Anomalospiza imberbis (cuckoo-finch): 137473928
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Entry
137473928 CDS
T11605
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04510
Focal adhesion
aib04512
ECM-receptor interaction
aib04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137473928 (LAMB1)
04518 Integrin signaling
137473928 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137473928 (LAMB1)
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Ortholog
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GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
DUF883
Motif
Other DBs
NCBI-GeneID:
137473928
NCBI-ProteinID:
XP_068046158
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All DBs
Position
5:complement(14164615..>14207019)
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AA seq
1992 aa
AA seq
DB search
PPIRHPLRIIAPCPEPVPDAGKSTAGGPRGWSPRSPARGSLATAGRDLPLPPTPTLLLFL
DGCAACPRKGPGCPRAGGRAGGARPSPADAEGRRRRRGRRRRPGGTRRRGAAVGTGGACV
ERPEPRLSAARGGAAASRPVVSCPIPSCPVPSCRLPWGASRCTSAAASVIPAPLRPPSGH
GGLGAPLQSPPGRLGAPSPAALPRPSLTLCPPLSLRGRAALWPAAAQEPEYSYGCAEGSC
YPATGDLLIGRAARLSASSTCGLRQPEPYCIVSHLQEDKKCFICDSEDPFHDTLNPDSHR
IENVVTTFAPNRLKLWWQSENGLENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSD
FGQTWHVYRYFAYDCESSFPGISTGPMKKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFR
IEDPYSPRIQNLLKITNLRVKFVKLHTLGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYG
HASECAPVEGLDEEVEGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKC
NCNGHSSQCHFDMAVYMTTGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPERDLRDPDVC
EPCNCDPAGSQNGGICDRYTDFSTGLIAGQCRCKLFVEGERCDLCKEGFYGLSADDPVGC
QSCACNPLGTHPGGNPCDSETGNCYCKRLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQG
GALSNNCSSESGQCECRPHMFGRQCNQVEPGYYFISLDHYIYEAEEANLGPGVNIIERQS
TPDRTPSWTGIGFVRVPEGAYLEFHIDNIPYSMEYDVLIRYEPQLPDQWEKAVISVSRPG
KIPTGSRCGNTVPDDDNQVVSLSPGSRYVVLPRPVCFEKGLNYTIRLELPQYSSVDTETE
NPYTLIDSLVLMPYCKSLDIFTVGGSGEDVVTNSAWETFQRYRCLENSRSVVKTPMTDVC
KNIIFSISALLHETALSCQCDPQGSLSSVCDPNGGQCQCRPNVVGRQCDRCAPGTFGFGP
SGCRPCECHVRGSYNAFCDVETGQCHCFPGVYGRQCDRCLPSFWGFPSCQPCHCNGHADD
CNPYTGECLSCRDHTAGHNCERCQAGYYGDPILGSGDHCRPCPCPDGPESGRQFASGCYQ
DPVTLQVVCVCSVGYIGSRCDECASGFFGSPDEVGGACQPCQCNNNIDTTDPEACDKRTG
ACVKCLYHTEGENCHLCREGYYGSALQQDCRKCVCNYLGTVREDCEGSESCRCEAATGQC
RCLPNVVGQTCDRCAPHTWRLASGTGCERCDCDPARSLGPACNEFTGQCHCMPGFGGRTC
RECQELFWGDPGVECLACDCNPRGIQTPQCDRATGQCICNEGVEGLHCDKCSRGYSGFFP
DCVPCHQCFALWDVIISELANRTQQFLDRANTLKITGVTGPYQQTLNTLEEKLTEIKTII
AQNPAAEPLKNIGNLFEEAEKLTADVTVKIADIEENLSALSAKSNSTDTDLSALETDAKS
LDHVVKELAEQLEFIKISDVRGALDSITKYFQMSLEAEERVNASTVHPDSAVELSAQTRQ
EVEDLINEKEAQFKAKQEEQSRLLDELAGKLQSLDLSEVAEKTCGTAPGASCAESECGGL
SCRTDEGKKKCGGPGCDGLVTVAHNAWQKAMDFDRDILSALAEVEQLSRMVSEAKQRADE
AKQNAQAVLLKTNATKEQVDRSNEDLRNLIKQIRDFLMQDSADLDSIEAVANEVLNMEMP
STPQQLQALTEDIRERVESLSDVEVILQQSAGDIARAEMLLEEAKRASKGATDVKVTADM
VKAALEEAEKAQNAAEKAIKQADEDIKGTQDLLTSIESENAASAETLNNATLRLFELEKS
VEDLRQKATTNSGNVGNIEDKIISAKQNAEEVKKVLNNELSGKYRTVEELIAKKTEESAE
ARRKAGVLQDEAKALLAQANSKLQLLKDLENTYENNQKVLEDKAKQLVELEETVRSLLQT
ISQKVAVYSTCL
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
ccacccatccgccacccccttcggattatcgcaccctgcccagagcccgttcccgacgct
ggaaagagcacagccggcgggccgaggggttggagtccccggtcccccgctcggggctcc
ctggctacagcgggacgggacctccccttgcctcccaccccgactctgctgctcttcctc
gacggctgcgctgcctgcccccgcaaagggccgggctgccccagggcggggggccgggcg
ggaggggctcggcccagccccgcggatgcggaggggcggaggaggaggagggggaggagg
aggaggccggggggcacccggcggcgcggggccgcagtcgggaccggcggcgcctgcgtg
gagcggccggagccgcggctttcggcggcgcgtggaggggcagccgcgtcccgtcccgtc
gtgtcctgtcccatcccatcctgtcccgtcccgtcctgccgcctgccatggggcgcctcc
cgctgtacctctgctgctgcctcggtaattcccgctccgctccggccgccgtcggggcac
ggcgggctgggcgcgcctctgcagagcccgccggggcggctcggggcgcccagcccggcc
gcgctcccgcgtccctctctcaccctctgtccccctctctccctccgcggccgcgcagcg
ctgtggcccgcggcggcacaggagcccgagtacagctatggctgcgccgagggcagctgc
taccccgccaccggcgacctgctcatcggccgcgccgcccgcctctccgcctcctccacc
tgcggcctccgccagcccgagccctactgcatcgtcagccacctccaggaggacaaaaaa
tgtttcatatgtgattcggaggatcctttccacgatactctcaatcccgacagtcatcgc
attgaaaatgtcgtcaccacgttcgctccaaatcgcctgaagctctggtggcagtcggaa
aatggtttggaaaatgtgactatccagctggacctggaggctgagtttcatttcactcat
ctcattatgaccttcaagacattccgtcctgctgcaatgttgattgaaagatcatctgac
tttgggcagacttggcacgtttacaggtattttgcttatgactgtgagagctcatttcct
gggatttcaactggacccatgaagaaagtggatgatataatctgtgattcccgatactct
gacattgaaccttcaacagagggagaggtaatatatcgtgttctagatcctgcttttcga
attgaagatccatacagtccaaggattcagaacctattaaagatcacaaatctgagagtc
aaattcgtcaagctgcacacgctgggagataacctcttggactccaggatggagatccga
gagaagtactactatgccatctacgacatggtggttcgtgggaactgtttctgctacgga
cacgccagtgagtgtgcgccggtggagggcttggatgaggaagtggaaggaatggttcat
ggtcactgcatgtgcagacataataccaaaggattaaactgtgagcagtgtttggatttc
taccatgacttaccctggcgccccgctgaaggtcgcaatagtaacgcatgcaaaaagtgc
aactgcaatggccactccagccagtgccactttgacatggctgtgtacatgacgacgggg
aacaccagtgggggagtgtgcgacgactgccagcacaacactgtgggacgcaactgcgag
cagtgcaagcccttctacttccagcacccggagagagacctgcgggaccccgacgtctgt
gagccttgcaactgtgacccagctggctcccagaatggtgggatctgcgaccgctacact
gatttctccaccggcctcattgccggacagtgccgttgtaaattatttgtcgagggggag
cgttgtgacctctgcaaagaaggtttctatggcctgagtgccgatgacccagtgggctgt
cagtcttgtgcgtgtaatcctctgggtacccaccccggggggaatccttgtgattcggag
acaggaaactgctattgtaagcgtctggtgacaggaaagcagtgcaatcaatgtctgccc
gagcactggggcctgagcaatgacatggatggatgtcggccgtgcgactgcgaccaggga
ggagcgctgagcaacaactgctcaagcgaatctggccaatgtgaatgccggccccacatg
tttggacgtcagtgcaaccaggtggagcctggctattacttcatttcacttgatcattac
atctacgaggcggaggaagccaacttgggtcctggagtgaacataatagagcgccagtcc
acgccagaccgcacaccgtcatggacaggcataggatttgtgagagtccctgagggggca
tacctggaattccacattgacaacatcccctactccatggagtatgatgttctgatccgc
tacgagccgcagttgcctgatcagtgggaaaaagctgtgatcagtgtctcacggccaggc
aagattcctacaggtagcaggtgtggcaacacagttcctgatgatgataatcaagtggtc
tcactgtcacctggatccagatacgttgttctcccgcggcccgtgtgcttcgagaagggg
ctgaattacaccatccgcctggagctgccccagtactcctcggtggatacggagactgag
aacccatacacactcattgactctcttgttctcatgccatactgcaaatcgctggacata
ttcacagtgggaggctcgggcgaagacgtggtcacgaacagtgcttgggaaactttccaa
agataccggtgtttggaaaacagcaggagtgttgtgaaaactcccatgacagatgtgtgc
aagaacataatattcagcatttctgcactgttgcacgagactgcattatcatgccagtgt
gacccgcagggctccctgagttcagtgtgtgaccccaatggaggacagtgccagtgtcgt
cccaacgttgttggaagacagtgcgacagatgtgcccctggcacctttgggtttgggcca
agtggatgccgaccgtgcgagtgccacgtccgaggctcttacaacgccttctgcgacgtg
gagacgggccagtgccactgcttccctggggtgtacgggcggcagtgcgaccgctgcctg
cccagcttctggggcttccccagctgccagccctgccactgcaatggccacgctgacgac
tgcaacccctacactggggagtgcctgagctgccgggaccacacagccggacacaactgt
gagaggtgccaggctggctactatggagaccccatcctgggatcaggtgaccactgccgc
ccctgcccttgccctgacggccccgagagcggacgccagtttgccagtggctgttaccag
gatccagtcacactgcaagtcgtctgtgtctgtagcgtgggatacataggcagtcgatgt
gatgaatgtgcgtctggcttctttgggagccccgatgaggttggcggcgcctgccagccg
tgccagtgcaacaacaacatcgacaccactgacccagaggcctgcgacaagaggaccgga
gcgtgcgtgaagtgcctgtatcacaccgagggtgaaaactgccacctctgcagagagggc
tactacgggagtgccctgcagcaggactgcagaaagtgcgtctgcaactacctgggcact
gtccgggaggactgcgagggctcggagagctgccgctgcgaggcggccacggggcagtgc
cggtgcctcccgaacgtggtggggcagacctgtgaccgctgtgccccccacacgtggcgg
ctggccagcggcaccggctgcgagcggtgcgactgcgaccccgcgcgctccctcggccct
gcctgcaacgagttcacaggccagtgccactgcatgccaggtttcggaggccggacctgc
cgggagtgccaggagctcttctggggtgacccaggcgtggagtgcttagcatgtgactgc
aaccctcgtggcatccagaccccacagtgtgaccgtgccactgggcagtgcatctgcaat
gaaggggtggaagggctgcactgtgacaagtgctcccggggctactcaggcttcttcccc
gactgcgtgccgtgccaccagtgctttgccctctgggatgtgatcatcagcgagctggct
aataggacccagcagttcttggacagggctaacaccctcaaaatcactggagtcactggt
ccataccagcagacgctcaacacgctggaagagaagctcactgaaattaaaaccatcatc
gctcaaaatccagcagccgagcccctgaagaacattgggaatctcttcgaggaagcagaa
aagctgacagcagatgttacagttaagatagctgacatagaagaaaacctttcagcctta
tcagcaaagagcaatagcacagacacagacctgagtgcactggagacagatgccaaaagt
ctcgaccacgttgtgaaagaactcgcagagcagctagagttcatcaagatctctgatgtt
cggggagccttggatagtatcaccaagtatttccagatgtccctggaggcagaggagagg
gtcaacgcctccactgttcatcccgatagcgccgtggagctgtcagcgcaaacgcggcag
gaagtggaagacttaatcaatgagaaggaggcccagttcaaggctaaacaagaggagcag
tcgcgccttctggatgaacttgctggaaagctgcagagcctggatctctctgaggtggct
gagaagacgtgtggcactgctccgggagcctcctgtgccgagtccgagtgtggggggctg
agctgtcggacagacgaggggaagaagaagtgtggaggccccggctgcgacgggctggtg
actgtagctcacaatgcctggcagaaggctatggattttgacagagacatcctcagtgca
ttagcagaagttgagcaactctccagaatggtttctgaggcaaaacagagagcagatgaa
gcaaaacaaaatgcacaagcagttttgctgaaaaccaatgctacaaaagaacaagtggac
agaagcaatgaagatctgagaaatcttattaaacagattagagacttcctaatgcaagac
agcgctgacctggatagcattgaggcagtggctaatgaagtgctgaacatggagatgcca
agcactccccagcagctgcaggctctgacggaagatattcgtgagcgtgtagaaagcctt
tctgacgttgaggtcattctacagcagagtgctggagacattgccagagcagaaatgcta
ctggaggaagctaaaagagcgagcaaaggtgcaacagatgttaaagtcactgcagacatg
gtgaaagcagcactggaagaagctgaaaaagctcaaaatgcagctgaaaaagccatcaaa
caggctgatgaagatattaaaggaactcaagacctgctgacttcgattgaatctgaaaat
gcagcatctgcagaaacgctgaacaatgccaccttacgtctgtttgagctagagaagagt
gttgaagaccttaggcaaaaggctactacaaattcagggaatgtgggaaatatagaagac
aaaattattagtgcaaaacaaaatgctgaagaagttaaaaaggtcctcaacaacgagctg
agcggcaagtacagaaccgtggaagagctcattgccaagaagacagaggagtcggccgag
gccaggaggaaagctggcgtgttgcaagacgaagctaaagccttgttggctcaagcaaac
agcaaactccagctgctcaaagatttggaaaatacatatgaaaacaatcagaaagttctg
gaagacaaagccaagcagttggtggagctggaagagacagttcgctccctcttacagaca
atcagccagaaggttgctgtttatagcacttgcttataa
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