Anomalospiza imberbis (cuckoo-finch): 137475667 Help Entry 137475667         CDS       T11605                                  Symbol ACTN1 Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism aib  Anomalospiza imberbis (cuckoo-finch) Pathway aib04510   Focal adhesion aib04517   IgSF CAM signaling aib04518   Integrin signaling aib04519   Cadherin signaling aib04520   Adherens junction aib04530   Tight junction aib04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:aib00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     137475667 (ACTN1)    04518 Integrin signaling     137475667 (ACTN1)    04519 Cadherin signaling     137475667 (ACTN1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     137475667 (ACTN1)    04520 Adherens junction     137475667 (ACTN1)    04530 Tight junction     137475667 (ACTN1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     137475667 (ACTN1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:aib04131]     137475667 (ACTN1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:aib04812]     137475667 (ACTN1)    04147 Exosome [BR:aib04147]     137475667 (ACTN1) Membrane trafficking [BR:aib04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     137475667 (ACTN1) Cytoskeleton proteins [BR:aib04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      137475667 (ACTN1) Exosome [BR:aib04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    137475667 (ACTN1)   Exosomal proteins of colorectal cancer cells    137475667 (ACTN1)   Exosomal proteins of bladder cancer cells    137475667 (ACTN1) SSDB OrthologParalogGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 XisI FAZ1_C Uds1 U3_assoc_6 Motif Other DBs NCBI-GeneID:  137475667 NCBI-ProteinID:  XP_068049297 LinkDB All DBs Position 6:complement(33686618..33774003) Genome browser AA seq 892 aa AA seqDB search MDHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM VSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPHEI NGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY DIGNDAQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK NYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL NT seq 2679 nt NT seq  +upstreamnt  +downstreamnt atggatcactacgacccgcagcagaccaatgactacatgcagccggaggaggactgggac cgggacctgctcctcgacccagcttgggagaagcagcagaggaagacatttacagcatgg tgtaattctcacctccgcaaggctgggacgcagattgagaacatagaggaagatttcagg gatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtctggctaagcct gaaagaggcaaaatgcgcgtgcacaaaatatccaatgtgaacaaggccttggatttcatt gccagcaaaggagtcaagctcgtatccattggagcagaagaaatcgtggatggcaatgtt aaaatgacccttggaatgatctggaccatcatccttcgttttgccattcaggatatctca gttgaagaaacatctgctaaagaaggacttttgttatggtgtcagcggaagacagccccc tacaaaaatgtaaacatccagaacttccatatcagttggaaggatggccttggtttctgt gctttaattcatagacaccgtccagagctcatcgactacgggaagctacgaaaggacgat cctctcactaatctaaacacagcttttgatgtggctgagaaatatctggatattccgaag atgctggatgcagaagacattgttggaactgcccgtcctgacgagaaggccatcatgacc tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagcaaat cggatctgcaaggtgctggcagtcaaccaagaaaatgaacagctcatggaagactacgaa aaactggccagtgatctgctggagtggattcgccgcaccatcccctggctggagaaccgg gccccagagaacaccatgcaagccatgcagcagaagctggaggacttccgggactaccgc cgcctgcacaagccccccaaggtccaggagaagtgccaacttgagatcaatttcaacacc ttgcagaccaagctgcggctcagcaataggcctgccttcatgccctccgaagggaaaatg gtctcggatataaacaatgcctggggtggcctagagcaggctgagaagggctacgaggag tggttgttgaatgagatccggaggctagagaggctggatcacctggcagagaagttccgg cagaaggcatccattcatgagtcctggacagatggaaaggaagcaatgctgcagcagaag gattacgaaactgcaaccctctcggagataaaggccctgctgaagaaacacgaggccttt gagagtgacctggcagcacaccaggaccgcgtggagcagattgctgctattgcacaagag ctcaatgagctggactattacgactctcccagtgtcaatgccaggtgccagaagatctgt gatcagtgggataatctgggtgccctaacccagaaacgcagagaagccttggagaggaca gagaaactactggaaacaattgaccagttgtacctggagtatgccaaacgagctgcccct ttcaataactggatggaaggggccatggaagatctgcaggacacattcatcgttcatacc attgaggagatccagggattgaccacagctcatgagcagttcaaagccacgttgccagat gcggacaaggagcgacaagccatcttgggaatccacaatgaagtctcaaagattgtccag acatatcatgtcaacatggcaggaacgaatccttacactacaatcaccccacatgagatc aatggcaaatgggaacatgtgcggcagctggttcccagaagggatcaagccctgatggaa gaacacgctcgccagcagcaaaatgaacgacttcgtaaacagtttggtgcacaggccaat gtcattggaccctggatccagaccaagatggaggagattggccgcatttcaatagagatg cacgggaccctggaggaccagctcaaccacttgcggcagtacgagaaaagcattgtgaat tacaaaccaaagattgaccagctggaaggagaccaccagctgatccaggaagcccttatc tttgacaacaagcacaccaactacaccatggagcatatccgcgtgggctgggagcagtta ctaacaacaattgctagaaccatcaacgaagtggaaaaccagatcctgacccgtgatgcc aaaggaatcagccaggaacagatgaatgagttccgggcttctttcaaccactttgacagg gaccactccggcacacttggccctgaggaattcaaagcctgtctcatcagcttgggttac gatattggaaacgatgcacagggagaggcagagtttgcccgcatcatgagcatcgttgac ccgaaccgtttgggtgtagtgaccttccaggccttcatcgacttcatgtcccgggagacg gcagatacagatactgctgaccaggttatggcttccttcaagatcctggctggagataag aactacatcactgtggatgaattgcggcgggagctgcctcctgaccaggctgaatattgc attgctaggatggcaccatacaatggccgtgatgctgtacccggtgccctggactacatg tccttctccacagcgctctacggcgaaagtgacctttaa

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