Anomalospiza imberbis (cuckoo-finch): 137478245 Help Entry 137478245         CDS       T11605                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog   KO K14792   rRNA biogenesis protein RRP5 Organism aib  Anomalospiza imberbis (cuckoo-finch) Brite KEGG Orthology (KO) [BR:aib00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:aib03009]     137478245 (PDCD11) Ribosome biogenesis [BR:aib03009]  Eukaryotic type   90S particles    Other 90S particles     137478245 (PDCD11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 OB_PDCD11 HAT_Syf1_CNRKL1_N OB_RRP5_4th HAT_PRP39_N Suf Spt6_S1 HAT_PRP39_C OB_RRP5 HAT_Syf1_CNRKL1_C TPR_14 TPR_19 DUF8501 PRP6_TPR CFAP70_mid_TPR CFAP70_TPR_C TPR_15 TPR_YpiA_C ARM_TT21_5th TPR_CcmH_CycH ARM_TT21 TPR_12 Motif Other DBs NCBI-GeneID:  137478245 NCBI-ProteinID:  XP_068054052 LinkDB All DBs Position 8:23281597..23305298 Genome browser AA seq 1834 aa AA seqDB search MASMEENFPRGGVQKKPAEGKTPKPKSERDNLFDVQHEEKSQKRKRSQNDQEKQKRFKAD KTVKVAVKDNVVNIGPLTIEALSEGMLLLGCIKEISDYELAISLPNGLSGFVPVTQISDA YSKLLTKQVAQGEVPEELNSLPDMFSPGTLVRCIVTSIEKSDNGRRSVKLSIDPKKVNKG LNSTALAAGMLLSGSVLSVEDHGYLIDIGVTGTHAFLPHQKAKNYIKAVKKGPDLKIGQN LNCLIVEVKSEGRVVCLSIDRSEVAASIATEQQNWALSNLLPGLVVKARVQKVDPLGMKL TFLSYFTGIVDFMHIDPEKSMSYSPDQVVRACVLSVHPTSRAVRLTLRPPFLHAGGAPRQ LPGQRMGAVLEEATVKAFYKQFGAIFELDDGTLAFARLKHLSKTRKSFKPGAFKEGCKHK CRIIDYSLMDEMCIVSLKHQIIEARFLQYQDIHTGDVVQGKVVSLKPIGMQVKVADGIRG LVPSLHLSDVILKQPEKKYNIGDEVKCRVLECNPGGKKLILTLKKSLIQSKLPVLSNYED AKPGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELGSEPVSCPDKVFYEGQVLKVMVLK CEPQQERLLLSFRLSSKPGPEDKWKCTPKEKQEVKYQIGEIVDVKILKKKGNGLEVSILE DEDNVVAWIPMLHLSDFVATSKLLWHCLQEGDVLPRVMYLSDKGEHIILSRKSAVISAVQ EEQVVRSFSEIQPGMQLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVV GQTVIAKVMSIDEEKQRVLLNLKVSECSSGDSAAESFALLNQYFKEMKEIRDLLRRGEPS ICELVPGKRVHLVVQDVREDGSALFSGSSVTGLTVTATRYHLGDKNIAPGEKRKAFVLHV DALTSEVYVSLREELLKQRPKRRLRENSQHSAVVQHITEHFAIVSLLETGQLAAVPIACH FNDTFRFDSEKLRVGQKISATLKAVKENNHGVLLAVQGPAKKNVFVRVRNESETALEEML PAVKHSLSPGDVVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTSTLKAGQ KVTARVIGGRDVNTHRCLPITHPHFTQSIPELSIRPSEKEGEFTAMLNLKEESSLKQLGL YNVGQTVTCFVKKYNMLKNWLEVEVAPDIRGRVPHLLLSLNTKVLKHPEKSFKNGQAISA TVTGTGATETNLCLSLTGIQSLEQDTISVGMVTKVTPHVGLTIALPGGKTGKVSIFHLSD TYTDNPLENFKVGKIVRCYILSNENGKIQLSLRQSRLNPKINSKVEDIEITSIKDVKKGQ LVRGYVKSITPSGVFFGLSTSLLGRILFQNVSPYFVHKHSLYEKYLPEGKLLTAKVLGVN RKEKRIDLSLLPEDTGMPSVLPESLGLPQYGAEEEIKEADDEEKREEPKLKTKRRRGNYE SGQEAKPKKRKICPGDENDSGIEVYYREEEEDDQEEEAAKKKSTVRKPGEAPRLQVSMGF TWEEDNAVDIPVLDQKEESSESEEEEDIQSKLKKRTKKEKELEKQKKEKELCKVEAALMD PSRQPQSADDFDRLVLGSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEK LNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYASSEKNKQAEELYHTM LKRFRQEKSVWLKYASFLLKQGQAEATHRLLERALKALPTKEHVDVISRFAQLEFHSGDT EHAKALFESTLSSYPKRTDIWSIYMDIMIKHGSQKEVRDIFERVIHLSLAPKKMKFFFKR YLDYEKKFGTAESVLAVKRAALEYVETKSSLADT NT seq 5505 nt NT seq  +upstreamnt  +downstreamnt atggcatccatggaagaaaactttcctcgtgggggcgtccagaagaaacctgcagaggga aaaacacccaagccaaagtcagagcgggacaatttgtttgatgttcaacatgaagaaaaa tcccagaaaagaaaaaggagccagaacgatcaagaaaagcagaaaaggttcaaggcagac aaaactgttaaagttgctgttaaagacaatgttgtgaatattggaccactcacaattgag gcgctcagtgaggggatgctgctccttggctgtataaaagagatcagtgactacgagctc gccatcagtttgcccaacggcctctctggatttgtgccggtcacgcagatcagcgatgcc tacagcaaactgctgaccaagcaggtggcccaaggagaagtcccggaggagctgaattct ctcccagacatgttttctccagggacactggtcaggtgcattgtgaccagcattgagaag agtgacaatggacgtcgcagcgtcaagttatcgattgaccccaagaaagtcaacaagggc ctgaactctacagcgctagcagcaggcatgctgctctctggctctgtgttgagtgtggaa gaccatggctacctcatagatattggtgtcactggaactcatgctttcctgcctcatcag aaagccaaaaattacatcaaagcagtcaagaaagggcctgacttgaaaataggccagaac ctgaactgcctcattgtggaagtgaagagtgagggcagggtggtctgtttgtccattgat cggtcagaggtggctgcatccattgccacagagcaacagaactgggcactctctaattta ttgccagggctggtggtgaaagctcgagtgcagaaggtggatccacttgggatgaaactg acatttctgtcttacttcactggcattgtggatttcatgcacatagacccagagaaatcc atgagctattcaccagatcaagtggtgagggcctgtgtgctgtctgtacaccccacgtcg agggcggtgcggctcacgctgcgcccgcccttcctgcacgccgggggagccccgcgccag ctccccggccagcgcatgggggcagtgctggaggaggccacggtgaaagccttctacaag cagtttggagccatctttgagcttgatgatggcactcttgcatttgcacggttgaagcat ctttcaaaaaccagaaaatcctttaaacctggggcatttaaggaaggttgcaaacataaa tgtcgcatcattgactacagcttgatggatgagatgtgtattgtatctctgaagcaccag attattgaagcacgatttctgcaataccaggatatccacacaggtgatgtggtgcagggc aaagtggtctctctaaaacccattgggatgcaggtgaaagtagctgatgggattagagga cttgtgccatccctccatctctctgatgtgatcctgaagcagcctgagaagaaatacaac ataggagatgaagtcaagtgtcgggtgctagagtgcaatcctggaggaaagaagctaatc cttactttaaagaaaagtctcatccagtcaaagcttccagtcctctcaaattatgaagat gcaaaaccaggcctgatcacacatggctttgtagtgtgtgcacgggagtttggctgcatt gtgaagttctacaatgatgtcaaaggtctggtacccaagaatgagctgggctcagaacct gtatcttgtccagataaagtcttctatgaaggccaggttcttaaagtaatggtcttaaaa tgtgagcctcagcaggaaagactcttgttgtccttcagattatcaagcaaacctggccct gaggacaaatggaaatgtactccaaaggagaaacaggaagtgaaataccaaataggagag attgttgatgtgaaaatcttgaagaagaaaggtaatgggttagaagtttccatcttagaa gatgaagacaatgtggtagcctggatccccatgctgcacctctctgactttgttgctacc tccaagctcctatggcactgtcttcaagagggagatgtcctgcctagagttatgtatcta agtgacaagggagagcacattatcttgagtagaaagtctgcagtgatttctgctgtacag gaggagcaagttgtaagaagcttctctgaaatacagcctgggatgcagttgactggttat gtgaggaatgtgatgccctttggagtgtttgtggagttcccttttggtgttaccggactg gcacctaaagtgagcatgagtgacaagtttgtgacagacaccaaggaccactttgtggtg ggacagactgtgattgcaaaggtgatgagcattgatgaggagaagcagcgtgtgctcctc aatctgaaggtgtctgagtgcagctcaggagattctgctgcagagagctttgccctcctg aatcaatatttcaaggagatgaaagaaatcagggacttgttgagaagaggagagcccagc atttgtgagttggtgcctggaaagagggtgcatctggttgtgcaggatgtgagggaggat ggctcagcactgttcagtggcagctctgtcacaggcttgactgtaactgccacccgctac catttgggagacaaaaatattgctcctggtgagaaaaggaaggcatttgttcttcatgtg gatgccctcacatctgaagtgtatgtttctcttcgggaagaattgttaaagcaaagaccc aagcgacggctccgagagaactcccagcactctgcggtggtgcagcacatcacagagcac tttgccatcgtgtctctgctggaaacaggccagctggcagctgtccccatcgcctgccac ttcaacgacaccttccgcttcgactcggaaaaactgagggtgggacaaaaaatctctgcc accttaaaagcagtgaaggagaacaaccatggagtcttgttagcagtacagggcccagcc aagaagaacgtttttgtaagggtgcggaacgagtcagagacagcattagaggagatgctt cctgctgtgaaacactcgctgtccccaggggatgttgttactggtaccgttaaatccgtc aaaccaacccacgtcactgttgctattgatgacaagctgacaggttcaatccacgcatcc cggattctggatgaagtgcccataggctcctttccaacttctactctgaaagccggacag aaagtgactgctcgagtcattggaggcagagatgtgaatactcacaggtgcctgccaatc acccatccacacttcacacaatccattccagagctcagcattcgaccaagtgaaaaagaa ggggaattcacagcaatgctgaaccttaaagaagaaagttccctcaagcaacttggactc tacaatgttggacagacagtcacctgttttgtaaagaagtataacatgctcaaaaactgg ctggaggtagaagtcgcccctgacattcgaggaagagttcctcacctgctgctgtctctg aacaccaaggtcttaaaacatccagaaaagagttttaaaaatggccaggcaatatcagct acagtgactggaacaggtgccaccgaaacaaacctctgcttgtcactcacaggaattcag tcactggagcaggacaccatctctgtaggcatggtaacaaaggtgactccacacgttggc ttgaccattgcgctgccaggtgggaagactggcaaagtgagcatctttcacctgagtgat acttacacagataatcctctggagaacttcaaagttggcaagattgtcaggtgctacatc ctctccaatgagaacggtaaaatccaattatctctccggcaatctcggctaaatccaaag ataaacagcaaagtggaggatattgaaataacgagtattaaggatgttaaaaaaggccag ctagtgagaggctatgtcaaatcaatcactccatcaggtgtattctttggattgtccact tctctcctgggccgaatcctgttccagaatgtttctccatactttgtacacaagcattcc ttatatgaaaagtacctgcctgaaggaaaactgctcactgccaaagtacttggggtaaat agaaaagaaaaacgtattgacctctctctcctacctgaggacactgggatgccaagtgtc ttgcctgaatccctaggcctaccacaatatggagcagaagaagagataaaagaggcagat gatgaggaaaaaagagaagagcctaagctgaagacaaaaaggagaagaggaaattatgaa agtggtcaggaggcaaagccaaagaagaggaagatctgcccaggagatgaaaatgacagt ggaattgaggtgtattaccgtgaggaggaagaggatgatcaggaggaagaggctgctaaa aagaaatctacggtaaggaagcctggtgaagctcccaggctgcaagtttccatgggcttc acctgggaagaagacaatgcagtggatatacctgtgctggatcagaaggaagagagctca gagagcgaggaggaggaggatatacagtccaagctaaagaaacgaacaaagaaggagaag gagctggagaagcagaagaaggagaaggaactttgcaaagtagaggcggctctaatggac ccgagtcggcagccccagtcagcagatgacttcgaccgcctggtgctgggcagtcccaac agctccatcctctggctgcagtacatggctttccacctccaggctacagagattgagaag gccagagctgtggcagagagagcgcttaaaacaatcagtttcagggaagaacaggagaag ctgaatgtctgggtagctctgctgaacttggagaacatgtatggtactgaggagacactg atgaaggtctttgagagagcagttcaatacaatgaacccctgaaagtcttccagcatcta tgtgacatctatgccagttctgagaagaacaagcaagcagaagaattgtaccacacaatg ctgaagcgttttcgtcaggagaaatccgtgtggctgaaatatgcctctttcctcctgaag caaggccaagctgaggctacacaccggcttctggagcgggctctcaaggctctgcccacc aaagaacatgtagatgtcatttcaaggtttgcacagctggagttccattctggggacaca gaacatgccaaggccctctttgagagcaccctcagcagttatcccaagcggacggacatt tggtccatctacatggacatcatgatcaagcatggcagccagaaggaagtacgagacatc tttgagagggtcatacacctgagcttggcaccaaagaagatgaaattcttcttcaaacgc tacctggattatgagaagaaatttgggacagctgaaagtgtcctggctgttaaaagagca gcacttgagtatgtggagaccaagagttcccttgccgacacctaa

DBGET integrated database retrieval system