcgagctttggatcgatgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaacaac
caggcatcccgtgtggctgtggtgaaccagattgccaggcagctgatgcacagtggccac
cccggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttcaga
gaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactaccat
cttgaatgtaatgaaaccaaatcctggatcagggaaaagactaaagtgattgaatccaca
caagacctgggtaatgacctggctggagtgatggccttgcagaggaagctgacgggcatg
gaacgggacctggtggccatcgaagccaagctcagtgacctgcagaaggaggcagagaag
ctggaatcggagcatcctgaccaggcacaagcaatcctttcacggcttgcagagatcaat
gatgtgtgggaagaaatgaagaccacgctgaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgcaattgcctccgaagatatgcccaacaccctgacagaggctgagaagctgctc
actcagcatgagaatatcaagaatgaaatcaacaactacgaggaagattatcagaagatg
agggacatgggtgagatggtgacacaagggcaaactgatgctcagtacatgttcctacgc
cagcgcctacaggctttggacaccggatggaatgagctccacaaaatgtgggagaacagg
caaaatctcctttcgcagtctcatgcctaccagctgtttctcagagataccaagcaggca
gaagctttccttaataaccaggagtatgttctggcgcacacggagatgccaaccaccttg
gaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgccaat
gaagaaaagatcaatgcagttgtggagacaggcaggaggctcgttagtgatgggaacatt
aactctgataaaatccaggagaaagtggactctattgatgacaggcataggaagaaccgt
gaagcagccagtgaacttttgatgagactgaaagataacagggatctccaaaagtttctt
caggattgccaagagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcctatgatgaggcgaggaacctgcacagcaaatggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggagggaatgcagctcatt
gcagagaaaccagagactgaggccgtggtgaaggagaagctgacaggtctccaccaaatg
tgggatgaacttgaatccaccacccagaccaaggctcagcgtctcttcgatgcaaacaag
gcagagctttttacccagagctgtgcagacctggataagtggctgaatggtttggagagc
caaattcagtcggatgactacggaaaagatctcaccagtgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaaagc
caggcaagggctttgagccaagagggcaagagcacagatgaagtcgatggcaaacgcctt
actgtagaaaagaaattcttggagctgctggagcctttgaatgagagaaaggccaacctg
ctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgggtc
ggagagaggatgcccatagctacatctactgaccatggacacaacctacagactgtgcag
ctactaataaagaaaaatcagacccttcagaaagaaatccagggtcaccagcctcgtatc
gatgacatttttgagaggagtcagaacattatcacagagagcagccccaatgctgaagtc
attcagcagagacttgcagacttgaagcagctgtggaacctcctcatcgaggagacggag
aagcgccacaagcgcctggaggagtctcacagggctcagcagtattacttcgatgcagcc
gaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagataat
cacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctatgcgggc
ctgaaggaccttgctgaagagaggaggggcaagctggacgagaggcaccggctgttccag
ctcaaccgcgaggtggatgacctggagcagtggattgccgagagggaggtggtggcaggg
tcccatgagctgggccaggactacgaacacgtcacgatgctgcaggagcggttccgggaa
tttgcccgggacaccgggaacatcgggcaggagcgggtggatactgtcaaccacatggct
gatgagctcatcaactccggccactcagacgctgccacgatcgccgagtggaaggacgga
ctcaatgaggcctgggcagatctcctggagctcattgacacgagaacacaaatccttgca
gcctcttatgaactgcacaaattttaccacgatgccaaggagatcttagggcgtatccaa
gacaaacataagaaactgcccgaggagcttggtagagaccaaaacacagtggaaacacta
cagagaatgcacacgacgtttgagcatgatatccaggccctgggcacccaggtgcgacag
ctgcaggaggatgcagcacgcctccaggctgcctacgctggggacaaggcggatgacatc
cagaagagggaaaacgaggtcctagaggcatggaaggcactgctggatgcctgtgagggc
cgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgggat
ctcatgctctggatggaagacgttatccggcagatagaagcccaggaaaagccaagggat
gtttcatctgtggaactcctcatgaacaatcaccaggggatcaaagcagaaattgatgcc
cgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaacac
tatgcatctgaggagatcaaggaaaagctcctgcagctgacagaaaagagaaaagaaatg
attgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcaccagttc
tccagagatgcaagcgtggctgaggcctggctgctgggacaggagccctacctgtccagt
cgtgaaatagggcagagcgttgatgaggtggagaaattaatcaagcggcacgaagcattt
gaaaaatccgcagctacctgggacgagaggtttgcagcgctggagagactgaccacgctg
gaactgctggaggtgcgtcggcagcaagaggaggaggagaggaagaggcagccgcccact
ccggagcccaaggttgcagaggatggagactcccagcagcaatgggatgggacaaaagga
gaacaagtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaaact
gcagaaaccaatgaaatggtcaatggagctgcagaacagaggacgagttccaaagagtcc
agtcccattccttccccgacatcagaccgcaaagccaagagcggcgttcaggcccagact
gctgctaccctcccagccaaaacacaggagatcccctcagcccagatggagggcttccta
caccgcaagcacgagtgggagacacacagcaagaaagcctccagcaggtcatggcataac
gtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcaaaagctgctgct
tctggcatcccttaccacaacgagatccccgtcagtttgaaggacgcagtctgtgaagta
gcagtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaatgaa
tacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcacatca
gcgatctcttcagacaaaatcgaagtgtccccgaccacccagagcactccagcctccagc
cgtgcccagaccctgcctgccagtgtcacaataaccagcgagtccagccctggcaagcgg
gagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
