Anomalospiza imberbis (cuckoo-finch): 137474262
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Entry
137474262 CDS
T11605
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
137474262 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aib03000
]
137474262 (YBX3)
03041 Spliceosome [BR:
aib03041
]
137474262 (YBX3)
Transcription factors [BR:
aib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
137474262 (YBX3)
Spliceosome [BR:
aib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
137474262 (YBX3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
Bim_N
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
137474262
NCBI-ProteinID:
XP_068046774
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All DBs
Position
5:50207957..50225301
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AA seq
286 aa
AA seq
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MSEAPETSAASPAPAAPPVPAAAAASPAPAAPDAAPKSPASAAAPGAAVAEAAPGAAAAA
TTAAAESVKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV
GDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGPPRSQGGE
GEIKDGVTEGGQLQQVHRNPTYRPRYRRGPPRPRPAPATGEAENKENHHEANAMSQQPLR
RGYRRPYNYRRRPRPASAPAQEGKETKATETPAENPAPVTEQSGAE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgccggagaccagcgccgccagccccgcgcccgccgcgccgcccgtcccg
gccgcggctgctgcgtcgcccgcgcccgccgccccggacgccgctcccaagagccccgcc
agcgccgccgcgccgggtgcggctgttgctgaggcggcccccggcgccgccgccgcggcc
acaaccgcggcggccgagtcggtgaagaaagtgctggccaccaaagttcttggcactgtc
aagtggttcaatgtcagaaatggatatggctttatcaacagaaacgataccaaagaagat
gtgtttgttcatcagacagcgataaagaaaaacaatccacggaagtacctgcgcagcgtt
ggcgatggagagactgtagagtttgatgtggttgagggagaaaagggtgcagaagcagct
aatgtcactggtccagatggagtccccgtggaaggcagccgttacgctgcggaccggcgc
cgctatcgacgaggctactttggccgacgccggggcccacctcggagtcagggtggtgag
ggagaaatcaaggatggggtcacagaaggaggacaacttcagcaagtgcacaggaatcct
acctaccgtccccgctatcgcagagggccccctcgcccacgccctgccccggcaactgga
gaggctgaaaacaaggagaaccatcacgaggccaatgccatgagccagcagccgctgcgc
cgcggctaccggcgcccctacaactaccggcgccggccgcgcccagccagcgctccggca
caggagggcaaagagacaaaggcaactgaaacacctgctgaaaatcctgctccagtgaca
gagcagagtggcgctgagtaa
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