Anomalospiza imberbis (cuckoo-finch): 137473856
Help
Entry
137473856 CDS
T11605
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aib04131
]
137473856 (TRAPPC8)
Membrane trafficking [BR:
aib04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
137473856 (TRAPPC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
SNAP
Motif
Other DBs
NCBI-GeneID:
137473856
NCBI-ProteinID:
XP_068046002
LinkDB
All DBs
Position
1:43884623..43936680
Genome browser
AA seq
1469 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPLVAALCSEEAERLTRRNNLSFAELVRPFCRLTSEVHMRDPNN
QLHIIKNLKIAVNNIITHPPQPGAIRKLLHDVVSVSQPAEGLVANVITAGDYDLNISDRS
VKASVPWYSNWKETLMELNTSTFYSATTPWFESYRECFLQSMPASDHEFLNHYVACMLVV
SSTEPDPVEQFLKLSQEQHRIQHSSEYSYPKWFIPNTLKYYVLLHDVSTGEEQRADSIYE
EMKQRYGTQGCYLLKINSRVSNRGADEQIPDPWSQYLQKNTIQNQDSYEDYTAVSNKNTD
HLISDGTDSEIKDGLSNNFKTHPLQLDHPSGSLDSTDYMKASTSLQDSKKSNSGTPHGAC
LTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFFATKKWFSGSKVP
EKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLNDQAMLYA
AGALEMAAVSAFLQPGAPRPYPAHYMETAIQTYRDICKNMVLAERCVLLSAEILKSQSKY
SEAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRFSKAGQKKH
ALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVSAFRHILINDSKQPPAQQ
GAFLREYLYVYKNATQLSPDGPLPQLPLPYINSSATRVFFGHDRRPAEGEKQAATHVSLD
QEYDSESSQQWKELEEQVVSVINKGTIPSNFQPTQFCLNRYSDNSKFPLAVIEEPITVEV
SFRNPLKVPLLLTDLSLLWKFQPKDFSAKHDGETKEQGTCDEDMVGTEAIAEFLINSEET
KVARLKLFPHQTGELHILGVVYNLGSVHGAVSLDGIDPSIGLQTGKFVSNGLSVRGRQDL
EIQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFINFPTGLLCGEIRKAYVEFV
NVSKCPLTALKVVSKHPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDPTSVRTALLSS
ASSADFGVGTGGSPEVIQVPLPDAVLLPGASVQLPMWLRGPDEEGVHEINFLFYYEGIKK
HSKMCHRVLRHTAVICTSRSLHVRATVCRSNALGDEEGRGDNMLLFVDVENINTSETGVK
EFHIVQVSSNSKHWKLQKSVNISGDKDTKLASRERAKLCFKAVRCKNSEENYTFADIVFG
NEQIISSASPCADFFFQSLSSEFKRTHVQSHASQRAVKESFDETVRLIQRCSEVDMNIVV
LWKAYVVEDSKQLILEGQHHVALNTVGKEAFSFPQKQGLKKILGNSDWEDLEQELPETVL
LKFFRPENTLVPARPTPEQLSNLIKTSLHYPESFNHSFHQKSLCLVPVTLLLSNCSQAVV
DVMIDLRHKPTSSEALEIHGSFTWLGQTQYKLQLKGQEVYSLQLKACFVHTGVYNLGTPR
VFAKLVDQVTLFETSQQNSMPALIIINNI
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcatccaggactcgttcgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagcggctcacccgcaggaacaacctcagcttcgcc
gagctggtcaggcccttctgccgcctcacctcggaagttcacatgagagatcctaataat
cagcttcacatcattaaaaatttgaagatcgctgtcaacaacatcattactcacccacct
cagcccggtgccattcggaaacttttgcatgatgttgtgtctgtcagtcagcctgctgaa
ggactggtagctaatgtgatcacagctggagattatgatctcaacatcagtgatcgctca
gttaaagctagtgttccttggtacagtaattggaaagagacactgatggaactgaacaca
tccacgttttattcagctactactccttggtttgagtcttacagagagtgctttcttcag
tccatgcctgcatctgatcacgaattcttaaaccactatgttgcatgtatgctggtagtt
tcttctactgaacctgaccctgtggagcagttcctgaagctgtcccaagaacaacatcgg
attcagcacagtagtgaatattcatatcccaagtggtttataccaaacacactcaaatat
tatgtgttactgcatgatgtaagcacaggagaagaacaaagagctgactccatttatgaa
gagatgaaacagagatatggaactcagggttgctatttgctgaaaataaattctcgggtg
tcgaacagaggagcagacgaacagataccagatccttggagtcagtaccttcagaaaaac
actatccagaaccaggattcctatgaagattatactgctgtttcaaacaagaatactgat
cacttgatatcagatggcacagacagtgaaattaaagatggcttgtcaaataactttaag
actcacccccttcaactggatcatcccagtggcagtttggatagcactgattacatgaag
gcttctacatcacttcaagactcaaagaagtcaaattctgggacccctcatggtgcttgt
ttaactctcacagatcacgatcgaattagacagttcatacaggaattcacatttcgggga
cttttgccacacatagagaaaacaattcgacagctcaatgatcagttaatatccaggaaa
ggcttgagtcgatcactgttttttgctactaaaaaatggtttagtggcagcaaggttcca
gagaaaagtataaatgagctcaagaatacttctggtttgctgtatccaccagaagcgcca
gagcttcaaatccggaagatggcagacttgtgctttttggtgcaacactatgaacttgca
tatagctgttaccatacagcgaagaaggacttcttaaatgatcaggcaatgctttatgca
gctggagcgctggaaatggcagcagtatcagcttttcttcagcctggagctcctaggcca
tatcctgctcattatatggagacagcaattcagacttatcgagatatctgcaagaacatg
gttctggctgaacgctgtgtactgcttagtgctgaaatcttaaaaagtcaaagcaaatat
tcagaggcagctgctcttctgattcgtttgaccagtgaggattcagatcttcgcagtgca
ctcctgttggagcaggcagcccattgttttataaacatgaaaagtcccatggttagaaag
tttgcatttcatatgatattggctggccacagatttagtaaagctgggcagaagaaacat
gccttacgttgctactgtcaagccatgcaggtttacaaagggaagggctggtctcttgca
gaagaccacattaatttcaccatcggtcgtcagtcctttacgcttcggcagctggacaat
gctgtgtctgccttcaggcatattttgatcaatgacagtaaacaacctccagctcagcaa
ggagcttttttaagagaatatctttatgtctataagaatgcaacccagctgtcacctgat
ggtcccttaccacagcttcctttaccatatattaacagctcagcaactcgagttttcttt
ggccatgatcgacgaccagcagaaggtgaaaagcaggcagctacacacgtaagcctggat
caggagtatgattcggaatcatcacaacagtggaaggagcttgaggagcaggttgtgtct
gtgataaataaaggaacaataccttcaaactttcaaccaacgcagttctgtttaaatcgc
tactcagataactccaaatttccgcttgctgtgatagaagaaccaataactgtagaagtg
tccttccgaaaccctttgaaagttccacttcttttgactgacctttcattgctgtggaag
tttcaacctaaagacttcagtgcaaagcatgatggagaaacaaaagagcagggtacatgt
gatgaagatatggtaggaactgaagcaatagcagaatttttaattaatagtgaggagaca
aaagtggcaagactaaagctctttccccatcaaacaggggagctacatattctgggagtc
gtttataatcttggcagtgttcatggtgctgtgtcattagatggaatagatccttctatt
ggattacagacaggaaagtttgtttccaatgggttatctgtacgaggacgacaagattta
gaaatccaaggacctcgacttaataacacaaaagaggaaaaaacatcaattaaatatgga
cctgatcgacgtttagatcccattattacagaagaaatgcctttgttagaggtgttcttt
ataaattttcctacagggcttctctgtggagaaatcagaaaagcatatgtagaatttgtg
aacgtaagcaagtgtcctcttactgcactaaaggttgtgtccaagcatccagaatttttc
acttttggtggaaatactgctgttttaacaccactaagtccttcagcctctgagaactgt
agtgcttacaagactgttgtgacagatcctacctctgtgcgaacagcactgctgtcttca
gcttcttctgcagactttggggttggcacgggaggttcacctgaagtaatacaggttcca
cttcctgatgctgttcttcttcctggggcttcagtgcagctgccaatgtggttacgggga
ccagatgaagaaggtgttcatgaaattaacttcttgttttactatgaaggtattaaaaag
cactcaaaaatgtgtcacagagtattaaggcacactgcagttatttgtaccagtcggtct
ctgcacgttcgggctactgtctgcagaagtaatgcacttggggatgaagaaggcagaggg
gacaacatgttgctctttgtggatgtggaaaatatcaatactagtgagacgggtgttaag
gaatttcatatagtgcaagtttcaagcaatagcaagcactggaaacttcaaaaatctgtt
aacatctctggagacaaagatactaaactggctagcagagagagagcgaaattgtgtttt
aaagcagtgagatgcaaaaactcagaagaaaactacacatttgcagatattgtctttgga
aatgaacagataataagttcagccagtccttgtgcagacttttttttccaaagcttatcc
tctgaatttaaaagaacacatgtgcaatctcatgcatctcaaagggcagtgaaagaatcg
tttgatgaaacagtcagattgatacaaagatgcagtgaagttgatatgaacattgtggta
ctgtggaaggcatatgttgtggaagacagcaagcagcttattttggagggccagcatcat
gttgcccttaacacagttgggaaggaggccttttcatttcctcagaagcagggtttaaaa
aaaatactcgggaattctgattgggaggacttggaacaggaactaccagaaacagttctc
ttaaagttttttcgaccagaaaatacactggtacctgcaagaccaacaccagagcagctt
tctaatcttattaagacaagtcttcattatccagagtcttttaatcattcttttcatcaa
aaaagcctctgtctggtacctgtcactctcctactttccaattgttcccaggctgttgta
gatgtgatgattgatttgcggcataaaccaacaagctctgaagcactagaaatacatgga
tcttttacatggcttgggcaaacacagtacaagcttcaacttaaaggccaggaggtctat
agcttgcagctcaaagcttgcttcgttcatacaggtgtctataaccttggaacccccaga
gtatttgccaagcttgtggaccaagttactttgtttgaaacaagtcagcagaactccatg
cctgcactgattattatcaataatatctga
DBGET
integrated database retrieval system
