Anomalospiza imberbis (cuckoo-finch): 137472414
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Entry
137472414 CDS
T11605
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04010
MAPK signaling pathway
aib04210
Apoptosis
aib04218
Cellular senescence
aib04519
Cadherin signaling
aib04620
Toll-like receptor signaling pathway
aib04621
NOD-like receptor signaling pathway
aib04622
RIG-I-like receptor signaling pathway
aib04623
Cytosolic DNA-sensing pathway
aib04625
C-type lectin receptor signaling pathway
aib04920
Adipocytokine signaling pathway
aib05132
Salmonella infection
aib05164
Influenza A
aib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137472414 (NFKB1)
09133 Signaling molecules and interaction
04519 Cadherin signaling
137472414 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
137472414 (NFKB1)
04218 Cellular senescence
137472414 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137472414 (NFKB1)
04621 NOD-like receptor signaling pathway
137472414 (NFKB1)
04622 RIG-I-like receptor signaling pathway
137472414 (NFKB1)
04623 Cytosolic DNA-sensing pathway
137472414 (NFKB1)
04625 C-type lectin receptor signaling pathway
137472414 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
137472414 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
137472414 (NFKB1)
05168 Herpes simplex virus 1 infection
137472414 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
137472414 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aib03000
]
137472414 (NFKB1)
Transcription factors [BR:
aib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
137472414 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
137472414
NCBI-ProteinID:
XP_068043578
LinkDB
All DBs
Position
4:complement(22515288..22574282)
Genome browser
AA seq
982 aa
AA seq
DB search
MAAEDSYIMGVSDPQMFTVDQFMGMNALFNSTNYITADLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVIAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
SYLQAEGCEDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRRLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGAGGGAGSGFSFPSYGYSAFGGMHFPGT
TKSNAGMKHEGLSNCTAEQERKSCDKQNDQWDMKCDMKVEAVERTECRMSAVNEKKEESV
FSCKTEVSEADCRWQDALFLEKAMQLARRHCNALFDYAVTGDVKMLLAAQRHLTAVQDDN
GDNVLHLAIIHLHTELVKNLLEVMSDLNYNDIINMRNDLYQTPLHLAVITKQAKVVEDLL
KAGADVSLLDRHGNSVLHLAAAEGDDKILSLLLRNEKVSPMVNLPNAEGLSAIHMVVMAN
SMSCLKQLIAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDYVKDDEDDDEGIVPGTTPLDMAANS
EVYDILNGKPYKSAEVLEDSLTQGHLRELNENSKMQLYKLLELPDPTKNWSTLAQKLGLG
ILNNAFRLSPSPSKTLLDNYEVSGGTIQELITALRQMDHTEAIEIIQEALSISRRPSPLE
DSTAKALPSSSPLTFANGETGELYNSRCQDLESTCDSGVETSFRKLSFTYSDSLTSKSSL
TLGKMALGYGHESSGQSNYIAD
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaagattcctatattatgggagtatctgatccccaaatgtttacagtggat
cagttcatgggaatgaatgctttatttaacagtacaaattacatcactgcagacttacct
ctacgaacagcagatggaccatatcttcaaatcatagaacagccaaaacagaggggattt
cgtttccgatacgtatgtgaagggccttcgcatggtggacttcctggtgcctctagtgaa
aagaacaaaaagtcctaccctcaggtcaaaatctgcaattatgttggacctgcaaaagta
attgtccagttagtaactaatgggaaatacgtccacttacacgctcacagcttggtgggt
aaattctgcgaagacggcgtgtgcacggttatcgccggacccaaggacatggttgtaggg
tttgcaaatcttggaatacttcatgtcacgaagaagaaagtgtttgaaactctggaaaca
cgcatgatagatgcttgcaagaagggatacaacccaggactcctggtgcatccagaactc
agctatctgcaggcagaaggatgtgaagacaggcagctaactgaacgagaaagagaaatc
attcgccaggcagccatacagcagaccaaggaaatggatctcagcgtggtgcggctcatg
ttcacagccttccttcctgacagcaacggcagcttcacacggagacttgatcccgttata
tcagatgcaatatatgacagcaaagctcccaatgcctccaacctaaaaattgtaagaatg
gacagaacagcagggtgtgtgacaggaggggaagagatttacctgctctgtgacaaagtt
cagaaagatgatattcaaatacgtttctatgaagaggatgagaatggtggtatgtgggaa
ggctttggagatttttctcctacggatgtacatagacaatttgctattgtgttcaaaaca
cccaaataccgagatgtcaatatcacaaagccagcatctgtgtttgtacaactgcgtagg
aaatctgatctagaaacaagtgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcaaaggaaacgacagaagctcatgcccaacttctccgatggctatggt
ggaggcagtggcaccggaggtggtggcatgtatggaggggcaggtggtggtgctggctct
gggttcagttttccttcatacggatactctgcttttggagggatgcatttccctggcaca
acaaagtccaatgctggcatgaaacatgaaggtctatcaaattgcacagctgaacaagaa
agaaagagctgtgataaacaaaatgaccaatgggacatgaaatgtgacatgaaggtggaa
gccgtggagaggactgagtgcagaatgtctgctgttaatgagaaaaaggaggaatctgtt
ttttcctgtaaaacagaagtaagcgaagccgattgcaggtggcaggatgctctgttcctg
gagaaggccatgcagcttgccaggcgccactgcaacgctctcttcgattatgctgtaact
ggagacgtgaagatgctgttggcagctcagcgccatctcaccgctgtccaggatgataat
ggggacaatgtccttcatttagcaattatccaccttcatactgagctggtgaaaaacctc
ctggaagtgatgtccgatttgaattacaatgacatcattaacatgcgaaatgacctctat
cagacccccctgcatttggcagtaatcacaaagcaggcaaaggtggtggaagacttgctg
aaggctggagcagatgtcagccttctggatcgccatggcaattctgtcctacatttagct
gctgctgaaggagatgacaagattttgagtctgctcctcaggaatgagaaggtatctccc
atggtcaacctccccaatgctgaaggtctcagtgcaattcacatggtggtgatggcaaat
agcatgtcctgcctcaaacagctgattgctgctggagttaatgtcaatgctcaggaacaa
aaatctggacgaactgcattgcacttggctgttgaacaagagaacatccctttggcaggc
tgccttttgcttgagggtgatgcagatgtggacagcactacatatgatgggacaactcca
cttcacatagcagctggaaggggctcaacaaaattggcagcagttctcaaagcagcaggt
gcaaatcctcacattgagaactttgagccattgtttgacctagattatgtgaaagatgat
gaagatgatgatgaagggattgtgcctggaacaacaccactggatatggcagcaaactct
gaggtgtatgacatattaaatggcaaaccctacaagtcagcagaggttttggaggactca
ctcacacaaggacatttgagagagctgaatgagaattccaagatgcagctttacaaacta
ttggaattgcctgatccaaccaaaaactggtccacccttgcacaaaagctgggtcttggc
atacttaataatgccttcaggttgagcccttccccatcaaagactctgctggataactat
gaggtgtctggcggtacaattcaagagctgatcactgctttgagacagatggatcacaca
gaagccatagaaataattcaggaagcactgtccatctcacgcagaccatctcccctggaa
gacagcacagcgaaagctcttccgtcatcatcaccgctcacctttgcaaatggagagaca
ggtgagctctataatagcagatgccaagacctcgaaagtacatgtgacagtggtgtggag
acctccttccgcaagctgagcttcacttactcagactccctgaccagcaagtcctcacta
acacttggcaaaatggccctgggctatggacatgaaagttcagggcaaagcaattacata
gctgactag
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