Anomalospiza imberbis (cuckoo-finch): 137476423
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Entry
137476423 CDS
T11605
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aib03000
]
137476423 (BMAL1)
Transcription factors [BR:
aib03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137476423 (BMAL1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_IRO3
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
137476423
NCBI-ProteinID:
XP_068050773
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Position
6:58813823..58862732
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AA seq
633 aa
AA seq
DB search
MADQRMDISSTISDFMSPDPADLISSSLSTSGMDCNRKRKGSSTDYQLDGFPFEEGMDTD
KDDQHGRLEYADQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPANGEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIAHLAECHRQVLQTREKITTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTTVLDSGDAAFPQLAASPHSMDSVLQAGEGG
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS
SPGGKKILNGGTPDISSAGLLSGQIQDNSGYPYSDNSSILGENSHIGMDMIDTEQGSSSP
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaggatggacatatcttctacaattagtgactttatgtcaccagaccct
gctgacttgatctccagttcccttagcacttcaggaatggactgtaataggaaaaggaag
ggaagctcaactgattatcaactcgatggctttccttttgaggaaggtatggatacagat
aaagatgaccaacatggaagattggagtatgcagaccaacaaggcaggataaaaaatgca
agggaggctcacagtcagatcgagaagaggcgcagggataagatgaacagcttcatagac
gagctggcctcgctggtgcccacgtgcaacgccatgtcccgcaagctggacaagctcacc
gtgctcaggatggctgtccagcacatgaaaacacttcgtggtgctacaaacccatataca
gaagcaaactacaagcctgcttttctatcagatgatgaattaaaacatcttattctcagg
gcagcagatggattcctttttgttgtgggctgtgacagaggaaagatactgtttgtttca
gaatctgtcttcaagatcctcaattacagtcagaatgatttgattggtcaaagtttattt
gattatctccatcctaaagacattgccaaagtgaaggagcagctctcttcttctgacacc
gcgccacgagaaagacttatagatgcaaaaaccggactcccggtcaagacggacatcacg
cccgggccctcgcggctctgctccggagcacggcgctccttcttctgcaggatgaagtgc
aacaggccctccgtcaaggtagaagacaaggatttcccttcaacctgctcaaaaaagaaa
gcagaccgcaaaagcttttgcactattcatagcacaggctacttaaaaagctggcctcca
acaaagatgggcctggatgaagacaacgagccagataacgagggctgtaatttgagctgc
ctcgtggccatcgggaggctccatccccacgtggtcccgcagccggcgaacggcgagatc
cgggtgaagcccacggaatacgtgtcccggcacgccatcgacggcaagttcgtctttgta
gatcagagggcaacagctatcctggcatacttaccccaggaacttctaggtacttcgtgt
tatgaatattttcatcaagatgatatagcacatcttgcagaatgtcacagacaagttttg
cagacaagagaaaaaattacaactaattgctacaagtttaaaataaaagatggctctttt
attacgttgcggagtcgctggttcagtttcatgaacccttggaccaaagaagtagaatac
attgtctccacaaacacagtcgtttccaccacggtcctggacagcggggacgcggccttt
ccccagctggcagcgtccccacacagcatggacagcgtgctccaggctggagaaggtggc
cccaaaaggacccatcccactgtgcctggaattccaggtggaacaagagctggggcaggt
aaaatagggaggatgattgctgaagaaatcatggagattcacaggataagaggatcatca
ccttccagctgtggctcaagtcccctgaacatcaccagcacccccccgcccgacacatcc
tcgcctggagggaagaagatcttgaatggtggcactccagacatttcttcagctgggctg
ctgtctgggcaaatccaggataattctgggtacccttattccgacaactcctctatcctg
ggggagaactcccacatcggcatggacatgatcgacacggagcagggctccagcagcccc
agcaacgacgaggcggccatggcggtcatcatgagcctgctggaggccgacgcggggctc
ggcggccccgtggacttcagcgacctgccctggcccctgtga
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