KEGG   Anomalospiza imberbis (cuckoo-finch): 137478618
Entry
137478618         CDS       T11605                                 
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
  KO
K11101  patched 2
Organism
aib  Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:aib00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    137478618 (PTCH2)
SSDB
Motif
Pfam: Sterol-sensing TRA2_N Patched MMPL
Other DBs
NCBI-GeneID: 137478618
NCBI-ProteinID: XP_068054689
LinkDB
Position
9:complement(21763376..21784913)
AA seq 1365 aa
MPAEPPRAAPPPLRAARRKPLPEGRAVGQTTPLWLRARFQALLFALGCRIQRHCGKVLFV
GLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKK
DGDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLF
PCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLNPLQLMEELGQFTSLEGFKELLDKA
EVGQAYMERPCLDPRDPQCPSSAPNKQSQQSPDIPAELSGGCHGFSRKFMRWQQELILGG
TTKDSQGKLLRRSQRGACLSPSAEALQTMFLLMSPRQLYEHFKDDYEIHDISWSEEKAGA
ILEAWQRKFVELAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLLMLAYAC
VTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIGVDD
MFLLAHAFTETSHHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPALRAFSLQ
AAVVVVFNFAMVLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQELADANDN
HACHPSPYGHPGMATSTQITTTVQAFTRCDPSGHHIVTVLPPTSQVCTSPAIVLPHSDPL
GSQVFAPSSSTRDLLSQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRTKVVVAV
LFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKGGFHYPG
AQAALLSLHQAFSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRITHDSYR
NGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWASNDPLGF
AASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVEAIESVR
AICQEAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLLLNPWTAG
IIVSILAMIAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAAGSRNVR
SAAALEHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGLVLLPVL
LSVIGPPPEASLVDNGPCLPPPESIPPCLGPGGLYVRRTPAWPSTFPEPSDTEHYTESMG
PGSPRGPFVVPPAPAHILLEAGKDPSFPRITVLKPYKDNLEVQGKKEASGPQPADPLPFG
EPCTALPRDPPQPGLPGTRPVPPAALPTYSTHLQGPAGSYTTVTATASVTVALHPTLPGS
YPTFSPEGFTSSEQDCLDEPSTSGTAVPDTFEMQNMGHHRAGAWR
NT seq 4098 nt   +upstreamnt  +downstreamnt
atgccggccgagcccccccgcgccgcgccgccgccgctccgcgccgcccgccgcaagccg
ctgcccgagggcagggccgtgggccagacgaccccgctgtggctgcgggcccgatttcag
gcgctgctcttcgccctgggttgccggatccagcggcactgcgggaaggtgcttttcgtg
gggctgctggtgttcggggcgctggccgtgggactgcgggtggcctccatcgagaccgac
atcgagcacctctgggtggaagcgggcagccgggtgagccaggagctgcgctacaccaag
gagaagttgggcgaggagtccgtctacacctcccagatgttgatccagaccccgaagaag
gatggtgataacatcctgacacaggaggccctgcagctccacctcgaggcggccttggcc
gccagcaaggttcaagtctcactgtacggaaaatcgtgggatttgaacaagatctgctac
aagtcaggtgttcccatcattgagaatggcatgatcgagaggatgatagagaagctgttc
ccctgtgtgatcctgacaccgctggactgcttctgggaaggctccaagctgcagggaggc
tcagcctatctcccgggccgcccggacatccagtggagcaacctgaaccctctgcagctg
atggaggagctgggccagttcacatccctggaaggcttcaaagagctgctagacaaggca
gaagtgggacaggcttacatggagcggccctgcctggacccccgggacccccagtgtccc
tccagtgctcccaacaagcagagccagcagagccctgacatcccggccgaactctcgggg
ggctgccacggcttctccaggaagttcatgcgctggcagcaggagctgattttaggcggc
acaaccaaagactcccagggcaagctgctacgccggtcccagcgaggtgcatgcctgtcc
cccagcgccgaggccctgcagaccatgttcctcctcatgagcccccggcagctctatgag
cacttcaaggatgactacgagatccatgatatcagctggagcgaggagaaggcaggagcc
atcctggaggcctggcagaggaaatttgtagagctggcacaggactccatccctcccaat
gccacacagagtgtccatgctttctccaccactacactcaatgacatcatgaagtccttc
tctgacgtcagcgtcatccgggtggctgggggctacctcctcatgctggcctatgcctgt
gtcaccatgctgcggtgggactgctccaagtcccaaggggctgtgggcctggctggggtc
ctgcttgtggctctctccgtcgcctctggcctggggctttgctcgctgctgggcatctcc
ttcaatgcagccaccacacaggtcctgcccttcctggcccttggcattggggtggatgac
atgttcctcttggctcacgccttcacggagacaagccaccacatccccttcaaggagcgg
acaggtgagtgtctgaagcgcacagggaccagtgtggctctcacctctgtcagcaacatg
atcgccttcttcatggcagccctggtgcccatccctgccctgcgtgccttctccctccag
gctgcagtcgttgttgtgttcaacttcgccatggtgctctttgttttccctgctatcctg
agcctggacctgcaccgccgggagaaacgccggctcgacatcctctgctgcttctacagc
ccttgctcctcaagggtcatccagatccagccccaagagcttgctgacgccaacgacaac
catgcttgccacccatctccttatgggcaccccggcatggccaccagcacccagatcacc
accactgtgcaagccttcacccggtgtgacccctcgggccaccacattgtcaccgtcctg
ccacccacctcccaggtgtgcacctcacctgccatcgtcctgccccacagtgaccccttg
ggctctcaggtcttcgccccatccagctccacccgggatctgctgtcccagctggatgag
gccaagggcgggcgggagtgcgtccccctgcccttctgccgctggagcctcgctgatttt
gcccgggagaagtacgccccactccttctgcgcacccggaccaaggtggtagtggcggtg
ctgttcctggcactgctagggctgagcctctatggcaccaccatggtacacgatggcctc
tacctgacggacatcgtgccacgggacaccaaggcacacgccttcatctcggcccagttc
aagtacttctccttctacaacatgttcattgtcactaagggtggcttccactacccgggt
gcccaggctgctctgctgagcctgcaccaggccttcagcaccgtcaagtacgtggtgcgg
gagggcaaccgcgacctgcctaaaatgtggctccattacttccaggactggctgcgaggg
ctccaggccaccttcgacagggactggcaggccgggcgcatcacccatgatagctaccgc
aatggctctgaggatggggcactggcctacaagctcctcatccagactggcaacaagaag
gagcccttcaacttcaaccagctgaccacgcggcgactggtggacgagaatggcatcatc
ccccctgacaccttctacatctgcctgacagtgtgggccagcaacgaccccctgggcttt
gccgcctcccaggccaacttctaccccccgcctcccgagtggattcatgacaagtacgac
accacgggcgagaacctgcgaatcccagcagcccagccgctggagttcgcccagttccct
ttctacctgagcgggctgcgtcgcacgtccgacttcgtggaggcgattgagagcgtacgg
gccatctgccaggaggccgcccagcgccacggcgtgctgagctaccccagcggctacccc
ttcctcttctgggagcagtacatcggcctgcggcactggttcctgctggccatcagcatc
ctgctggcctgcaccttcctcgtctgcgccttgctgctgctcaacccctggaccgccggc
atcatcgtctccatcctggccatgattgctgtggaattgtttggcatcatggggctgatg
ggcatcaagctgagcgccatccctgtggtcatcctcattgcctcggtgggcatcggagtg
gagtttactgtccacgtggccctgggcttcctgacagctgcggggagcaggaacgtgcgc
tcagccgcagcattggagcacacttttgcgcctgtgatggatggtgctgtctccaccctc
ctgggtgtcctcatgctggctggctctgagtttgatttcatcatgaggtatttctttgcg
gtgctgaccatcctgacgctgctggggctgctcaacgggctggtgctgctgcctgtgctg
ctctctgtcatcgggccaccccctgaggcatccctggtggataatggcccctgcctaccc
ccaccagagtcgatacccccatgtctgggccctgggggactgtacgtccggcgcactcca
gcctggccctccaccttccctgagccctccgacacggagcactacacagagagcatgggg
ccaggcagcccacggggtcccttcgttgtgccccctgccccagcacacatcctactggag
gctggcaaggaccccagcttcccccgcatcactgtgctgaagccctacaaggacaacctg
gaggttcaggggaagaaagaggcttctggccctcagcctgcagaccccctgcccttcgga
gagccgtgcaccgcgctgccccgagatcccccgcagcccggcctgccgggcacccggcca
gtgccccccgcagccctgcccacctacagcacccacctgcagggtcctgccggcagctac
accacggtgacggccaccgcatcagtgacagtggccctgcaccccacactgcctggctcc
taccccaccttcagccctgagggcttcaccagcagtgagcaggactgcctggatgagccc
agcaccagcggcaccgcagtgcccgacacctttgagatgcagaacatgggacaccacagg
gcaggtgcctggcgctag

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