Anomalospiza imberbis (cuckoo-finch): 137472067
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Entry
137472067 CDS
T11605
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137472067 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aib03019
]
137472067 (FIP1L1)
Messenger RNA biogenesis [BR:
aib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137472067 (FIP1L1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
137472067
NCBI-ProteinID:
XP_068042813
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Position
4:546101..584715
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AA seq
580 aa
AA seq
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MSTGEAERLSADADGAAGDEEEEWLYGDENEAERPEEEKSSAPPPPGSEEEAAENGVVKT
VAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYGSSGAKVKG
LDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMG
LEILPVTSTTNKITAEDKAMEVRPSAEILDGRYHLLKVQQGRTGNLEKELAVQSTKPDFT
SPPALFKSGIPTSRRISGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFTK
PPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLIP
TIDSGHSSGYDGRPVRAFSYGSDDEVELKTNDLLKVRKASKADKQKGRSPQYFTFPHPAG
SAPSWSSLLDTSKQWDYYARREKDRERERERSRDRDRDRDRDRDRDRTRDRERDRDHSPS
SSAFNSDEERYRYRDYAERGYDRHRTSREKEDRHRDRRHREKEETRHKSSRSNSRRRHDS
EEGDSHRRHKHKKSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggcggagcggctgtcggcggacgccgatggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaagcagagagaccagaggaagaaaaatct
agtgctccacccccacctggaagtgaagaggaagctgcagaaaatggcgttgtgaaaacg
gtggcagaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgatgttcaa
gtcaccataggggatattaagacaggagctccacagtttagttatggagcagcacctgtg
aatctcaatattaaggcaggaggacgagcttatggatcttctggtgcaaaggttaaagga
ctggatctagatgcaccagggagtattaatggtgtgccacttctggaagtagatttagat
tcatttgaagataaaccttggagaaagccaggggctgatctctcagattattttaactat
ggcttcaatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatgggt
cttgaaatcttgccagttacctcaaccacaaataaaattacggctgaagacaaagctatg
gaagtaagaccaagtgcagagattctcgatggcagataccatcttttaaaggtacagcaa
ggcagaactggaaatttggagaaagagttggcagtgcagtcgaccaaacctgatttcaca
tctcctcctgccttattcaaatcaggaattccaacaagcaggcggatatctggcacaata
gatgtgattggacagaccatcactatcagcagggtggaaggacgacggcgtgctaatgaa
aacagcaacatacaggttctttcagaacgctctaatcctgaagtagacagttttaccaag
ccacctccatttttccctccaggagctccacctactcaccttccaccacctcctttcctc
ccaccccctccaactgtcagtactgctccacctctgattcccccaccaggtataccaata
acagtgccaccaccaggttttccaccaccacctggcggtcctccaccttccctcataccc
acaatagacagtggacattcttctggctatgatggtcgtcctgttcgtgcattttcatat
ggcagtgatgatgaagtggagctcaaaacaaacgatttattgaaagttaggaaagctagc
aaggcagataagcagaaagggagaagtcctcagtacttcacctttccacaccctgcaggt
tctgcaccctcctggtctagtcttttggacaccagcaaacagtgggattactatgcacga
agagagaaggatagggaacgtgagagagagagatcccgagatcgggatcgtgaccgggac
cgagacagagatcgagaccgtaccagagacagggaaagggaccgagatcacagtccgtct
tcaagtgcgttcaacagtgatgaagaacgctacagatacagagactatgcagagaggggc
tacgaccgccataggacaagcagagagaaagaagacagacacagagacaggagacacaga
gagaaagaagagactcgacacaagtcatctcgaagtaacagcagacgtcgtcatgacagt
gaagaaggggatagccacagaaggcacaaacacaagaagtccaaaagaagcaaagaagga
aaggaagccagtggtgaacctgctcctgaacaggaaaacactgaagctgcccctgtggaa
tag
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