Anomalospiza imberbis (cuckoo-finch): 137478618
Help
Entry
137478618 CDS
T11605
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
137478618 (PTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
137478618
NCBI-ProteinID:
XP_068054689
LinkDB
All DBs
Position
9:complement(21763376..21784913)
Genome browser
AA seq
1365 aa
AA seq
DB search
MPAEPPRAAPPPLRAARRKPLPEGRAVGQTTPLWLRARFQALLFALGCRIQRHCGKVLFV
GLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKK
DGDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLF
PCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLNPLQLMEELGQFTSLEGFKELLDKA
EVGQAYMERPCLDPRDPQCPSSAPNKQSQQSPDIPAELSGGCHGFSRKFMRWQQELILGG
TTKDSQGKLLRRSQRGACLSPSAEALQTMFLLMSPRQLYEHFKDDYEIHDISWSEEKAGA
ILEAWQRKFVELAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLLMLAYAC
VTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIGVDD
MFLLAHAFTETSHHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPALRAFSLQ
AAVVVVFNFAMVLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQELADANDN
HACHPSPYGHPGMATSTQITTTVQAFTRCDPSGHHIVTVLPPTSQVCTSPAIVLPHSDPL
GSQVFAPSSSTRDLLSQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRTKVVVAV
LFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKGGFHYPG
AQAALLSLHQAFSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRITHDSYR
NGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWASNDPLGF
AASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVEAIESVR
AICQEAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLLLNPWTAG
IIVSILAMIAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAAGSRNVR
SAAALEHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGLVLLPVL
LSVIGPPPEASLVDNGPCLPPPESIPPCLGPGGLYVRRTPAWPSTFPEPSDTEHYTESMG
PGSPRGPFVVPPAPAHILLEAGKDPSFPRITVLKPYKDNLEVQGKKEASGPQPADPLPFG
EPCTALPRDPPQPGLPGTRPVPPAALPTYSTHLQGPAGSYTTVTATASVTVALHPTLPGS
YPTFSPEGFTSSEQDCLDEPSTSGTAVPDTFEMQNMGHHRAGAWR
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgagcccccccgcgccgcgccgccgccgctccgcgccgcccgccgcaagccg
ctgcccgagggcagggccgtgggccagacgaccccgctgtggctgcgggcccgatttcag
gcgctgctcttcgccctgggttgccggatccagcggcactgcgggaaggtgcttttcgtg
gggctgctggtgttcggggcgctggccgtgggactgcgggtggcctccatcgagaccgac
atcgagcacctctgggtggaagcgggcagccgggtgagccaggagctgcgctacaccaag
gagaagttgggcgaggagtccgtctacacctcccagatgttgatccagaccccgaagaag
gatggtgataacatcctgacacaggaggccctgcagctccacctcgaggcggccttggcc
gccagcaaggttcaagtctcactgtacggaaaatcgtgggatttgaacaagatctgctac
aagtcaggtgttcccatcattgagaatggcatgatcgagaggatgatagagaagctgttc
ccctgtgtgatcctgacaccgctggactgcttctgggaaggctccaagctgcagggaggc
tcagcctatctcccgggccgcccggacatccagtggagcaacctgaaccctctgcagctg
atggaggagctgggccagttcacatccctggaaggcttcaaagagctgctagacaaggca
gaagtgggacaggcttacatggagcggccctgcctggacccccgggacccccagtgtccc
tccagtgctcccaacaagcagagccagcagagccctgacatcccggccgaactctcgggg
ggctgccacggcttctccaggaagttcatgcgctggcagcaggagctgattttaggcggc
acaaccaaagactcccagggcaagctgctacgccggtcccagcgaggtgcatgcctgtcc
cccagcgccgaggccctgcagaccatgttcctcctcatgagcccccggcagctctatgag
cacttcaaggatgactacgagatccatgatatcagctggagcgaggagaaggcaggagcc
atcctggaggcctggcagaggaaatttgtagagctggcacaggactccatccctcccaat
gccacacagagtgtccatgctttctccaccactacactcaatgacatcatgaagtccttc
tctgacgtcagcgtcatccgggtggctgggggctacctcctcatgctggcctatgcctgt
gtcaccatgctgcggtgggactgctccaagtcccaaggggctgtgggcctggctggggtc
ctgcttgtggctctctccgtcgcctctggcctggggctttgctcgctgctgggcatctcc
ttcaatgcagccaccacacaggtcctgcccttcctggcccttggcattggggtggatgac
atgttcctcttggctcacgccttcacggagacaagccaccacatccccttcaaggagcgg
acaggtgagtgtctgaagcgcacagggaccagtgtggctctcacctctgtcagcaacatg
atcgccttcttcatggcagccctggtgcccatccctgccctgcgtgccttctccctccag
gctgcagtcgttgttgtgttcaacttcgccatggtgctctttgttttccctgctatcctg
agcctggacctgcaccgccgggagaaacgccggctcgacatcctctgctgcttctacagc
ccttgctcctcaagggtcatccagatccagccccaagagcttgctgacgccaacgacaac
catgcttgccacccatctccttatgggcaccccggcatggccaccagcacccagatcacc
accactgtgcaagccttcacccggtgtgacccctcgggccaccacattgtcaccgtcctg
ccacccacctcccaggtgtgcacctcacctgccatcgtcctgccccacagtgaccccttg
ggctctcaggtcttcgccccatccagctccacccgggatctgctgtcccagctggatgag
gccaagggcgggcgggagtgcgtccccctgcccttctgccgctggagcctcgctgatttt
gcccgggagaagtacgccccactccttctgcgcacccggaccaaggtggtagtggcggtg
ctgttcctggcactgctagggctgagcctctatggcaccaccatggtacacgatggcctc
tacctgacggacatcgtgccacgggacaccaaggcacacgccttcatctcggcccagttc
aagtacttctccttctacaacatgttcattgtcactaagggtggcttccactacccgggt
gcccaggctgctctgctgagcctgcaccaggccttcagcaccgtcaagtacgtggtgcgg
gagggcaaccgcgacctgcctaaaatgtggctccattacttccaggactggctgcgaggg
ctccaggccaccttcgacagggactggcaggccgggcgcatcacccatgatagctaccgc
aatggctctgaggatggggcactggcctacaagctcctcatccagactggcaacaagaag
gagcccttcaacttcaaccagctgaccacgcggcgactggtggacgagaatggcatcatc
ccccctgacaccttctacatctgcctgacagtgtgggccagcaacgaccccctgggcttt
gccgcctcccaggccaacttctaccccccgcctcccgagtggattcatgacaagtacgac
accacgggcgagaacctgcgaatcccagcagcccagccgctggagttcgcccagttccct
ttctacctgagcgggctgcgtcgcacgtccgacttcgtggaggcgattgagagcgtacgg
gccatctgccaggaggccgcccagcgccacggcgtgctgagctaccccagcggctacccc
ttcctcttctgggagcagtacatcggcctgcggcactggttcctgctggccatcagcatc
ctgctggcctgcaccttcctcgtctgcgccttgctgctgctcaacccctggaccgccggc
atcatcgtctccatcctggccatgattgctgtggaattgtttggcatcatggggctgatg
ggcatcaagctgagcgccatccctgtggtcatcctcattgcctcggtgggcatcggagtg
gagtttactgtccacgtggccctgggcttcctgacagctgcggggagcaggaacgtgcgc
tcagccgcagcattggagcacacttttgcgcctgtgatggatggtgctgtctccaccctc
ctgggtgtcctcatgctggctggctctgagtttgatttcatcatgaggtatttctttgcg
gtgctgaccatcctgacgctgctggggctgctcaacgggctggtgctgctgcctgtgctg
ctctctgtcatcgggccaccccctgaggcatccctggtggataatggcccctgcctaccc
ccaccagagtcgatacccccatgtctgggccctgggggactgtacgtccggcgcactcca
gcctggccctccaccttccctgagccctccgacacggagcactacacagagagcatgggg
ccaggcagcccacggggtcccttcgttgtgccccctgccccagcacacatcctactggag
gctggcaaggaccccagcttcccccgcatcactgtgctgaagccctacaaggacaacctg
gaggttcaggggaagaaagaggcttctggccctcagcctgcagaccccctgcccttcgga
gagccgtgcaccgcgctgccccgagatcccccgcagcccggcctgccgggcacccggcca
gtgccccccgcagccctgcccacctacagcacccacctgcagggtcctgccggcagctac
accacggtgacggccaccgcatcagtgacagtggccctgcaccccacactgcctggctcc
taccccaccttcagccctgagggcttcaccagcagtgagcaggactgcctggatgagccc
agcaccagcggcaccgcagtgcccgacacctttgagatgcagaacatgggacaccacagg
gcaggtgcctggcgctag
DBGET
integrated database retrieval system