Anomalospiza imberbis (cuckoo-finch): 137473922
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Entry
137473922 CDS
T11605
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137473922 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aib03000
]
137473922 (ARID2)
03021 Transcription machinery [BR:
aib03021
]
137473922 (ARID2)
03036 Chromosome and associated proteins [BR:
aib03036
]
137473922 (ARID2)
Transcription factors [BR:
aib03000
]
Eukaryotic type
Helix-turn-helix
ARID
137473922 (ARID2)
Transcription machinery [BR:
aib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137473922 (ARID2)
Chromosome and associated proteins [BR:
aib03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
137473922 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
DUF5532
Motif
Other DBs
NCBI-GeneID:
137473922
NCBI-ProteinID:
XP_068046149
LinkDB
All DBs
Position
5:29724284..29816792
Genome browser
AA seq
1825 aa
AA seq
DB search
MANSTGKNHADQRRKGLAFLDELRQFHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGF
GKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEEDDEVQPGNPKP
QLPIGAIPTSYNYQQHIVSDYLRQSYGLSMDLNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSAVFGEEWKEKTDRDFVKFWKDI
VEDIEVRDLISDRSKSQDIPSEEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILANLCKAEDNGVLICEYVDQESYKEIICHLTLPDVLLVISALE
VLYMLTEMGEVACSKIAKVEKSIDTLVCLVSMDIQMFGPDALTAVKLIEHQCVSQQGILD
VRPQVMDHGSSQAHATGVPASRTAPHVAPPPGIVEIDSEKFACQWLNAHFEVNLDCSVSR
AEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDPSNNGQAHIHVVGVKRR
AIPLPIQMYYQQPPTSSTPVVRVDSLPDVSSSPLPAGIPHGLPSVGNHYQRTPINQSSTL
TATQMSFPIQGVHTVAQTVSRIPQNPSIHTQQNAPMTVIQNKGPISCEVVKAAVIQSSVP
QSAVPVPIAVGGASNQNHSTTGQQPSVTVVSSQMLHHQPVIQQQSPLHAVVPGQIPSGTP
VTVIQQAVPQGHIFGRVQNLPACSSAVSQGQQLISTSSQPGQTSSQQSSVGNQQQDTVII
APQQYVTTSASNIVSATTVQNFQVAAGQVVTIAGVQNPPTSRVGFQNIAPKPLPSQQGPP
AVGQQPQQQPPPPSQQSVVIVSQPAQQGQTYAPAIHQIVLANPASIPAGQTVQLAGQPSI
TPSSSPSPGPVTNNQVPTVMSSSSTTPQSQGPPPTVSQMLSVKRQQQQQHSPASSQQQVQ
VQQSMQMQVQSQQANTGVGQPNSGESSLIKQLLLPKRGPSAPGGKLILPAPQIPPPNNAR
APSPQVVYQMANNQTPGFGVQGQSPAQQLLVGQQNVQLVPGAIPPQGAVQTVPISNLQIL
PGQLISNSPATIFQGTTGNQVTITVVPNTSFATATVSQGNATQIIAPAGISVSGAQTGVG
LQVQTLPATQAPSAGQSPCTAAPPFKGDKIICQKEEEAKEATGLHIHERKIEVMENPSCR
RGSANTSNGDAKENEMQVGSLLNGRKYSDSSLPPSNSGKTQNEANQCSQVSNGPSLEMGE
NGAPGKQNFEQMDTQEIKSDLKKPLVNGICDFDKGDCSHLSKNIPNHKTSNHVGNGEISS
VEQQGNLDATQQDTAKGDQGERISNGPVLTLSSSPVVSGTQEAAKLLTQQLSGTNTDLPN
GPLASSLNSDVPQQRPSVVVSPQSTASVIQGHQIIAVPHSGPRVSQSTLSSEVRSTNGTA
ECKTAKRPAEDNDRETVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAI
ESAVQQKQQHPTTYIQSMVTQSTPATSIPTAQVQGQQMNLQPPSYTAASQHAEQMKKPGQ
NFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKH
CSRDALLAGLKQDEHGQAGNQKPSNKQPAAGATASTPRAQKAIVNHPSAALMALRRGSRN
LVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENHLSVLAISNMEASST
LAKCLYELNFTVQSKEHEKDSEMLQ
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacgggtaaaaaccacgcagaccagcggagaaagggactcgctttcctg
gacgagctgcggcagtttcaccacagcagagggtctccttttaagaagatccccgtggtg
ggtgggaaggagctggatcttcacgctctctataccagagtcaccactttaggcggattt
gggaaggtatcagagaagaatcagtggggagaaattgtagaagagtttaactttcccaga
agttgttctaacgctgccttcgctttaaaacagtattacttgcgttatctagaaaagtat
gaaaaagtccatcattttggggaggaggatgatgaggtacaaccaggcaatccaaagcca
caacttcctattggtgcaattccaacttcctataactaccagcaacacatcgtgtcagat
tatcttcgtcaaagctatgggctgtctatggacttaaactcaccaaatgactataataag
ttggtgctttcactgttatctggactcccaaatgaagtggattttgcaattaatgtctgt
actcttctttcaaatgaaagcaaacatgttatgcagcttgaaaaggaccctaaaatcatc
actttactgcttgcaaatgctggggtgtttgatgacactttaggatcattttctgctgta
tttggagaagagtggaaggagaaaactgatagagattttgttaagttttggaaggatatt
gttgaggatattgaagttcgtgatctaatttctgacagaagcaaatctcaagatattcca
tcagaagaatggatttgggaatccttatttcatccacctcgcaaattgggcattaacgat
attgaagggcagcgggtacttcagatagcagtgattttacgaaatctttcttttgaagag
ggaaatgttaaacttctggcagctaatcgtacttgtcttcggttcctgctactctctgct
cacagtcactttatttctctacggcagttggggcttgacacactgggaaatattgcagca
gagcttcttttggatcctgttgatttcaaaactactcatctaatgttccacacagttaca
aaatgcctcatgtcaagggatagatttttaaaaatgagaggcatggaaatcttggcaaat
ctttgtaaggctgaagataatggtgtcttaatttgtgaatatgtggatcaagaatcctat
aaagagatcatatgtcatctcacactaccagatgtgctgcttgtaatctcagcacttgag
gtgctatacatgctcacagaaatgggagaagtggcctgctcaaagattgctaaagtagag
aagagcatagatacattagtatgtctggtttctatggacatccagatgtttggacctgat
gctcttactgctgtaaagctcattgaacatcagtgtgttagccagcaaggaatacttgat
gtcagaccacaggtaatggatcatggttcttcacaggcccatgcaacaggtgtcccagcc
tctaggacagcaccacatgttgctccacctccaggaatagtagaaatagacagcgagaaa
tttgcatgtcaatggttgaatgcccattttgaagtgaaccttgattgctcagtctctcga
gcagaaatgtactctgaatacctctctacttgtagtaaattagctcgaggtggaatccta
acatcaactggattttataaatgcctgcgaactgtgtttccaaatcataccgtgaagaga
gtagaagatccaagtaacaatggtcaagcacatatacatgtggtaggagtgaagaggaga
gctataccacttcccattcagatgtactatcagcagccaccaacttcgtctaccccagtt
gtgcgggttgattcgcttcctgatgtgtcttcgtctcctttgccagcaggaatcccacat
gggctaccaagtgtaggaaatcactatcagaggacccctattaaccagtcttcaactttg
acagcaactcagatgtcttttccaattcaaggtgttcacactgtggcacagactgtttct
agaattccacaaaatccttctattcatacacaacaaaatgctccaatgactgttatacag
aataaaggtccaatatcctgtgaagtagtgaaggctgcagtaatacagagctctgttcct
cagtctgcagttcctgttcctattgcagtaggaggagcttctaatcaaaatcacagcacc
acaggccagcagccgtctgttacagttgtgagttctcagatgcttcaccaccaacctgta
attcaacaacagtccccactgcacgcagtggtaccaggacagataccttcaggcactcct
gttacggtaattcagcaagctgtacctcagggtcatatatttggcagagtacaaaaccta
ccagcatgcagttcagcagtttcacagggtcaacagctaatcagcacatcatcacagccc
gggcagacatcatctcagcagtcctctgtgggtaaccagcaacaagatacagtcatcata
gcaccacagcagtatgtcacaacctctgcatctaacattgtttctgctaccacagttcaa
aatttccaagtagcagctgggcaggtggttacaattgcaggtgttcagaacccaccaaca
tctagagtagggtttcagaatattgcaccaaagcctctgccatctcagcaaggtccacct
gctgtggggcagcagccacagcagcagcctccaccaccatcccagcaaagtgtagtgata
gtaagccagccagctcagcaaggtcagacatatgcaccagccattcatcaaattgtgctt
gctaacccagcttctattcctgctggccaaactgtccagttggctggacagccaagcatt
actccatcatcttcaccgtcccctggtccagttacaaataatcaagtccctacagttatg
tcatcttcatctaccactcctcagtcacaaggaccccctcctactgttagccagatgctt
tctgtaaagaggcagcagcagcagcagcattcaccagcatcatcgcagcagcaggtacag
gtacaacaatcgatgcaaatgcaagttcagtcacaacaagctaatacgggagttggccag
cccaactctggtgagtctagcctgataaaacaactgcttcttccaaaaagaggcccctca
gctccaggggggaagcttatactcccagctccacagattcctccacctaacaatgcaaga
gctcctagccctcaggtggtttatcagatggccaataaccagacaccaggttttggagtt
caaggacagtctccagctcagcagctgctagttggacagcaaaatgttcagctggtcccg
ggtgcaatcccaccccaaggggcagtgcaaacagtacccatttctaatttacagatattg
ccaggccagttgatctcaaacagcccagcaactattttccaagggactactggcaaccag
gttacgataacagttgtgccaaatacgagttttgctactgcaactgtgagtcagggaaat
gcaactcagataattgctccagcaggaatttcagtgagtggagcacagacaggagttggg
ctacaggtgcaaacccttccagctactcaagcaccttcagctggacaatcaccgtgtact
gctgctcccccattcaaaggtgataaaataatttgccaaaaggaggaagaagcaaaggaa
gcaacaggtttacacattcatgaacgtaaaattgaagttatggagaatccttcctgccga
agaggatctgcaaacaccagcaatggggatgcaaaagaaaatgaaatgcaggtgggaagt
cttttaaatgggagaaagtatagtgactccagtctacctccttctaactcagggaaaaca
cagaatgaggccaatcagtgctcacaagtcagtaatgggccatcattagaaatgggtgag
aacggagctcctggaaagcagaactttgaacaaatggacacacaggaaataaaaagtgat
ttgaagaagcccctagttaatggaatctgtgattttgataaaggagattgttctcatttg
agcaaaaacattccaaatcacaaaacttccaatcatgtaggaaatggtgagatatcttca
gtggaacaacaagggaatttggatgccacgcagcaagatactgccaaaggtgatcaaggg
gaaagaatttctaatgggcctgtattaactttgagtagttcacctgttgtaagcggtaca
caggaggctgcaaaactgttaacccagcaacttagtggtaccaacactgatttacctaat
ggacctctagcttcaagtttgaattcagatgtgcctcagcaacgcccaagtgtagttgtc
tcaccacaatctacagcctctgttatacaggggcatcaaatcatagcagttccacactca
ggacctagagtgtcccagtctaccctgtcctccgaagttcggtctactaatggcacagca
gaatgcaaaactgcaaagaggccagcagaggataatgacagggaaactgttccaggaatt
ccaaataaagtaggagttagaattgttacaatcagtgaccccaacaatgctggttgcagt
gcaactatggttgctgtgccagctggagcggatccaagcactgtagcgaaagtagcaata
gaaagtgctgttcaacaaaagcagcagcatccaaccacgtatatacaaagcatggtcaca
cagagcacacctgcaacgtcaataccaacagctcaagtacagggccagcagatgaatttg
cagccaccttcatacactgcagcaagtcaacatgcagagcaaatgaaaaaacctggacag
aacttcatgtgtctgtggcaatcttgtaaaaagtggtttcagacaccatcacaggttttc
tatcatgcagcaactgaacatggaggaaaagatgtctaccccgggcagtgcttatgggag
ggatgtgaacctttccagcggcagaggttttccttcattacccatttacaggataagcac
tgttccagagatgctttgcttgcaggattaaagcaagatgaacatggacaagcaggaaat
cagaagccttccaataagcagccagctgcaggggctactgcttctactcccagagcacag
aaggccattgtgaatcatccaagtgctgccctaatggcattaaggagaggatcaagaaac
cttgtcttcagagatttcacagatgaaaaagagggaccaataactaaacacatccgatta
acagctgccttaatattaaaaaatattggtaaatattcagaatgtggtcgcaggttgcta
aaaagacatgaaaatcatctatcagtgctagccattagtaatatggaagcttcctccaca
cttgccaaatgcctttatgaacttaattttactgtccagagtaaagaacatgaaaaagac
tctgagatgctgcagtga
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integrated database retrieval system
